RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 IGLV11-55A0A075B6I3 123 aa12.05□□□□□ -0.48
PCDHA3-202ENST00000532566 NSUN5P1Q3KNT7 163 aa12.04□□□□□ -0.48
PCDHA3-202ENST00000532566 HLA-DMBP28068 263 aa12.04□□□□□ -0.48
PCDHA3-202ENST00000532566 OR13C6PQ8NH95 151 aa12.04□□□□□ -0.48
PCDHA3-202ENST00000532566 J3QLI3 93 aa12.04□□□□□ -0.48
PCDHA3-202ENST00000532566 DNAL4O96015 105 aa12.04□□□□□ -0.48
PCDHA3-202ENST00000532566 SAMD5Q5TGI4 173 aa12.04□□□□□ -0.48
PCDHA3-202ENST00000532566 Q8N8P6 123 aa12.04□□□□□ -0.48
PCDHA3-202ENST00000532566 LINC00574Q9H8X3 128 aa12.04□□□□□ -0.48
PCDHA3-202ENST00000532566 TRAV2A0A0B4J234 112 aa12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 ZNF124Q15973 351 aa12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 SIGLEC8Q9NYZ4 499 aa12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 DNAH12Q6ZR08 3092 aa12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 INSP01308 110 aa12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 NAA38Q9BRA0 125 aaKnown RBP12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 MRPL36Q9P0J6 103 aaKnown RBP12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 IGHV3-64A0A075B6Q5 118 aa12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 TEX22C9J3V5 150 aa12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 SPINK13Q1W4C9 94 aa12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 TEX43Q6ZNM6 134 aa12.03□□□□□ -0.48
PCDHA3-202ENST00000532566 TRGV1A0A0A0MS02 117 aa12.02□□□□□ -0.48
PCDHA3-202ENST00000532566 IGLL1P15814 213 aa12.02□□□□□ -0.48
PCDHA3-202ENST00000532566 RPL36AP83881 106 aaKnown RBP12.02□□□□□ -0.48
PCDHA3-202ENST00000532566 RPL36ALQ969Q0 106 aaKnown RBP12.02□□□□□ -0.48
PCDHA3-202ENST00000532566 H3BUA1 57 aa12.02□□□□□ -0.49
PCDHA3-202ENST00000532566 NPYP01303 97 aa12.02□□□□□ -0.49
PCDHA3-202ENST00000532566 ANXA2RQ3ZCQ2 193 aa12.02□□□□□ -0.49
PCDHA3-202ENST00000532566 DYNAPQ8N1N2 210 aa12.02□□□□□ -0.49
PCDHA3-202ENST00000532566 PLXNB1O43157 2135 aa12.02□□□□□ -0.49
PCDHA3-202ENST00000532566 IGF2BP2-AS1Q96M15 143 aa12.02□□□□□ -0.49
PCDHA3-202ENST00000532566 CDPF1Q6NVV7 123 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 LURAP1LQ8IV03 231 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 AGPAT4-IT1Q9H0P7 198 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 IGHV4-61A0A0C4DH41 118 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 IGHV7-4-1A0A0J9YVY3 117 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 C22orf34Q6ZV56 151 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 CD5LO43866 347 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 C2orf66Q6UXQ4 117 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 CTSGP08311 255 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 EGR2P11161 476 aaPredicted RBP12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 HTN3P15516 51 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 DTX2Q86UW9 622 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 Q8N7P7 452 aa12.01□□□□□ -0.49
PCDHA3-202ENST00000532566 UTF1Q5T230 341 aa12□□□□□ -0.49
PCDHA3-202ENST00000532566 Q8N9W7 124 aa12□□□□□ -0.49
PCDHA3-202ENST00000532566 PLEKHB2Q96CS7 222 aa12□□□□□ -0.49
PCDHA3-202ENST00000532566 EIF4EBP1Q13541 118 aaPredicted RBP12□□□□□ -0.49
PCDHA3-202ENST00000532566 KLF5Q13887 457 aaPredicted RBP12□□□□□ -0.49
PCDHA3-202ENST00000532566 UBE2E2Q96LR5 201 aa12□□□□□ -0.49
PCDHA3-202ENST00000532566 LGALS9BQ3B8N2 356 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 LGALS9CQ6DKI2 356 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 TRPT1Q86TN4 253 aaKnown RBP11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 CHCHD5Q9BSY4 110 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 TMEM238C9JI98 176 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 KIR3DS1Q14943 382 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 TCTEX1D4Q5JR98 221 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 MRPL53Q96EL3 112 aaKnown RBP11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 MEGF9Q9H1U4 602 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 CHD8Q9HCK8 2581 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 Q96MF0 132 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 CHAC1Q9BUX1 264 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 IGHV4-39P01824 125 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 CRYGCP07315 174 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 UBE2V1Q13404 147 aa11.99□□□□□ -0.49
PCDHA3-202ENST00000532566 ADARB2-AS1A8MUL3 147 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 LENEPQ9Y5L5 61 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 IGHV1OR15-1A0A075B7D0 117 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 ELANEP08246 267 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 CDKN1BP46527 198 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 C1QTNF4Q9BXJ3 329 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 RBAKDNA6NC62 111 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 LINC01619G3V211 115 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 KLF12Q9Y4X4 402 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 WNK1Q9H4A3 2382 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 CEP350Q5VT06 3117 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 TRAV26-2A0A0B4J265 109 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 NUPR1O60356 82 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 SMIM2Q9BVW6 85 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 COX11Q9Y6N1 276 aa11.98□□□□□ -0.49
PCDHA3-202ENST00000532566 TP53TG1Q9Y2A0 90 aa11.97□□□□□ -0.49
PCDHA3-202ENST00000532566 KLK9Q9UKQ9 250 aa11.97□□□□□ -0.49
PCDHA3-202ENST00000532566 IGHV3-53P01767 116 aa11.97□□□□□ -0.49
PCDHA3-202ENST00000532566 RHODO00212 210 aa11.96□□□□□ -0.49
PCDHA3-202ENST00000532566 ZFP36P26651 326 aaKnown RBP11.96□□□□□ -0.49
PCDHA3-202ENST00000532566 DEFB112Q30KQ8 113 aa11.96□□□□□ -0.49
PCDHA3-202ENST00000532566 UTRNP46939 3433 aa11.96□□□□□ -0.49
PCDHA3-202ENST00000532566 SDHAF1A6NFY7 115 aa11.96□□□□□ -0.5
PCDHA3-202ENST00000532566 IGHV4-59P01825 116 aa11.96□□□□□ -0.5
PCDHA3-202ENST00000532566 RPL35AP18077 110 aaKnown RBP11.96□□□□□ -0.5
PCDHA3-202ENST00000532566 C1orf229Q6ZS94 237 aaPredicted RBP11.96□□□□□ -0.5
PCDHA3-202ENST00000532566 PRADC1Q9BSG0 188 aa11.96□□□□□ -0.5
PCDHA3-202ENST00000532566 A0A0U1RRA0 63 aa11.96□□□□□ -0.5
PCDHA3-202ENST00000532566 BUB3O43684 328 aa11.96□□□□□ -0.5
PCDHA3-202ENST00000532566 TRAV12-2A0A075B6T6 113 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 IGHV4-30-2A0A087WSY4 118 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 KNCNA6PVL3 124 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 ERG28Q9UKR5 140 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 TRBV7-9A0A0J9YWB2 115 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 IGHV4-38-2P0DP08 117 aa11.95□□□□□ -0.5
PCDHA3-202ENST00000532566 COX8AP10176 69 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms