RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 CTLA4P16410 223 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 GNG10P50151 68 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 DEFB131AP59861 70 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 CASP8Q14790 479 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 LCE3EQ5T5B0 92 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 HIST2H3PS2Q5TEC6 136 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 SFXN4Q6P4A7 337 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 C5orf46Q6UWT4 87 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 ZNF705AQ6ZN79 300 aaPredicted RBP1.73□□□□□ -2.13
CPNE3-204ENST00000517862 NEGR1Q7Z3B1 354 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 TMED4Q7Z7H5 227 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 SLC51BQ86UW2 128 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 NATD1Q8N6N6 113 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 PACRGLQ8N7B6 248 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 FER1L6-AS1Q8NA97 138 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 OR2T4Q8NH00 348 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 RASSF5Q8WWW0 418 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 ASB17Q8WXJ9 295 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 LEAP2Q969E1 77 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 SEC22CQ9BRL7 303 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 LINC00467Q9BRT7 94 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 TMEM109Q9BVC6 243 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 PECRQ9BY49 303 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 DPY30Q9C005 99 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 OR2D2Q9H210 308 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 INIPQ9NRY2 104 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 RASL12Q9NYN1 266 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 VPS29Q9UBQ0 182 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 SLC22A13Q9Y226 551 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 PHLDA3Q9Y5J5 127 aa1.73□□□□□ -2.13
CPNE3-204ENST00000517862 TRGV10A0A0A0MS01 117 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 GMNCA6NCL1 334 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 H3BMM0 161 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 M0R381 172 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 BET1O15155 118 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 OR5F1O95221 314 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 IGLV7-43P04211 117 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 PTHLHP12272 177 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 S100A5P33763 92 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 OR1E2P47887 323 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 DAPP51397 102 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 NAA20P61599 178 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 RANP62826 216 aaKnown RBP1.72□□□□□ -2.13
CPNE3-204ENST00000517862 HLA-DRB3P79483 266 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 FABP5Q01469 135 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 PRDX4Q13162 271 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 EIF4EBP1Q13541 118 aaPredicted RBP1.72□□□□□ -2.13
CPNE3-204ENST00000517862 KISS1Q15726 138 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 HIST2H3AQ71DI3 136 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 OR5J2Q8NH18 312 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 Q8WTZ3 238 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 UBE2WQ96B02 151 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 ABHD14BQ96IU4 210 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 RTL8AQ9BWD3 113 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 EIF5A2Q9GZV4 153 aaKnown RBP1.72□□□□□ -2.13
CPNE3-204ENST00000517862 MED28Q9H204 178 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.72□□□□□ -2.13
CPNE3-204ENST00000517862 COA4Q9NYJ1 87 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 WASHC3Q9Y3C0 194 aa1.72□□□□□ -2.13
CPNE3-204ENST00000517862 A0A096LPF7 62 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 TRAV8-1A0A0A6YYK1 113 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 EXOC1LA0A1B0GW35 172 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 RER1O15258 196 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 ZNF737O75373 536 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 GYPCP04921 128 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 HSD11B1P28845 292 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 CRABP2P29373 138 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 UBE2D1P51668 147 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 MRPS25P82663 173 aaKnown RBP1.71□□□□□ -2.14
CPNE3-204ENST00000517862 OR2F1Q13607 317 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 PLGLAQ15195 96 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 C1orf194Q5T5A4 169 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 OR51H1Q8NH63 302 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 GRPEL2Q8TAA5 225 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 DIRAS2Q96HU8 199 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 SPIN2AQ99865 258 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 SPIN2BQ9BPZ2 258 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 TAS2R1Q9NYW7 299 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 ATPIF1Q9UII2 106 aa1.71□□□□□ -2.14
CPNE3-204ENST00000517862 LSM5Q9Y4Y9 91 aaKnown RBP1.71□□□□□ -2.14
CPNE3-204ENST00000517862 IGKV1D-42A0A075B6H8 117 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 IGLV4-60A0A075B6I1 120 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 A6NN06 94 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 KNCNA6PVL3 124 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 H3BNG1 76 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 CCL1P22362 96 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 OR10J1P30954 320 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 OMPP47874 163 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 SPCS3P61009 180 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 RHOGP84095 191 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 GRK1Q15835 563 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 GLYATL3Q5SZD4 288 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 TMEM136Q6ZRR5 245 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 WFDC10BQ8IUB3 73 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 BAP18Q8IXM2 172 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 LINC00471Q8N535 108 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 RNF182Q8N6D2 247 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 UBL4BQ8N7F7 174 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 OR4C16Q8NGL9 310 aa1.7□□□□□ -2.14
CPNE3-204ENST00000517862 LINC00477Q96M19 166 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms