RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 KNCNA6PVL3 124 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 A8MZ25 164 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 K7EN84 100 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 MT-ND4LP03901 98 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 HLA-DRB4P13762 266 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 GDF5OSQ5U4N7 250 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 PRR27Q6MZM9 219 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 COX8CQ7Z4L0 72 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 APRG1Q8IVJ8 170 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 DAZAP1Q96EP5 407 aaKnown RBP9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 ODF3Q96PU9 254 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 RPS10P5Q9NQ39 176 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 HLA-DRB4X5D2U9 266 aa9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 HUWE1Q7Z6Z7 4374 aaKnown RBP9.37□□□□□ -0.91
SSSCA1-203ENST00000526877 AGRNO00468 2067 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 C7orf77A4D0Y5 90 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 PPP1R2P9O14990 202 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 CD7P09564 240 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 IGHV4-30-4P0DP06 118 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 TSPOP30536 169 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 LEPP41159 167 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 ERVFC1-1P60608 527 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 OR5I1Q13606 314 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 STHQ8IWL8 128 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 C15orf54Q8N8G6 183 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 ANAPC16Q96DE5 110 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 ZC2HC1AQ96GY0 325 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 SFRP2Q96HF1 295 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 C8orf49Q96NF6 230 aa9.36□□□□□ -0.91
SSSCA1-203ENST00000526877 H3BMM0 161 aa9.35□□□□□ -0.91
SSSCA1-203ENST00000526877 IGKV3-20P01619 116 aa9.35□□□□□ -0.91
SSSCA1-203ENST00000526877 GPX1P07203 203 aa9.35□□□□□ -0.91
SSSCA1-203ENST00000526877 ZNF124Q15973 351 aa9.35□□□□□ -0.91
SSSCA1-203ENST00000526877 IBA57Q5T440 356 aaKnown RBP9.35□□□□□ -0.91
SSSCA1-203ENST00000526877 OR10G8Q8NGN5 311 aa9.35□□□□□ -0.91
SSSCA1-203ENST00000526877 FAM19A4Q96LR4 140 aa9.35□□□□□ -0.91
SSSCA1-203ENST00000526877 CTDSP1Q9GZU7 261 aa9.35□□□□□ -0.91
SSSCA1-203ENST00000526877 OSTCQ9NRP0 149 aa9.35□□□□□ -0.91
SSSCA1-203ENST00000526877 A0A087WWC5 75 aa9.34□□□□□ -0.91
SSSCA1-203ENST00000526877 FABP5P3A8MUU1 101 aa9.34□□□□□ -0.91
SSSCA1-203ENST00000526877 CRISP2P16562 243 aa9.34□□□□□ -0.91
SSSCA1-203ENST00000526877 RNF212Q495C1 297 aa9.34□□□□□ -0.91
SSSCA1-203ENST00000526877 FAM162BQ5T6X4 162 aa9.34□□□□□ -0.91
SSSCA1-203ENST00000526877 ATRAIDQ6UW56 229 aa9.34□□□□□ -0.91
SSSCA1-203ENST00000526877 FAM231DQ6ZW35 169 aa9.34□□□□□ -0.91
SSSCA1-203ENST00000526877 CLUHP3Q96NS8 147 aa9.34□□□□□ -0.91
SSSCA1-203ENST00000526877 RCHY1Q96PM5 261 aa9.34□□□□□ -0.91
SSSCA1-203ENST00000526877 TM2D3Q9BRN9 247 aa9.34□□□□□ -0.91
SSSCA1-203ENST00000526877 A8MTW9 85 aa9.33□□□□□ -0.92
SSSCA1-203ENST00000526877 H7BYZ3 331 aa9.33□□□□□ -0.92
SSSCA1-203ENST00000526877 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
SSSCA1-203ENST00000526877 P01737 135 aa9.33□□□□□ -0.92
SSSCA1-203ENST00000526877 NUDT10Q8NFP7 164 aa9.33□□□□□ -0.92
SSSCA1-203ENST00000526877 NUDT11Q96G61 164 aa9.33□□□□□ -0.92
SSSCA1-203ENST00000526877 RNASE7Q9H1E1 156 aaKnown RBP9.33□□□□□ -0.92
SSSCA1-203ENST00000526877 C19orf71A6NCJ1 209 aa9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 ZNF705GA8MUZ8 300 aaPredicted RBP9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 J3KRW8 73 aa9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 SH2D1AO60880 128 aa9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 AMBPP02760 352 aa9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 RNASE4P34096 147 aaKnown RBP9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 CDKN1BP46527 198 aa9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 CRIP1P50238 77 aa9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 NUTF2P61970 127 aaKnown RBP9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 ZFAND2AQ8N6M9 145 aa9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 TMEM242Q9NWH2 141 aa9.32□□□□□ -0.92
SSSCA1-203ENST00000526877 RYR3Q15413 4870 aa9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 TRAV21A0A0B4J279 112 aa9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 KLLNB2CW77 178 aa9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 PFN1P07737 140 aaKnown RBP9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 ZNF80P51504 273 aaPredicted RBP9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 SPINK13Q1W4C9 94 aa9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 AMTNQ6UX39 209 aa9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 LINC00322Q6ZN03 302 aaPredicted RBP9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 TRPT1Q86TN4 253 aaKnown RBP9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 DEFB125Q8N687 156 aa9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 RPP21Q9H633 154 aaKnown RBP9.31□□□□□ -0.92
SSSCA1-203ENST00000526877 C7orf71A4D174 169 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 TMEM189A5PLL7 270 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 C3orf84H3BNL1 204 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 M0R2Z0 102 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 FXYD7P58549 80 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 Q6AWC8 147 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 OR2D3Q8NGH3 330 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 WFDC10AQ9H1F0 79 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 ZMAT4Q9H898 229 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 SMCO4Q9NRQ5 59 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 V9GYV3 84 aa9.3□□□□□ -0.92
SSSCA1-203ENST00000526877 XKRY2A2RUG3 117 aa9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 RBMY1BA6NDE4 496 aaKnown RBP9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 CXorf65A6NEN9 183 aa9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 RBMY1EA6NEQ0 496 aaKnown RBP9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 A8MWL6 223 aa9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 SCO1O75880 301 aa9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 ORM1P02763 201 aa9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 RBMY1DP0C7P1 496 aaKnown RBP9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 S100PP25815 95 aa9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 RPS20P60866 119 aaKnown RBP9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 BTN1A1Q13410 526 aa9.29□□□□□ -0.92
SSSCA1-203ENST00000526877 CT83Q5H943 113 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms