RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 RCVRNP35243 200 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 RANBP1P43487 201 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 NDUFV3P56181 108 aaKnown RBP3.04□□□□□ -1.92
HTT-211ENST00000513326 TCL1AP56279 114 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 TSPAN5P62079 268 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 MUC21Q5SSG8 566 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 Q6ZRU5 148 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 LHFPL1Q86WI0 220 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 SELENOHQ8IZQ5 122 aaKnown RBP3.04□□□□□ -1.92
HTT-211ENST00000513326 LGI3Q8N145 548 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 C10orf126Q8N4M7 172 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 OR13C8Q8NGS7 320 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 GPX8Q8TED1 209 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 SLC35E1Q96K37 410 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 VGLL1Q99990 258 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 CHCHD5Q9BSY4 110 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 SHANK2-AS3Q9BTD1 123 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 OCR1Q9BZK8 76 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 RBKSQ9H477 322 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 DIABLOQ9NR28 239 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.04□□□□□ -1.92
HTT-211ENST00000513326 SCN3BQ9NY72 215 aa3.04□□□□□ -1.92
HTT-211ENST00000513326 A0A0A6YYH2 397 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 TRAV5A0A0B4J249 113 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 IGHV3-16A0A0C4DH30 117 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 A6NJ64 397 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 K7EP13 123 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 CDS2O95674 445 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 IAPPP10997 89 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 S100GP29377 79 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 AQP4P55087 323 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 ERCC8Q13216 396 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 ZNF846Q147U1 533 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 LINC00518Q8N0U6 118 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 OR4D5Q8NGN0 318 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 GLYATL2Q8WU03 294 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 LINC00477Q96M19 166 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 C20orf144Q9BQM9 153 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 PYGO2Q9BRQ0 406 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 TMEM147Q9BVK8 224 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 MRPL32Q9BYC8 188 aaKnown RBP3.03□□□□□ -1.92
HTT-211ENST00000513326 TMEM222Q9H0R3 208 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 JPT2Q9H910 190 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 RPH3ALQ9UNE2 315 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 TPRKBQ9Y3C4 175 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 TMEM56-RWDD3S4R434 201 aa3.03□□□□□ -1.92
HTT-211ENST00000513326 TRGV4A0A0C4DH28 118 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 C7orf71A4D174 169 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 RNF222A6NCQ9 220 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 KRTAP16-1A8MUX0 517 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 GABARAPH6UMI1 98 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 GABARAPO95166 117 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 PRSS3P35030 304 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 GPX4P36969 197 aaPredicted RBP3.02□□□□□ -1.93
HTT-211ENST00000513326 PPT1P50897 306 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 KRTAP10-8P60410 259 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 ACOT6Q3I5F7 207 aaPredicted RBP3.02□□□□□ -1.93
HTT-211ENST00000513326 UBE2NLQ5JXB2 153 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 STEAP1BQ6NZ63 245 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 LPCAT3Q6P1A2 487 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 PATE2Q6UY27 113 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 DAZ4Q86SG3 579 aaKnown RBP3.02□□□□□ -1.93
HTT-211ENST00000513326 SNX29P2Q8IUI4 249 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 SAMD12Q8N8I0 201 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 ZNF680Q8NEM1 530 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 OR10P1Q8NGE3 313 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 MARCH1Q8TCQ1 289 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 DTD1Q8TEA8 209 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 TMEM37Q8WXS4 190 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 RBPMSQ93062 196 aaKnown RBP3.02□□□□□ -1.93
HTT-211ENST00000513326 LINC01600Q96MT4 127 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 PAXXQ9BUH6 204 aa3.02□□□□□ -1.93
HTT-211ENST00000513326 ZNF331Q9NQX6 463 aaPredicted RBP3.02□□□□□ -1.93
HTT-211ENST00000513326 DAZ3Q9NR90 486 aaKnown RBP3.02□□□□□ -1.93
HTT-211ENST00000513326 LOC100506127A0A0U1RQW1 187 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 A0A0U1RRA0 63 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 KLLNB2CW77 178 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 H3BQ15 152 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 M0R3E3 92 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 ATG12O94817 140 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 CD3DP04234 171 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 FABP1P07148 127 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 RPL7P18124 248 aaKnown RBP3.01□□□□□ -1.93
HTT-211ENST00000513326 RNASE4P34096 147 aaKnown RBP3.01□□□□□ -1.93
HTT-211ENST00000513326 LEPP41159 167 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 ASAH1Q13510 395 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 OR10J3Q5JRS4 329 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 FAM159AQ6UWV7 190 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 ACOT7LQ6ZUV0 252 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 Q8N377 158 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 EIF4E3Q8N5X7 224 aaKnown RBP3.01□□□□□ -1.93
HTT-211ENST00000513326 LRRC20Q8TCA0 184 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 FAM19A4Q96LR4 140 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 GPR82Q96P67 336 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 RTBDNQ9BSG5 229 aaPredicted RBP3.01□□□□□ -1.93
HTT-211ENST00000513326 SLC25A31Q9H0C2 315 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 NAA60Q9H7X0 242 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 C8orf4Q9NR00 106 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 COPZ2Q9P299 210 aa3.01□□□□□ -1.93
HTT-211ENST00000513326 CRCT1Q9UGL9 99 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms