RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 HMGA1P17096 107 aaKnown RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 RHEBQ15382 184 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 SLC25A26Q70HW3 274 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 TRAPPC6BQ86SZ2 158 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 KCNRGQ8N5I3 272 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 FAM24BQ8N5W8 94 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 ZDHHC22Q8N966 263 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 OR2M3Q8NG83 312 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 CCL4L1Q8NHW4 92 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 CT55Q8WUE5 264 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 LRRC29Q8WV35 223 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 RDH12Q96NR8 316 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 SMR3AQ99954 134 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 TVP23BQ9NYZ1 205 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 FUT9Q9Y231 359 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 PKIGQ9Y2B9 76 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 COQ4Q9Y3A0 265 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 ZGRF1Q86YA3 2104 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 IGHV5-51A0A0C4DH38 117 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 IGKV1-9A0A0C4DH69 117 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 IGHV5-10-1A0A0J9YXX1 117 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 PGPA6NDG6 321 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 K7EP34 96 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 MMP7P09237 267 aaPredicted RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 CRYBB3P26998 211 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 MAP1AP78559 2803 aaPredicted RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 HLA-DRB3P79483 266 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 REG3AQ06141 175 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 ZNF404Q494X3 552 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 SBSNQ6UWP8 590 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 ZNF493Q6ZR52 646 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 WDR86Q86TI4 376 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 TEN1Q86WV5 123 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 YIPF7Q8N8F6 280 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 SLC25A40Q8TBP6 338 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 MAL2Q969L2 176 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 LSM10Q969L4 123 aaKnown RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 SLC25A44Q96H78 314 aaPredicted RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 NAA38Q9BRA0 125 aaKnown RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 GABARAPL3Q9BY60 117 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 CISHQ9NSE2 258 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 WASHC3Q9Y3C0 194 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 BAZ2BQ9UIF8 2168 aaKnown RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 ABCA7Q8IZY2 2146 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 IGLV3-9A0A075B6K5 115 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 TRBV6-6A0A0A6YYG2 114 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 IGHV6-1A0A0B4J1U7 121 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 TRAV8-6A0A0B4J262 113 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 FAM236AA0A1B0GUQ0 79 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 FAM236BA0A1B0GV22 79 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 IBA57-AS1B1ANH7 110 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 PDCD5O14737 125 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 ZNF324O75467 553 aaPredicted RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 HLA-DRB1P01911 266 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 UCHL1P09936 223 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 CECR9P0C854 216 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 RNASE4P34096 147 aaKnown RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 ZNF93P35789 620 aaPredicted RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 POLR2IP36954 125 aaKnown RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 NCBP2P52298 156 aaKnown RBP eCLIP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 ARPP19P56211 112 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 TMEM258P61165 79 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 CATR1Q13166 79 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 RASL11AQ6T310 242 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 SHISA6Q6ZSJ9 500 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 LINC00173Q6ZV60 143 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 TMEM61Q8N0U2 210 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 SVBPQ8N300 66 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 TSLPQ969D9 159 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 FAM3DQ96BQ1 224 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 ERMAPQ96PL5 475 aaPredicted RBP0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 IMMP2LQ96T52 175 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 GPER1Q99527 375 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 SHANK2-AS3Q9BTD1 123 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 LINC00846Q9NV44 126 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 C21orf62Q9NYP8 219 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 DEC1Q9P2X7 70 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 DNAH10Q8IVF4 4471 aa0.97□□□□□ -2.25
AC025539.1-201ENST00000515343 DNAH17Q9UFH2 4485 aa0.96□□□□□ -2.25
AC025539.1-201ENST00000515343 DNAH2Q9P225 4427 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 PLECQ15149 4684 aaKnown RBP0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 IGLV4-69A0A075B6H9 119 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 C9JQL5 133 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 NDUFC2-KCTD14E9PQ53 114 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 LST1O00453 97 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 RER1O15258 196 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 OR2T1O43869 369 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 PTHP01270 115 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 IGKV1-5P01602 117 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 TLX1NBP0CAT3 122 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 IGLC2P0DOY2 106 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 IGLC3P0DOY3 106 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 MYL9P24844 172 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 ZNF80P51504 273 aaPredicted RBP0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 DAD1P61803 113 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 PPP1CAP62136 330 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 HERVK_113P63121 156 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 HBG1P69891 147 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 HBG2P69892 147 aa0.96□□□□□ -2.26
AC025539.1-201ENST00000515343 EIF4EBP1Q13541 118 aaPredicted RBP0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms