RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 DLX4Q92988 240 aaPredicted RBP4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 BORCS7Q96B45 105 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 CCDC140Q96MF4 163 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 GGTLC1Q9BX51 225 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 TRAV2A0A0B4J234 112 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 SMIM27A0A1W2PRY6 76 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 IZUMO1RA6ND01 250 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 C2orf70A6NJV1 201 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 CGB1A6NKQ9 187 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 SLC17A3O00476 420 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 IGHV3-23P01764 117 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 GP9P14770 177 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 ID1P41134 155 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 HINT1P49773 126 aaPredicted RBP4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 EGFEM1PQ0D2K5 195 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 GCSAMLQ5JQS6 135 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 OR8I2Q8N0Y5 310 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 OR1L4Q8NGR5 311 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 MRAPQ8TCY5 172 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 DUX3Q96PT4 197 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 TRGV9Q99603 122 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 MGST2Q99735 147 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 ST20Q9HBF5 79 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 TMEM167BQ9NRX6 74 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 CLEC5AQ9NY25 188 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 NAT8BQ9UHF3 227 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 CHTOPQ9Y3Y2 248 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 LSM4Q9Y4Z0 139 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 YTHDF2Q9Y5A9 579 aaKnown RBP4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 SMAD5-AS1Q9Y6J3 95 aa4.31□□□□□ -1.72
CTNNA1-220ENST00000520260 IGHV7-4-1A0A0J9YVY3 117 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 E7EUB6 86 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 TAX1BP3O14907 124 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 IGLV1-51P01701 117 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 APCSP02743 223 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 IL4P05112 153 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 CTSGP08311 255 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 NHLRC4P0CG21 123 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 PMCHP20382 165 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 SRIP30626 198 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 GNG4P50150 75 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 UBE2G1P62253 170 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 BEAN1Q3B7T3 259 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 TIGITQ495A1 244 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 OCIAD2Q56VL3 154 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 CENPWQ5EE01 88 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 FAM231DQ6ZW35 169 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 TCF24Q7RTU0 167 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 NUDT10Q8NFP7 164 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 STXBP6Q8NFX7 210 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 C18orf32Q8TCD1 76 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 NPIPB3Q92617 1050 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 RNF125Q96EQ8 232 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 SMIM12Q96EX1 92 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 RCHY1Q96PM5 261 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 FAM110AQ9BQ89 295 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 CHRDL1Q9BU40 450 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 ZMAT4Q9H898 229 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 SEPSECSQ9HD40 501 aaKnown RBP4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 TENM1Q9UKZ4 2725 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 CUBNO60494 3623 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 MGAM2Q2M2H8 2515 aa4.3□□□□□ -1.72
CTNNA1-220ENST00000520260 ANK2Q01484 3957 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 IGHV3-21A0A0B4J1V1 117 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 A0A1W2PRE2 83 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 OR11H12B2RN74 326 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 G3V4G9 280 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 CRXO43186 299 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 COX7A2P2O60397 106 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 IGLV2-8P01709 118 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 FRMD6-AS1P0C7T7 363 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 IGLC1P0CG04 106 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 RPL7P18124 248 aaKnown RBP4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 APOC4P55056 127 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 LYZP61626 148 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 VAMP3Q15836 100 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 DEFB121Q5J5C9 76 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 SPATA31B1PQ5VZV4 182 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 MIC13Q5XKP0 118 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 C18orf65Q6ZTR6 163 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 DEFB125Q8N687 156 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 THAP8Q8NA92 274 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 OR1B1Q8NGR6 318 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 IGF2BP2-AS1Q96M15 143 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 PMCHL2Q9BQD1 86 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 RHPN1-AS1Q9BWJ2 59 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 CSTL1Q9H114 145 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 CST9LQ9H4G1 147 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 ZNF331Q9NQX6 463 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 SMPXQ9UHP9 88 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 HIGD1AQ9Y241 93 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 TNCP24821 2201 aa4.29□□□□□ -1.72
CTNNA1-220ENST00000520260 TRAV34A0A0B4J273 112 aa4.28□□□□□ -1.72
CTNNA1-220ENST00000520260 TMEM213A2RRL7 107 aa4.28□□□□□ -1.72
CTNNA1-220ENST00000520260 ZNF785A8K8V0 405 aa4.28□□□□□ -1.72
CTNNA1-220ENST00000520260 K7ERU9 68 aa4.28□□□□□ -1.72
CTNNA1-220ENST00000520260 CIDEAO60543 219 aa4.28□□□□□ -1.72
CTNNA1-220ENST00000520260 HSBP1O75506 76 aa4.28□□□□□ -1.72
CTNNA1-220ENST00000520260 TRBV12-3P01733 135 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms