RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ATP5G3P48201 142 aa14.56□□□□□ -0.08
TRIM35-203ENST00000521253 C11orf72Q8NBR9 251 aa14.56□□□□□ -0.08
TRIM35-203ENST00000521253 ZNF680Q8NEM1 530 aa14.56□□□□□ -0.08
TRIM35-203ENST00000521253 GSN-AS1Q9NRJ2 163 aa14.56□□□□□ -0.08
TRIM35-203ENST00000521253 IGHV1OR15-1A0A075B7D0 117 aa14.55□□□□□ -0.08
TRIM35-203ENST00000521253 A0A0D9SG52 128 aa14.55□□□□□ -0.08
TRIM35-203ENST00000521253 GGTLC3B5MD39 225 aa14.55□□□□□ -0.08
TRIM35-203ENST00000521253 F5H768 121 aa14.55□□□□□ -0.08
TRIM35-203ENST00000521253 DAZ2Q13117 558 aaKnown RBP14.55□□□□□ -0.08
TRIM35-203ENST00000521253 C5orf17Q8NAS9 161 aa14.55□□□□□ -0.08
TRIM35-203ENST00000521253 TP53TG3Q9ULZ0 132 aa14.55□□□□□ -0.08
TRIM35-203ENST00000521253 GAGE12BA1L429 117 aa14.54□□□□□ -0.08
TRIM35-203ENST00000521253 GAGE7O76087 117 aa14.54□□□□□ -0.08
TRIM35-203ENST00000521253 TCRAP04437 139 aa14.54□□□□□ -0.08
TRIM35-203ENST00000521253 GAGE12FP0CL80 117 aa14.54□□□□□ -0.08
TRIM35-203ENST00000521253 GAGE12GP0CL81 117 aa14.54□□□□□ -0.08
TRIM35-203ENST00000521253 GAGE12IP0CL82 117 aa14.54□□□□□ -0.08
TRIM35-203ENST00000521253 SUMO1P63165 101 aaKnown RBP14.54□□□□□ -0.08
TRIM35-203ENST00000521253 TMPRSS5Q9H3S3 457 aa14.54□□□□□ -0.08
TRIM35-203ENST00000521253 EPPK1P58107 5090 aaKnown RBP14.53□□□□□ -0.08
TRIM35-203ENST00000521253 BCL2L11O43521 198 aa14.53□□□□□ -0.08
TRIM35-203ENST00000521253 FGF8P55075 233 aaPredicted RBP14.53□□□□□ -0.08
TRIM35-203ENST00000521253 Q6AWC8 147 aa14.53□□□□□ -0.08
TRIM35-203ENST00000521253 Q6ZTI0 123 aa14.53□□□□□ -0.08
TRIM35-203ENST00000521253 TVP23CQ96ET8 276 aa14.53□□□□□ -0.08
TRIM35-203ENST00000521253 SGK494Q96LW2 274 aa14.53□□□□□ -0.08
TRIM35-203ENST00000521253 SERTM2A0A1B0GWG4 89 aa14.52□□□□□ -0.09
TRIM35-203ENST00000521253 KANTRA0A1W2PQU2 76 aa14.52□□□□□ -0.09
TRIM35-203ENST00000521253 A0A1W2PRE2 83 aa14.52□□□□□ -0.09
TRIM35-203ENST00000521253 P0DMU3 169 aa14.52□□□□□ -0.09
TRIM35-203ENST00000521253 FAM231AP0DMU4 169 aa14.52□□□□□ -0.09
TRIM35-203ENST00000521253 FAM231CP0DMU5 169 aa14.52□□□□□ -0.09
TRIM35-203ENST00000521253 MUC21Q5SSG8 566 aa14.52□□□□□ -0.09
TRIM35-203ENST00000521253 Q6ZNX1 250 aa14.52□□□□□ -0.09
TRIM35-203ENST00000521253 ZNF471Q9BX82 626 aaPredicted RBP14.52□□□□□ -0.09
TRIM35-203ENST00000521253 EPDR1Q9UM22 224 aa14.52□□□□□ -0.09
TRIM35-203ENST00000521253 KLF12Q9Y4X4 402 aa14.52□□□□□ -0.09
TRIM35-203ENST00000521253 DNAH10Q8IVF4 4471 aa14.51□□□□□ -0.09
TRIM35-203ENST00000521253 MAP1LC3B2A6NCE7 125 aa14.51□□□□□ -0.09
TRIM35-203ENST00000521253 FHITP49789 147 aa14.51□□□□□ -0.09
TRIM35-203ENST00000521253 TCL1AP56279 114 aa14.51□□□□□ -0.09
TRIM35-203ENST00000521253 IBA57Q5T440 356 aaKnown RBP14.51□□□□□ -0.09
TRIM35-203ENST00000521253 MAP1LC3BQ9GZQ8 125 aa14.51□□□□□ -0.09
TRIM35-203ENST00000521253 TREM1Q9NP99 234 aa14.51□□□□□ -0.09
TRIM35-203ENST00000521253 F6UZH7 168 aa14.5□□□□□ -0.09
TRIM35-203ENST00000521253 SEC11BP0C7V7 166 aa14.5□□□□□ -0.09
TRIM35-203ENST00000521253 UBE2G2P60604 165 aa14.5□□□□□ -0.09
TRIM35-203ENST00000521253 POM121L12Q8N7R1 296 aa14.5□□□□□ -0.09
TRIM35-203ENST00000521253 K7EQM0 130 aa14.49□□□□□ -0.09
TRIM35-203ENST00000521253 IGLV2-11P01706 119 aa14.49□□□□□ -0.09
TRIM35-203ENST00000521253 TMUB2Q71RG4 321 aa14.49□□□□□ -0.09
TRIM35-203ENST00000521253 CYB561D1Q8N8Q1 229 aa14.49□□□□□ -0.09
TRIM35-203ENST00000521253 C15orf53Q8NAA6 179 aa14.49□□□□□ -0.09
TRIM35-203ENST00000521253 PSG8Q9UQ74 426 aa14.49□□□□□ -0.09
TRIM35-203ENST00000521253 TRGV1A0A0A0MS02 117 aa14.48□□□□□ -0.09
TRIM35-203ENST00000521253 SPINK4O60575 86 aa14.48□□□□□ -0.09
TRIM35-203ENST00000521253 PFDN1O60925 122 aa14.48□□□□□ -0.09
TRIM35-203ENST00000521253 TCTE3Q8IZS6 198 aa14.48□□□□□ -0.09
TRIM35-203ENST00000521253 ATG101Q9BSB4 218 aa14.48□□□□□ -0.09
TRIM35-203ENST00000521253 NAGKQ9UJ70 344 aa14.48□□□□□ -0.09
TRIM35-203ENST00000521253 TRGV2A0A075B6R0 118 aa14.47□□□□□ -0.09
TRIM35-203ENST00000521253 TRAV21A0A0B4J279 112 aa14.47□□□□□ -0.09
TRIM35-203ENST00000521253 FAM74A7A6NL05 159 aa14.47□□□□□ -0.09
TRIM35-203ENST00000521253 HOXA5P20719 270 aa14.47□□□□□ -0.09
TRIM35-203ENST00000521253 FLI1Q01543 452 aaPredicted RBP14.47□□□□□ -0.09
TRIM35-203ENST00000521253 ZNF415Q09FC8 603 aa14.47□□□□□ -0.09
TRIM35-203ENST00000521253 OR5I1Q13606 314 aa14.47□□□□□ -0.09
TRIM35-203ENST00000521253 FAM159AQ6UWV7 190 aa14.47□□□□□ -0.09
TRIM35-203ENST00000521253 NDFIP1Q9BT67 221 aa14.47□□□□□ -0.09
TRIM35-203ENST00000521253 MDFICQ9P1T7 246 aa14.47□□□□□ -0.09
TRIM35-203ENST00000521253 UMAD1C9J7I0 102 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 IFNA7P01567 189 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 EIF5AP63241 154 aaKnown RBP14.46□□□□□ -0.09
TRIM35-203ENST00000521253 TMEM183BQ1AE95 376 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 TDRG1Q3Y452 100 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 PRNTQ86SH4 94 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 UBE2DNLQ8IWF7 75 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 TMEM183AQ8IXX5 376 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 TMEM75Q8N9X5 138 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 STOML3Q8TAV4 291 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 LINC00479Q96M42 142 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 C18orf15Q96N68 181 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 C8orf49Q96NF6 230 aa14.46□□□□□ -0.09
TRIM35-203ENST00000521253 NUDT3O95989 172 aa14.45□□□□□ -0.1
TRIM35-203ENST00000521253 LGALS9BQ3B8N2 356 aa14.45□□□□□ -0.1
TRIM35-203ENST00000521253 FAM213BQ8TBF2 198 aa14.45□□□□□ -0.1
TRIM35-203ENST00000521253 NKX6-2Q9C056 277 aaPredicted RBP14.45□□□□□ -0.1
TRIM35-203ENST00000521253 MRPL16Q9NX20 251 aaKnown RBP14.45□□□□□ -0.1
TRIM35-203ENST00000521253 TRGV11A0A075B6L2 103 aa14.44□□□□□ -0.1
TRIM35-203ENST00000521253 TRAV26-1A0A087WT03 109 aa14.44□□□□□ -0.1
TRIM35-203ENST00000521253 FBLL1A6NHQ2 334 aaKnown RBP14.44□□□□□ -0.1
TRIM35-203ENST00000521253 PEX7O00628 323 aa14.44□□□□□ -0.1
TRIM35-203ENST00000521253 TPT1P13693 172 aaKnown RBP14.44□□□□□ -0.1
TRIM35-203ENST00000521253 ZNF80P51504 273 aaPredicted RBP14.44□□□□□ -0.1
TRIM35-203ENST00000521253 LGALSLQ3ZCW2 172 aaPredicted RBP14.44□□□□□ -0.1
TRIM35-203ENST00000521253 FRAS1Q86XX4 4008 aa14.44□□□□□ -0.1
TRIM35-203ENST00000521253 hCG_2014768A0A024R1R8 64 aa14.43□□□□□ -0.1
TRIM35-203ENST00000521253 TRAV34A0A0B4J273 112 aa14.43□□□□□ -0.1
TRIM35-203ENST00000521253 GCGP01275 180 aa14.43□□□□□ -0.1
TRIM35-203ENST00000521253 RNF212Q495C1 297 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 615.4 ms