RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 BLNKQ8WV28 456 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 TMEM18Q96B42 140 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 FAM167A-AS1Q96KT0 104 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 C2orf88Q9BSF0 95 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 RHPN1-AS1Q9BWJ2 59 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 IL36BQ9NZH7 164 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 SMPXQ9UHP9 88 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 RPH3ALQ9UNE2 315 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 RNF24Q9Y225 148 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 HYDINQ4G0P3 5121 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 MUC4Q99102 2169 aa4.85□□□□□ -1.63
NUP98-213ENST00000524563 TRAV25A0A0B4J276 109 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 IGHV3-66A0A0C4DH42 116 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 PGPA6NDG6 321 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 PGPEP1LA6NFU8 196 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 OR4C46A6NHA9 309 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 GGTLC3B5MD39 225 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 K7EN84 100 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 PEX7O00628 323 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 NBEAP1P0C6P0 100 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 MGST1P10620 155 aaKnown RBP4.84□□□□□ -1.63
NUP98-213ENST00000524563 TAS2R60P59551 318 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 RPL19P84098 196 aaKnown RBP4.84□□□□□ -1.63
NUP98-213ENST00000524563 Q0VG73 95 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 CENPWQ5EE01 88 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 CEMP1Q6PRD7 247 aaPredicted RBP4.84□□□□□ -1.63
NUP98-213ENST00000524563 LINC00322Q6ZN03 302 aaPredicted RBP4.84□□□□□ -1.63
NUP98-213ENST00000524563 MRPL52Q86TS9 123 aaKnown RBP4.84□□□□□ -1.63
NUP98-213ENST00000524563 BPIFA4PQ86YQ2 179 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 OCC1Q8TAD7 63 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 CMTM2Q8TAZ6 248 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 FXYD5Q96DB9 178 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 RNF125Q96EQ8 232 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 SPAG8Q99932 426 aaPredicted RBP4.84□□□□□ -1.63
NUP98-213ENST00000524563 OVOL2Q9BRP0 275 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 NDUFAF3Q9BU61 184 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 SLC25A39Q9BZJ4 359 aaPredicted RBP4.84□□□□□ -1.63
NUP98-213ENST00000524563 TP53TG3Q9ULZ0 132 aa4.84□□□□□ -1.63
NUP98-213ENST00000524563 IGKV3-7A0A075B6H7 116 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 H3BRN7 92 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 HIST1H1EP10412 219 aaKnown RBP4.83□□□□□ -1.64
NUP98-213ENST00000524563 LINC00310P59036 64 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 ERVFC1-1P60608 527 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 RANP62826 216 aaKnown RBP4.83□□□□□ -1.64
NUP98-213ENST00000524563 IQCJQ1A5X6 159 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 ODF3L2Q3SX64 289 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 COX19Q49B96 90 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 LEMD1Q68G75 181 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 TCF24Q7RTU0 167 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 ZNF664Q8N3J9 261 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 C5orf17Q8NAS9 161 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 IGF2BP2-AS1Q96M15 143 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 METTL26Q96S19 204 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 SHANK2-AS3Q9BTD1 123 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 GNB1LQ9BYB4 327 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 Q9H3A6 140 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 OSTCQ9NRP0 149 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 TMEM14CQ9P0S9 112 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 TP53TG1Q9Y2A0 90 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 TRAPPC1Q9Y5R8 145 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 U3KQE9 123 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 V9GYV3 84 aa4.83□□□□□ -1.64
NUP98-213ENST00000524563 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
NUP98-213ENST00000524563 A6NJY4 79 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 K7EQM0 130 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 ISLRO14498 428 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 IGLV2-8P01709 118 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 MT-ND6P03923 174 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 SNRPCP09234 159 aaKnown RBP4.82□□□□□ -1.64
NUP98-213ENST00000524563 TFPI2P48307 235 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 SSTP61278 116 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 GNG5P63218 68 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 PAFAH1B2P68402 229 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 ZNF124Q15973 351 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 C1orf194Q5T5A4 169 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 Q6ZWC4 215 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 BAGE2Q86Y30 109 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 PHLDA1Q8WV24 401 aaPredicted RBP4.82□□□□□ -1.64
NUP98-213ENST00000524563 GLMPQ8WWB7 406 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 FMC1Q96HJ9 113 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 ATG101Q9BSB4 218 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 OTORQ9NRC9 128 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 RABAC1Q9UI14 185 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 EPDR1Q9UM22 224 aa4.82□□□□□ -1.64
NUP98-213ENST00000524563 SMIM27A0A1W2PRY6 76 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 A0A1W2PS18 150 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 ZNF705GA8MUZ8 300 aaPredicted RBP4.81□□□□□ -1.64
NUP98-213ENST00000524563 H3BTX0 84 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 BUB3O43684 328 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 RPL7P18124 248 aaKnown RBP4.81□□□□□ -1.64
NUP98-213ENST00000524563 OR5I1Q13606 314 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 TMEM183BQ1AE95 376 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 IBA57Q5T440 356 aaKnown RBP4.81□□□□□ -1.64
NUP98-213ENST00000524563 PRR27Q6MZM9 219 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 WDR73Q6P4I2 378 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 RASL11AQ6T310 242 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 C16orf54Q6UWD8 224 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 TEX43Q6ZNM6 134 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 FAM231DQ6ZW35 169 aa4.81□□□□□ -1.64
NUP98-213ENST00000524563 TMEM256Q8N2U0 113 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms