RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 TMED6Q8WW62 240 aa13.51□□□□□ -0.25
PKP3-204ENST00000526971 LINC00467Q9BRT7 94 aa13.51□□□□□ -0.25
PKP3-204ENST00000526971 RPH3ALQ9UNE2 315 aa13.51□□□□□ -0.25
PKP3-204ENST00000526971 TIMM8BQ9Y5J9 83 aaPredicted RBP13.51□□□□□ -0.25
PKP3-204ENST00000526971 KANTRA0A1W2PQU2 76 aa13.5□□□□□ -0.25
PKP3-204ENST00000526971 GOLT1AQ6ZVE7 132 aa13.5□□□□□ -0.25
PKP3-204ENST00000526971 NOP10Q9NPE3 64 aaKnown RBP13.5□□□□□ -0.25
PKP3-204ENST00000526971 LENEPQ9Y5L5 61 aa13.5□□□□□ -0.25
PKP3-204ENST00000526971 DEFB130BP0DP73 79 aa13.49□□□□□ -0.25
PKP3-204ENST00000526971 DEFB130AP0DP74 79 aa13.49□□□□□ -0.25
PKP3-204ENST00000526971 GNG5P63218 68 aa13.49□□□□□ -0.25
PKP3-204ENST00000526971 LINC00336Q6ZUF6 198 aa13.49□□□□□ -0.25
PKP3-204ENST00000526971 IQCF2Q8IXL9 164 aa13.49□□□□□ -0.25
PKP3-204ENST00000526971 TCTE3Q8IZS6 198 aa13.49□□□□□ -0.25
PKP3-204ENST00000526971 C5orf17Q8NAS9 161 aa13.49□□□□□ -0.25
PKP3-204ENST00000526971 ZNF471Q9BX82 626 aaPredicted RBP13.49□□□□□ -0.25
PKP3-204ENST00000526971 SEC11BP0C7V7 166 aa13.48□□□□□ -0.25
PKP3-204ENST00000526971 HTN3P15516 51 aa13.48□□□□□ -0.25
PKP3-204ENST00000526971 TMUB2Q71RG4 321 aa13.48□□□□□ -0.25
PKP3-204ENST00000526971 SERTM2A0A1B0GWG4 89 aa13.47□□□□□ -0.25
PKP3-204ENST00000526971 A0A1W2PRE2 83 aa13.47□□□□□ -0.25
PKP3-204ENST00000526971 GGTLC3B5MD39 225 aa13.47□□□□□ -0.25
PKP3-204ENST00000526971 TCRAP04437 139 aa13.47□□□□□ -0.25
PKP3-204ENST00000526971 SUMO1P63165 101 aaKnown RBP13.47□□□□□ -0.25
PKP3-204ENST00000526971 ANXA2RQ3ZCQ2 193 aa13.47□□□□□ -0.25
PKP3-204ENST00000526971 Q6ZQT7 251 aa13.47□□□□□ -0.25
PKP3-204ENST00000526971 EIF4E3Q8N5X7 224 aaKnown RBP13.47□□□□□ -0.25
PKP3-204ENST00000526971 FAM210BQ96KR6 192 aa13.47□□□□□ -0.25
PKP3-204ENST00000526971 NDUFAF3Q9BU61 184 aa13.47□□□□□ -0.25
PKP3-204ENST00000526971 TMPRSS5Q9H3S3 457 aa13.47□□□□□ -0.25
PKP3-204ENST00000526971 TRAV8-1A0A0A6YYK1 113 aa13.46□□□□□ -0.25
PKP3-204ENST00000526971 MAP1LC3B2A6NCE7 125 aa13.46□□□□□ -0.25
PKP3-204ENST00000526971 CBY3A6NI87 242 aa13.46□□□□□ -0.25
PKP3-204ENST00000526971 SNURFLB1AK76 121 aa13.46□□□□□ -0.25
PKP3-204ENST00000526971 RGS13O14921 159 aa13.46□□□□□ -0.25
PKP3-204ENST00000526971 RTL8CO15255 209 aa13.46□□□□□ -0.25
PKP3-204ENST00000526971 PFDN1O60925 122 aa13.46□□□□□ -0.25
PKP3-204ENST00000526971 FGF8P55075 233 aaPredicted RBP13.46□□□□□ -0.25
PKP3-204ENST00000526971 EIF5AP63241 154 aaKnown RBP13.46□□□□□ -0.25
PKP3-204ENST00000526971 ZNF680Q8NEM1 530 aa13.46□□□□□ -0.25
PKP3-204ENST00000526971 MAP1LC3BQ9GZQ8 125 aa13.46□□□□□ -0.25
PKP3-204ENST00000526971 EPDR1Q9UM22 224 aa13.46□□□□□ -0.25
PKP3-204ENST00000526971 IGHV1OR15-1A0A075B7D0 117 aa13.45□□□□□ -0.26
PKP3-204ENST00000526971 UMAD1C9J7I0 102 aa13.45□□□□□ -0.26
PKP3-204ENST00000526971 DAZ2Q13117 558 aaKnown RBP13.45□□□□□ -0.26
PKP3-204ENST00000526971 Q6AWC8 147 aa13.45□□□□□ -0.26
PKP3-204ENST00000526971 LINC00612Q8N6U2 182 aa13.45□□□□□ -0.26
PKP3-204ENST00000526971 TVP23CQ96ET8 276 aa13.45□□□□□ -0.26
PKP3-204ENST00000526971 K7EQM0 130 aa13.44□□□□□ -0.26
PKP3-204ENST00000526971 FHITP49789 147 aa13.44□□□□□ -0.26
PKP3-204ENST00000526971 C11orf72Q8NBR9 251 aa13.44□□□□□ -0.26
PKP3-204ENST00000526971 GSN-AS1Q9NRJ2 163 aa13.44□□□□□ -0.26
PKP3-204ENST00000526971 hCG_2014768A0A024R1R8 64 aa13.43□□□□□ -0.26
PKP3-204ENST00000526971 ATP5G1P05496 136 aa13.43□□□□□ -0.26
PKP3-204ENST00000526971 MED14OSP0DP75 135 aa13.43□□□□□ -0.26
PKP3-204ENST00000526971 TPT1P13693 172 aaKnown RBP13.43□□□□□ -0.26
PKP3-204ENST00000526971 ATP5G3P48201 142 aa13.43□□□□□ -0.26
PKP3-204ENST00000526971 UBE2G2P60604 165 aa13.43□□□□□ -0.26
PKP3-204ENST00000526971 LGALSLQ3ZCW2 172 aaPredicted RBP13.43□□□□□ -0.26
PKP3-204ENST00000526971 STOML3Q8TAV4 291 aa13.43□□□□□ -0.26
PKP3-204ENST00000526971 SGK494Q96LW2 274 aa13.43□□□□□ -0.26
PKP3-204ENST00000526971 TREM1Q9NP99 234 aa13.43□□□□□ -0.26
PKP3-204ENST00000526971 TP53TG3Q9ULZ0 132 aa13.43□□□□□ -0.26
PKP3-204ENST00000526971 PRSS29PA6NIE9 313 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 M0R2N4 97 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 C1QBP02746 253 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 IBA57Q5T440 356 aaKnown RBP13.42□□□□□ -0.26
PKP3-204ENST00000526971 TMEM88Q6PEY1 159 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 AKAP14Q86UN6 197 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 POM121L12Q8N7R1 296 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 CYB561D1Q8N8Q1 229 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 FAM213BQ8TBF2 198 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 ATG101Q9BSB4 218 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 NKX6-2Q9C056 277 aaPredicted RBP13.42□□□□□ -0.26
PKP3-204ENST00000526971 PSG8Q9UQ74 426 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 NACAE9PAV3 2078 aa13.42□□□□□ -0.26
PKP3-204ENST00000526971 GAGE12BA1L429 117 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 FAM74A7A6NL05 159 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 F5H768 121 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 GAGE7O76087 117 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 IGLV2-11P01706 119 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 GAGE12FP0CL80 117 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 GAGE12GP0CL81 117 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 GAGE12IP0CL82 117 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 TCL1AP56279 114 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 MUC21Q5SSG8 566 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 DPPA3Q6W0C5 159 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 MBD3L1Q8WWY6 194 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 NDFIP1Q9BT67 221 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 KLF12Q9Y4X4 402 aa13.41□□□□□ -0.26
PKP3-204ENST00000526971 FBLL1A6NHQ2 334 aaKnown RBP13.4□□□□□ -0.26
PKP3-204ENST00000526971 F6UZH7 168 aa13.4□□□□□ -0.26
PKP3-204ENST00000526971 IFNA7P01567 189 aa13.4□□□□□ -0.26
PKP3-204ENST00000526971 FLI1Q01543 452 aaPredicted RBP13.4□□□□□ -0.26
PKP3-204ENST00000526971 Q6ZTI0 123 aa13.4□□□□□ -0.26
PKP3-204ENST00000526971 TMEM75Q8N9X5 138 aa13.4□□□□□ -0.26
PKP3-204ENST00000526971 SFT2D1Q8WV19 159 aa13.4□□□□□ -0.26
PKP3-204ENST00000526971 HSPG2P98160 4391 aa13.4□□□□□ -0.26
PKP3-204ENST00000526971 TRAV21A0A0B4J279 112 aa13.39□□□□□ -0.27
PKP3-204ENST00000526971 P0DMU3 169 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms