RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 LINC00474Q9P2X8 69 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 HIGD1AQ9Y241 93 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 POMPQ9Y244 141 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 TRGV11A0A075B6L2 103 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 A0A096LNI7 61 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 LOC100130705A0A1B0GUX0 176 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 MEIS3P1A6NDR6 274 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 SLC17A3O00476 420 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 RGS10O43665 173 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 CIDEAO60543 219 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 ANGP03950 147 aaKnown RBP4.44□□□□□ -1.7
CLDND1-229ENST00000513988 HOXB5P09067 269 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 CRISP2P16562 243 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 PTTG1IPP53801 180 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 AARDQ4LEZ3 155 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 PRR9Q5T870 116 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 OR1S1Q8NH92 325 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 FAM19A4Q96LR4 140 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 FAM107BQ9H098 131 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 PXMP4Q9Y6I8 212 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 U3KQ87 197 aa4.44□□□□□ -1.7
CLDND1-229ENST00000513988 TMEM262E9PQX1 116 aa4.43□□□□□ -1.7
CLDND1-229ENST00000513988 H3BTX0 84 aa4.43□□□□□ -1.7
CLDND1-229ENST00000513988 PDCD5O14737 125 aa4.43□□□□□ -1.7
CLDND1-229ENST00000513988 PMP2P02689 132 aa4.43□□□□□ -1.7
CLDND1-229ENST00000513988 NMBP08949 121 aa4.43□□□□□ -1.7
CLDND1-229ENST00000513988 OR5G3P0C626 314 aa4.43□□□□□ -1.7
CLDND1-229ENST00000513988 LINC00694P0DN24 101 aa4.43□□□□□ -1.7
CLDND1-229ENST00000513988 MGST1P10620 155 aaKnown RBP4.43□□□□□ -1.7
CLDND1-229ENST00000513988 UBE2MP61081 183 aaKnown RBP4.43□□□□□ -1.7
CLDND1-229ENST00000513988 TMEM182Q6ZP80 229 aaPredicted RBP4.43□□□□□ -1.7
CLDND1-229ENST00000513988 S100A7AQ86SG5 101 aa4.43□□□□□ -1.7
CLDND1-229ENST00000513988 NANOGP1Q8N7R0 232 aa4.43□□□□□ -1.7
CLDND1-229ENST00000513988 Q9UF83 564 aa4.43□□□□□ -1.7
CLDND1-229ENST00000513988 KRTAP4-16G5E9R7 235 aaPredicted RBP4.42□□□□□ -1.7
CLDND1-229ENST00000513988 MRPS12O15235 138 aaKnown RBP4.42□□□□□ -1.7
CLDND1-229ENST00000513988 HYPMO75409 117 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 IGLV7-43P04211 117 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 RPS10P46783 165 aaKnown RBP4.42□□□□□ -1.7
CLDND1-229ENST00000513988 INPP1P49441 399 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 SRPXP78539 464 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 KRTAP26-1Q6PEX3 210 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 ACOT7LQ6ZUV0 252 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 LINC00337Q8N6G1 96 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 ZFAND2AQ8N6M9 145 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 TP53RKQ96S44 253 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 SAMD10Q9BYL1 202 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 PPDPFQ9H3Y8 114 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 IFT46Q9NQC8 304 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 RNF24Q9Y225 148 aa4.42□□□□□ -1.7
CLDND1-229ENST00000513988 CARHSP1Q9Y2V2 147 aaKnown RBP4.42□□□□□ -1.7
CLDND1-229ENST00000513988 TRAV18A0A075B6X5 111 aa4.41□□□□□ -1.7
CLDND1-229ENST00000513988 CALB2P22676 271 aa4.41□□□□□ -1.7
CLDND1-229ENST00000513988 CYCSP99999 105 aaKnown RBP4.41□□□□□ -1.7
CLDND1-229ENST00000513988 CFAP126Q5VTH2 177 aa4.41□□□□□ -1.7
CLDND1-229ENST00000513988 UFD1Q92890 307 aa4.41□□□□□ -1.7
CLDND1-229ENST00000513988 MRPL53Q96EL3 112 aaKnown RBP4.41□□□□□ -1.7
CLDND1-229ENST00000513988 NAA50Q9GZZ1 169 aaKnown RBP4.41□□□□□ -1.7
CLDND1-229ENST00000513988 AGPAT4-IT1Q9H0P7 198 aa4.41□□□□□ -1.7
CLDND1-229ENST00000513988 PGAM2P15259 253 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 TAS2R46P59540 309 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 TRAM1Q15629 374 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 ZNF876PQ49A33 203 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 CLPSL2Q6UWE3 100 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 FAM159AQ6UWV7 190 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 LINC00173Q6ZV60 143 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 ZNF546Q86UE3 836 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 YIPF6Q96EC8 236 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 GFRA4Q9GZZ7 299 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 PLCXD1Q9NUJ7 323 aa4.4□□□□□ -1.71
CLDND1-229ENST00000513988 A0A087WWL8 130 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 C3orf85A0A1B0GTC6 90 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 IL5P05113 134 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 FGF8P55075 233 aaPredicted RBP4.39□□□□□ -1.71
CLDND1-229ENST00000513988 ATP5IP56385 69 aaPredicted RBP4.39□□□□□ -1.71
CLDND1-229ENST00000513988 EIF5AP63241 154 aaKnown RBP4.39□□□□□ -1.71
CLDND1-229ENST00000513988 SP6Q3SY56 376 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 MPV17L2Q567V2 206 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 TMEM78Q5T7P6 136 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 AHSA2Q719I0 299 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 BPIFA4PQ86YQ2 179 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 DTD1Q8TEA8 209 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 CYGBQ8WWM9 190 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 MGLLQ99685 303 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 ATP5SQ99766 215 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 MND1Q9BWT6 205 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 SLC39A9Q9NUM3 307 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 CACFD1Q9UGQ2 172 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 PKIGQ9Y2B9 76 aa4.39□□□□□ -1.71
CLDND1-229ENST00000513988 LINC00869P0C866 280 aa4.38□□□□□ -1.71
CLDND1-229ENST00000513988 RAB3BP20337 219 aa4.38□□□□□ -1.71
CLDND1-229ENST00000513988 RND3P61587 244 aa4.38□□□□□ -1.71
CLDND1-229ENST00000513988 FABP5Q01469 135 aa4.38□□□□□ -1.71
CLDND1-229ENST00000513988 AKR1C1Q04828 323 aa4.38□□□□□ -1.71
CLDND1-229ENST00000513988 SPHARQ15513 63 aa4.38□□□□□ -1.71
CLDND1-229ENST00000513988 PRR27Q6MZM9 219 aa4.38□□□□□ -1.71
CLDND1-229ENST00000513988 RHBDL2Q9NX52 303 aa4.38□□□□□ -1.71
CLDND1-229ENST00000513988 HSPB7Q9UBY9 170 aa4.38□□□□□ -1.71
CLDND1-229ENST00000513988 NAGKQ9UJ70 344 aa4.38□□□□□ -1.71
CLDND1-229ENST00000513988 PAIP2BQ9ULR5 123 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms