RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, human

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD1-208	ENST00000520561	SRD5A3	Q9H8P0	318 aa		6.62	□□□□□ -1.35
CSMD1-208	ENST00000520561	TRAV21	A0A0B4J279	112 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	C7orf71	A4D174	169 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	RBMY1B	A6NDE4	496 aa	Known RBP	6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	RBMY1E	A6NEQ0	496 aa	Known RBP	6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561		M0R2Z0	102 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	PPP1R2P9	O14990	202 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	SH2D1A	O60880	128 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561		P01737	135 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	MT-ND4L	P03901	98 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	PFN1	P07737	140 aa	Known RBP	6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	RBMY1D	P0C7P1	496 aa	Known RBP	6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	ERVFC1-1	P60608	527 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	SPINK13	Q1W4C9	94 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	IBA57	Q5T440	356 aa	Known RBP	6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	MORN3	Q6PF18	240 aa	Predicted RBP	6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	AMTN	Q6UX39	209 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	SFRP2	Q96HF1	295 aa		6.61	□□□□□ -1.35
CSMD1-208	ENST00000520561	C7orf77	A4D0Y5	90 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	FABP5P3	A8MUU1	101 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	ZNF705G	A8MUZ8	300 aa	Predicted RBP	6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	KLLN	B2CW77	178 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561		H7BYZ3	331 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	GATC	O43716	136 aa	Known RBP	6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	INS	P01308	110 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	RPL35A	P18077	110 aa	Known RBP	6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	FXYD7	P58549	80 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	KRTAP10-11	P60412	298 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	BTN1A1	Q13410	526 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	RNF212	Q495C1	297 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	PRR9	Q5T870	116 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	GFI1B	Q5VTD9	330 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	FAM231D	Q6ZW35	169 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	OR10G8	Q8NGN5	311 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	ANAPC16	Q96DE5	110 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	RNASE7	Q9H1E1	156 aa	Known RBP	6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	TUBA4B	Q9H853	241 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	RPS10P5	Q9NQ39	176 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	OSTC	Q9NRP0	149 aa		6.6	□□□□□ -1.35
CSMD1-208	ENST00000520561	TRAV12-2	A0A075B6T6	113 aa		6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561	C19orf71	A6NCJ1	209 aa		6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561	RNASE4	P34096	147 aa	Known RBP	6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561	ZNF80	P51504	273 aa	Predicted RBP	6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561		Q6AWC8	147 aa		6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561		Q8N1Y9	231 aa		6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561	NUDT10	Q8NFP7	164 aa		6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561	NUDT11	Q96G61	164 aa		6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561	C1QTNF4	Q9BXJ3	329 aa		6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561	CTDSP1	Q9GZU7	261 aa		6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561	RPP21	Q9H633	154 aa	Known RBP	6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561	NAGK	Q9UJ70	344 aa		6.59	□□□□□ -1.35
CSMD1-208	ENST00000520561		A0A087WWC5	75 aa		6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	TRAV12-3	A0A0B4J271	114 aa		6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	XKRY2	A2RUG3	117 aa		6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	CA1	P00915	261 aa	Predicted RBP	6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	APOC4	P55056	127 aa		6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	RPS20	P60866	119 aa	Known RBP	6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	CT83	Q5H943	113 aa		6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	LINC00322	Q6ZN03	302 aa	Predicted RBP	6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	OR2D3	Q8NGH3	330 aa		6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	C20orf144	Q9BQM9	153 aa		6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	XCL2	Q9UBD3	114 aa		6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	ANK2	Q01484	3957 aa		6.58	□□□□□ -1.36
CSMD1-208	ENST00000520561	KIR2DL5B	A0A0G2JN68	375 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	KIR2DL5B	A0A0G2JPC4	375 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	TMEM189	A5PLL7	270 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	ORM1	P02763	201 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	IGHV4-30-4	P0DP06	118 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	CRIP1	P50238	77 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	KIR3DS1	Q14943	382 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	LINC01559	Q495D7	138 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	KIR2DL5A	Q8N109	375 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	KIR2DL5B	Q8NHK3	375 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	TMEM208	Q9BTX3	173 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	CSTL1	Q9H114	145 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	TMEM242	Q9NWH2	141 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561		V9GYV3	84 aa		6.57	□□□□□ -1.36
CSMD1-208	ENST00000520561	NOTCH3	Q9UM47	2321 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	SORL1	Q92673	2214 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	TMSB15B	A0A087X1C1	80 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561		A8MWL6	223 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	CRX	O43186	299 aa	Predicted RBP	6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	S100P	P25815	95 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	RPL19	P84098	196 aa	Known RBP	6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	MUC21	Q5SSG8	566 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	KPRP	Q5T749	579 aa	Predicted RBP	6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	KCNIP4	Q6PIL6	250 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	ATRAID	Q6UW56	229 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	FAM159A	Q6UWV7	190 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	TMEM256	Q8N2U0	113 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	KCNS1	Q96KK3	526 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	GOLT1B	Q9Y3E0	138 aa		6.56	□□□□□ -1.36
CSMD1-208	ENST00000520561	IGHV1OR15-1	A0A075B7D0	117 aa		6.55	□□□□□ -1.36
CSMD1-208	ENST00000520561	ZNF324	O75467	553 aa	Predicted RBP	6.55	□□□□□ -1.36
CSMD1-208	ENST00000520561	CXCL1	P09341	107 aa		6.55	□□□□□ -1.36
CSMD1-208	ENST00000520561	ASIP	P42127	132 aa		6.55	□□□□□ -1.36
CSMD1-208	ENST00000520561	ANXA2R	Q3ZCQ2	193 aa		6.55	□□□□□ -1.36
CSMD1-208	ENST00000520561	TSKU	Q8WUA8	353 aa		6.55	□□□□□ -1.36
CSMD1-208	ENST00000520561	LINC01587	Q99440	93 aa		6.55	□□□□□ -1.36

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