RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 NKX2-5P52952 324 aaPredicted RBP13.37□□□□□ -0.27
UBXN1-211ENST00000531056 RXFP4Q8TDU9 374 aa13.37□□□□□ -0.27
UBXN1-211ENST00000531056 PGPA6NDG6 321 aa13.36□□□□□ -0.27
UBXN1-211ENST00000531056 UMAD1C9J7I0 102 aa13.36□□□□□ -0.27
UBXN1-211ENST00000531056 ATP5G1P05496 136 aa13.36□□□□□ -0.27
UBXN1-211ENST00000531056 ATP5G3P48201 142 aa13.36□□□□□ -0.27
UBXN1-211ENST00000531056 ANXA2RQ3ZCQ2 193 aa13.36□□□□□ -0.27
UBXN1-211ENST00000531056 Q6ZQT7 251 aa13.36□□□□□ -0.27
UBXN1-211ENST00000531056 POM121L12Q8N7R1 296 aa13.36□□□□□ -0.27
UBXN1-211ENST00000531056 C11orf72Q8NBR9 251 aa13.36□□□□□ -0.27
UBXN1-211ENST00000531056 RAB24Q969Q5 203 aa13.36□□□□□ -0.27
UBXN1-211ENST00000531056 SNURFLB1AK76 121 aa13.35□□□□□ -0.27
UBXN1-211ENST00000531056 DAZ2Q13117 558 aaKnown RBP13.35□□□□□ -0.27
UBXN1-211ENST00000531056 EIF4E3Q8N5X7 224 aaKnown RBP13.35□□□□□ -0.27
UBXN1-211ENST00000531056 ARL6IP6Q8N6S5 226 aa13.35□□□□□ -0.27
UBXN1-211ENST00000531056 ZNF680Q8NEM1 530 aa13.35□□□□□ -0.27
UBXN1-211ENST00000531056 SUN5Q8TC36 379 aa13.35□□□□□ -0.27
UBXN1-211ENST00000531056 TMED6Q8WW62 240 aa13.35□□□□□ -0.27
UBXN1-211ENST00000531056 CTXND1A0A1B0GTU2 59 aa13.34□□□□□ -0.27
UBXN1-211ENST00000531056 F5H768 121 aa13.34□□□□□ -0.27
UBXN1-211ENST00000531056 FAM74A1Q5RGS3 127 aa13.34□□□□□ -0.27
UBXN1-211ENST00000531056 SSX7Q7RTT5 188 aa13.34□□□□□ -0.27
UBXN1-211ENST00000531056 C15orf53Q8NAA6 179 aa13.34□□□□□ -0.27
UBXN1-211ENST00000531056 LENEPQ9Y5L5 61 aa13.34□□□□□ -0.27
UBXN1-211ENST00000531056 FRAS1Q86XX4 4008 aa13.33□□□□□ -0.28
UBXN1-211ENST00000531056 GCHFRP30047 84 aa13.33□□□□□ -0.28
UBXN1-211ENST00000531056 CMTM2Q8TAZ6 248 aa13.33□□□□□ -0.28
UBXN1-211ENST00000531056 GSN-AS1Q9NRJ2 163 aa13.33□□□□□ -0.28
UBXN1-211ENST00000531056 RPH3ALQ9UNE2 315 aa13.33□□□□□ -0.28
UBXN1-211ENST00000531056 IGHV1OR15-1A0A075B7D0 117 aa13.32□□□□□ -0.28
UBXN1-211ENST00000531056 GAGE12BA1L429 117 aa13.32□□□□□ -0.28
UBXN1-211ENST00000531056 GAGE7O76087 117 aa13.32□□□□□ -0.28
UBXN1-211ENST00000531056 CXorf1O96002 111 aa13.32□□□□□ -0.28
UBXN1-211ENST00000531056 GAGE12FP0CL80 117 aa13.32□□□□□ -0.28
UBXN1-211ENST00000531056 GAGE12GP0CL81 117 aa13.32□□□□□ -0.28
UBXN1-211ENST00000531056 GAGE12IP0CL82 117 aa13.32□□□□□ -0.28
UBXN1-211ENST00000531056 DPPA3Q6W0C5 159 aa13.32□□□□□ -0.28
UBXN1-211ENST00000531056 GOLT1AQ6ZVE7 132 aa13.32□□□□□ -0.28
UBXN1-211ENST00000531056 TP53TG3Q9ULZ0 132 aa13.32□□□□□ -0.28
UBXN1-211ENST00000531056 RGS13O14921 159 aa13.31□□□□□ -0.28
UBXN1-211ENST00000531056 RAB5CP51148 216 aa13.31□□□□□ -0.28
UBXN1-211ENST00000531056 TCL1AP56279 114 aa13.31□□□□□ -0.28
UBXN1-211ENST00000531056 GNG5P63218 68 aa13.31□□□□□ -0.28
UBXN1-211ENST00000531056 ZNF726P1Q15940 193 aa13.31□□□□□ -0.28
UBXN1-211ENST00000531056 IBA57Q5T440 356 aaKnown RBP13.31□□□□□ -0.28
UBXN1-211ENST00000531056 Q6AWC8 147 aa13.31□□□□□ -0.28
UBXN1-211ENST00000531056 Q6ZTI0 123 aa13.31□□□□□ -0.28
UBXN1-211ENST00000531056 DNAH10Q8IVF4 4471 aa13.3□□□□□ -0.28
UBXN1-211ENST00000531056 RNF212Q495C1 297 aa13.3□□□□□ -0.28
UBXN1-211ENST00000531056 FAM213BQ8TBF2 198 aa13.3□□□□□ -0.28
UBXN1-211ENST00000531056 TMEM167BQ9NRX6 74 aa13.3□□□□□ -0.28
UBXN1-211ENST00000531056 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
UBXN1-211ENST00000531056 KLF12Q9Y4X4 402 aa13.3□□□□□ -0.28
UBXN1-211ENST00000531056 NACAE9PAV3 2078 aa13.3□□□□□ -0.28
UBXN1-211ENST00000531056 TRAV8-1A0A0A6YYK1 113 aa13.29□□□□□ -0.28
UBXN1-211ENST00000531056 MAP1LC3B2A6NCE7 125 aa13.29□□□□□ -0.28
UBXN1-211ENST00000531056 UBE2DNLQ8IWF7 75 aa13.29□□□□□ -0.28
UBXN1-211ENST00000531056 C18orf15Q96N68 181 aa13.29□□□□□ -0.28
UBXN1-211ENST00000531056 MAP1LC3BQ9GZQ8 125 aa13.29□□□□□ -0.28
UBXN1-211ENST00000531056 BIRC6Q9NR09 4857 aa13.29□□□□□ -0.28
UBXN1-211ENST00000531056 SPINK4O60575 86 aa13.28□□□□□ -0.28
UBXN1-211ENST00000531056 HOXA5P20719 270 aa13.28□□□□□ -0.28
UBXN1-211ENST00000531056 FHITP49789 147 aa13.28□□□□□ -0.28
UBXN1-211ENST00000531056 SULT1A2P50226 295 aa13.28□□□□□ -0.28
UBXN1-211ENST00000531056 IQCF2Q8IXL9 164 aa13.28□□□□□ -0.28
UBXN1-211ENST00000531056 C5orf17Q8NAS9 161 aa13.28□□□□□ -0.28
UBXN1-211ENST00000531056 TVP23CQ96ET8 276 aa13.28□□□□□ -0.28
UBXN1-211ENST00000531056 TMPRSS5Q9H3S3 457 aa13.28□□□□□ -0.28
UBXN1-211ENST00000531056 SERTM2A0A1B0GWG4 89 aa13.27□□□□□ -0.29
UBXN1-211ENST00000531056 GGTLC3B5MD39 225 aa13.27□□□□□ -0.29
UBXN1-211ENST00000531056 TCRAP04437 139 aa13.27□□□□□ -0.29
UBXN1-211ENST00000531056 MUC21Q5SSG8 566 aa13.27□□□□□ -0.29
UBXN1-211ENST00000531056 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
UBXN1-211ENST00000531056 NUDT3O95989 172 aa13.26□□□□□ -0.29
UBXN1-211ENST00000531056 FGF8P55075 233 aaPredicted RBP13.26□□□□□ -0.29
UBXN1-211ENST00000531056 MBD3L1Q8WWY6 194 aa13.26□□□□□ -0.29
UBXN1-211ENST00000531056 TRAV26-1A0A087WT03 109 aa13.25□□□□□ -0.29
UBXN1-211ENST00000531056 F6UZH7 168 aa13.25□□□□□ -0.29
UBXN1-211ENST00000531056 H2AFB1P0C5Y9 115 aa13.25□□□□□ -0.29
UBXN1-211ENST00000531056 SUMO1P63165 101 aaKnown RBP13.25□□□□□ -0.29
UBXN1-211ENST00000531056 ZNF415Q09FC8 603 aa13.25□□□□□ -0.29
UBXN1-211ENST00000531056 OR5I1Q13606 314 aa13.25□□□□□ -0.29
UBXN1-211ENST00000531056 SFT2D1Q8WV19 159 aa13.25□□□□□ -0.29
UBXN1-211ENST00000531056 TRGV2A0A075B6R0 118 aa13.24□□□□□ -0.29
UBXN1-211ENST00000531056 A0A1W2PRE2 83 aa13.24□□□□□ -0.29
UBXN1-211ENST00000531056 TEX46H3BTG2 121 aa13.24□□□□□ -0.29
UBXN1-211ENST00000531056 FAM3BP58499 235 aaPredicted RBP13.24□□□□□ -0.29
UBXN1-211ENST00000531056 LGALS9BQ3B8N2 356 aa13.24□□□□□ -0.29
UBXN1-211ENST00000531056 TDRG1Q3Y452 100 aa13.24□□□□□ -0.29
UBXN1-211ENST00000531056 ALKAL2Q6UX46 152 aa13.24□□□□□ -0.29
UBXN1-211ENST00000531056 SGK494Q96LW2 274 aa13.24□□□□□ -0.29
UBXN1-211ENST00000531056 TREM1Q9NP99 234 aa13.24□□□□□ -0.29
UBXN1-211ENST00000531056 EPDR1Q9UM22 224 aa13.24□□□□□ -0.29
UBXN1-211ENST00000531056 IGLV2-11P01706 119 aa13.23□□□□□ -0.29
UBXN1-211ENST00000531056 FAM159AQ6UWV7 190 aa13.23□□□□□ -0.29
UBXN1-211ENST00000531056 Q6ZR54 194 aa13.23□□□□□ -0.29
UBXN1-211ENST00000531056 MRPL16Q9NX20 251 aaKnown RBP13.23□□□□□ -0.29
UBXN1-211ENST00000531056 MDFICQ9P1T7 246 aa13.23□□□□□ -0.29
UBXN1-211ENST00000531056 TRGV11A0A075B6L2 103 aa13.22□□□□□ -0.29
UBXN1-211ENST00000531056 TRAV21A0A0B4J279 112 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms