RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 Q6ZQT7 251 aa10.05□□□□□ -0.8
CAPN1-216ENST00000528739 Q6ZTI0 123 aa10.05□□□□□ -0.8
CAPN1-216ENST00000528739 KLF12Q9Y4X4 402 aa10.05□□□□□ -0.8
CAPN1-216ENST00000528739 TRAV26-1A0A087WT03 109 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 SMLR1H3BR10 107 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 CXorf1O96002 111 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 STAG3L2P0CL84 134 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 STAG3L3P0CL85 134 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 GCHFRP30047 84 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 RNF212Q495C1 297 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 AKR1C8PQ5T2L2 129 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 FAM159AQ6UWV7 190 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 SGK494Q96LW2 274 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 LINC00467Q9BRT7 94 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 TMPRSS5Q9H3S3 457 aa10.04□□□□□ -0.8
CAPN1-216ENST00000528739 EPPK1P58107 5090 aaKnown RBP10.04□□□□□ -0.8
CAPN1-216ENST00000528739 TRBV7-9A0A0J9YWB2 115 aa10.03□□□□□ -0.8
CAPN1-216ENST00000528739 K7EQM0 130 aa10.03□□□□□ -0.8
CAPN1-216ENST00000528739 CCL18P55774 89 aa10.03□□□□□ -0.8
CAPN1-216ENST00000528739 ZNF415Q09FC8 603 aa10.03□□□□□ -0.8
CAPN1-216ENST00000528739 NDFIP1Q9BT67 221 aa10.03□□□□□ -0.8
CAPN1-216ENST00000528739 TREM1Q9NP99 234 aa10.03□□□□□ -0.8
CAPN1-216ENST00000528739 TMEM167BQ9NRX6 74 aa10.03□□□□□ -0.8
CAPN1-216ENST00000528739 MRPL16Q9NX20 251 aaKnown RBP10.03□□□□□ -0.8
CAPN1-216ENST00000528739 LENEPQ9Y5L5 61 aa10.03□□□□□ -0.8
CAPN1-216ENST00000528739 TRAV8-1A0A0A6YYK1 113 aa10.02□□□□□ -0.81
CAPN1-216ENST00000528739 F6UZH7 168 aa10.02□□□□□ -0.81
CAPN1-216ENST00000528739 TAAR5O14804 337 aa10.02□□□□□ -0.81
CAPN1-216ENST00000528739 IGHV3-53P01767 116 aa10.02□□□□□ -0.81
CAPN1-216ENST00000528739 TCL1AP56279 114 aa10.02□□□□□ -0.81
CAPN1-216ENST00000528739 SUMO1P63165 101 aaKnown RBP10.02□□□□□ -0.81
CAPN1-216ENST00000528739 TMEM183BQ1AE95 376 aa10.02□□□□□ -0.81
CAPN1-216ENST00000528739 IBA57Q5T440 356 aaKnown RBP10.02□□□□□ -0.81
CAPN1-216ENST00000528739 SSX7Q7RTT5 188 aa10.02□□□□□ -0.81
CAPN1-216ENST00000528739 TMEM183AQ8IXX5 376 aa10.02□□□□□ -0.81
CAPN1-216ENST00000528739 C11orf72Q8NBR9 251 aa10.02□□□□□ -0.81
CAPN1-216ENST00000528739 ST6GAL2Q96JF0 529 aa10.02□□□□□ -0.81
CAPN1-216ENST00000528739 HOXA5P20719 270 aa10.01□□□□□ -0.81
CAPN1-216ENST00000528739 LINC00612Q8N6U2 182 aa10.01□□□□□ -0.81
CAPN1-216ENST00000528739 C5orf17Q8NAS9 161 aa10.01□□□□□ -0.81
CAPN1-216ENST00000528739 TMED6Q8WW62 240 aa10.01□□□□□ -0.81
CAPN1-216ENST00000528739 TRGV11A0A075B6L2 103 aa10□□□□□ -0.81
CAPN1-216ENST00000528739 TRAV21A0A0B4J279 112 aa10□□□□□ -0.81
CAPN1-216ENST00000528739 SERTM2A0A1B0GWG4 89 aa10□□□□□ -0.81
CAPN1-216ENST00000528739 SPINK4O60575 86 aa10□□□□□ -0.81
CAPN1-216ENST00000528739 IFNA7P01567 189 aa10□□□□□ -0.81
CAPN1-216ENST00000528739 FGF8P55075 233 aaPredicted RBP10□□□□□ -0.81
CAPN1-216ENST00000528739 UBE2G2P60604 165 aa10□□□□□ -0.81
CAPN1-216ENST00000528739 ARL6IP6Q8N6S5 226 aa10□□□□□ -0.81
CAPN1-216ENST00000528739 CTXND1A0A1B0GTU2 59 aa9.99□□□□□ -0.81
CAPN1-216ENST00000528739 TCRAP04437 139 aa9.99□□□□□ -0.81
CAPN1-216ENST00000528739 LGALS9BQ3B8N2 356 aa9.99□□□□□ -0.81
CAPN1-216ENST00000528739 Q6AWC8 147 aa9.99□□□□□ -0.81
CAPN1-216ENST00000528739 PRNTQ86SH4 94 aa9.99□□□□□ -0.81
CAPN1-216ENST00000528739 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
CAPN1-216ENST00000528739 EPDR1Q9UM22 224 aa9.99□□□□□ -0.81
CAPN1-216ENST00000528739 VPS13DQ5THJ4 4388 aa9.98□□□□□ -0.81
CAPN1-216ENST00000528739 G3V3Q6 166 aa9.98□□□□□ -0.81
CAPN1-216ENST00000528739 GNRH2O43555 120 aa9.98□□□□□ -0.81
CAPN1-216ENST00000528739 FAM3BP58499 235 aaPredicted RBP9.98□□□□□ -0.81
CAPN1-216ENST00000528739 ZFP69Q49AA0 526 aa9.98□□□□□ -0.81
CAPN1-216ENST00000528739 SOHLH1Q5JUK2 328 aa9.98□□□□□ -0.81
CAPN1-216ENST00000528739 PSG8Q9UQ74 426 aa9.98□□□□□ -0.81
CAPN1-216ENST00000528739 BIRC6Q9NR09 4857 aa9.97□□□□□ -0.81
CAPN1-216ENST00000528739 TRGV4A0A0C4DH28 118 aa9.97□□□□□ -0.81
CAPN1-216ENST00000528739 PAX4O43316 350 aa9.97□□□□□ -0.81
CAPN1-216ENST00000528739 ZNF726P1Q15940 193 aa9.97□□□□□ -0.81
CAPN1-216ENST00000528739 LINC00336Q6ZUF6 198 aa9.97□□□□□ -0.81
CAPN1-216ENST00000528739 CYB561D1Q8N8Q1 229 aa9.97□□□□□ -0.81
CAPN1-216ENST00000528739 STOML3Q8TAV4 291 aa9.97□□□□□ -0.81
CAPN1-216ENST00000528739 TVP23CQ96ET8 276 aa9.97□□□□□ -0.81
CAPN1-216ENST00000528739 SDF2L1Q9HCN8 221 aa9.97□□□□□ -0.81
CAPN1-216ENST00000528739 LINC00588Q9Y4M8 146 aa9.97□□□□□ -0.81
CAPN1-216ENST00000528739 KANTRA0A1W2PQU2 76 aa9.96□□□□□ -0.82
CAPN1-216ENST00000528739 A0A1W2PRE2 83 aa9.96□□□□□ -0.82
CAPN1-216ENST00000528739 PRSS29PA6NIE9 313 aa9.96□□□□□ -0.82
CAPN1-216ENST00000528739 GGTLC3B5MD39 225 aa9.96□□□□□ -0.82
CAPN1-216ENST00000528739 PPT1P50897 306 aa9.96□□□□□ -0.82
CAPN1-216ENST00000528739 FLI1Q01543 452 aaPredicted RBP9.96□□□□□ -0.82
CAPN1-216ENST00000528739 SUN5Q8TC36 379 aa9.96□□□□□ -0.82
CAPN1-216ENST00000528739 KCNS1Q96KK3 526 aa9.96□□□□□ -0.82
CAPN1-216ENST00000528739 C8orf49Q96NF6 230 aa9.96□□□□□ -0.82
CAPN1-216ENST00000528739 SPXQ9BT56 116 aa9.96□□□□□ -0.82
CAPN1-216ENST00000528739 ZNF471Q9BX82 626 aaPredicted RBP9.96□□□□□ -0.82
CAPN1-216ENST00000528739 CYTL1Q9NRR1 136 aa9.96□□□□□ -0.82
CAPN1-216ENST00000528739 TRAV34A0A0B4J273 112 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 MAP1LC3B2A6NCE7 125 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 PFDN1O60925 122 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 GCGP01275 180 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 SLAQ13239 276 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 SMUG1Q53HV7 270 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 C1orf134Q5TEV5 83 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 KCNRGQ8N5I3 272 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 C18orf15Q96N68 181 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 MAP1LC3BQ9GZQ8 125 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 HHLA3Q9XRX5 114 aa9.95□□□□□ -0.82
CAPN1-216ENST00000528739 A0A0D9SG52 128 aa9.94□□□□□ -0.82
CAPN1-216ENST00000528739 H3BNG1 76 aa9.94□□□□□ -0.82
CAPN1-216ENST00000528739 TYMSP04818 313 aa9.94□□□□□ -0.82
CAPN1-216ENST00000528739 SFTA3P0C7M3 94 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms