RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 PLNP26678 52 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 TEX29Q8N6K0 151 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 IGKV2-40A0A087WW87 121 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 A0A087WX48 190 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 MYMXA0A1B0GTQ4 84 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 LINC01549A6NIU2 74 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 IGKV2D-40P01614 121 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 TEN1Q86WV5 123 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 PRR25Q96S07 402 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 OTOGLQ3ZCN5 2332 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 A0A087WWL8 130 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 CEACAM4O75871 244 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 CNTFRP26992 372 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 GLRXP35754 106 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 TMEM200BQ69YZ2 307 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 ZFP2Q6ZN57 461 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 Q8N8P6 123 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 PKDREJQ9NTG1 2253 aa7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 IGHG3P01860 377 aa7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 Q8TAT8 98 aa7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 CARD19Q96LW7 228 aa7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 SLC25A15Q9Y619 301 aa7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 KALRNO60229 2985 aa7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 IGHV1-46P01743 117 aa7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 ZNF80P51504 273 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 C22orf34Q6ZV56 151 aa7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 SEM1Q6ZVN7 128 aa7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 ZFHX2Q9C0A1 2572 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-230ENST00000521724 LINC01619G3V211 115 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 I3L2K1 104 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 PDE6HQ13956 83 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 LAGE3Q14657 143 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 DTX2Q86UW9 622 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 ZNF491Q8N8L2 437 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 SIGLEC9Q9Y336 463 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 TPRP12270 2363 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 IGLV3-9A0A075B6K5 115 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 LINC01548A6NM66 108 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 H3BVH4 76 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 MRPS12O15235 138 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 ZNF688P0C7X2 276 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 CCL8P80075 99 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 SRSF9Q13242 221 aaKnown RBP eCLIP7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 PPP1R27Q86WC6 154 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 PIEZO2Q9H5I5 2752 aa7.48□□□□□ -1.21
CTNNA1-230ENST00000521724 TMEM262E9PQX1 116 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 EFNA4P52798 201 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 LYRM7Q5U5X0 104 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 TEX36Q5VZQ5 186 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 SHISA2Q6UWI4 295 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 SCGB1D4Q6XE38 83 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 POLEQ07864 2286 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 IGLV2-18A0A075B6J9 118 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 TEX22C9J3V5 150 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 F8VRH5 84 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 H7C1H1 209 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 LGALS1P09382 135 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 TMEM78Q5T7P6 136 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 LINC00311Q8N616 119 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 CNFNQ9BYD5 112 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 RAXQ9Y2V3 346 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 CSMD1Q96PZ7 3565 aa7.47□□□□□ -1.21
CTNNA1-230ENST00000521724 A8MWV9 139 aa7.46□□□□□ -1.21
CTNNA1-230ENST00000521724 TNFRSF13BO14836 293 aaPredicted RBP7.46□□□□□ -1.21
CTNNA1-230ENST00000521724 COX8CQ7Z4L0 72 aa7.46□□□□□ -1.21
CTNNA1-230ENST00000521724 ZNF575Q86XF7 245 aa7.46□□□□□ -1.21
CTNNA1-230ENST00000521724 PEMTQ9UBM1 199 aa7.46□□□□□ -1.21
CTNNA1-230ENST00000521724 BSNQ9UPA5 3926 aa7.46□□□□□ -1.22
CTNNA1-230ENST00000521724 RPL11P62913 178 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-230ENST00000521724 ANXA2RQ3ZCQ2 193 aa7.46□□□□□ -1.22
CTNNA1-230ENST00000521724 KIR2DL4Q99706 377 aa7.46□□□□□ -1.22
CTNNA1-230ENST00000521724 TRBV7-9A0A0J9YWB2 115 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 FABP5P3A8MUU1 101 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 J3QL48 77 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 UBE2D3P61077 147 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 UBE2D2P62837 147 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 HERV-K104P63124 156 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 ZNF474Q6S9Z5 364 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 FBXL15Q9H469 300 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 TRAV26-2A0A0B4J265 109 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 ZNF815PA8K554 130 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 K7EIM0 57 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 NHLRC4P0CG21 123 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 EDN2P20800 178 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 UBE2D1P51668 147 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 C8orf31Q8N9H6 132 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 DEFB124Q8NES8 71 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 FANCD2OSQ96PS1 177 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 KLK15Q9H2R5 256 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 S4R3C0 116 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 RELNP78509 3460 aa7.45□□□□□ -1.22
CTNNA1-230ENST00000521724 TRBV20-1A0A075B6N2 111 aa7.44□□□□□ -1.22
CTNNA1-230ENST00000521724 FCN3O75636 299 aa7.44□□□□□ -1.22
CTNNA1-230ENST00000521724 CNIH1O95406 144 aa7.44□□□□□ -1.22
CTNNA1-230ENST00000521724 TCL1BO95988 128 aa7.44□□□□□ -1.22
CTNNA1-230ENST00000521724 CRYGBP07316 175 aa7.44□□□□□ -1.22
CTNNA1-230ENST00000521724 ANKRD29Q8N6D5 301 aa7.44□□□□□ -1.22
CTNNA1-230ENST00000521724 ZNF292O60281 2723 aa7.44□□□□□ -1.22
CTNNA1-230ENST00000521724 TRAV12-1A0A0B4J245 112 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms