RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 RGS13O14921 159 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 GAGE7O76087 117 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 P0DMU3 169 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 FAM231AP0DMU4 169 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 FAM231CP0DMU5 169 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 ZNF345Q14585 488 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 AKR1C8PQ5T2L2 129 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 ARPC5LQ9BPX5 153 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 TP53TG3Q9ULZ0 132 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 VPS13DQ5THJ4 4388 aa12.48□□□□□ -0.41
DDR1-272ENST00000513243 CTXND1A0A1B0GTU2 59 aa12.47□□□□□ -0.41
DDR1-272ENST00000513243 Q6ZTI0 123 aa12.47□□□□□ -0.41
DDR1-272ENST00000513243 POM121L12Q8N7R1 296 aa12.47□□□□□ -0.41
DDR1-272ENST00000513243 C5orf17Q8NAS9 161 aa12.47□□□□□ -0.41
DDR1-272ENST00000513243 TVP23CQ96ET8 276 aa12.47□□□□□ -0.41
DDR1-272ENST00000513243 KLF12Q9Y4X4 402 aa12.47□□□□□ -0.41
DDR1-272ENST00000513243 GGTLC3B5MD39 225 aa12.46□□□□□ -0.41
DDR1-272ENST00000513243 TCRAP04437 139 aa12.46□□□□□ -0.41
DDR1-272ENST00000513243 TCL1AP56279 114 aa12.46□□□□□ -0.41
DDR1-272ENST00000513243 SUMO1P63165 101 aaKnown RBP12.46□□□□□ -0.41
DDR1-272ENST00000513243 MUC21Q5SSG8 566 aa12.46□□□□□ -0.41
DDR1-272ENST00000513243 Q6AWC8 147 aa12.46□□□□□ -0.41
DDR1-272ENST00000513243 IQCF2Q8IXL9 164 aa12.46□□□□□ -0.41
DDR1-272ENST00000513243 SGK494Q96LW2 274 aa12.46□□□□□ -0.41
DDR1-272ENST00000513243 IBA57Q5T440 356 aaKnown RBP12.45□□□□□ -0.42
DDR1-272ENST00000513243 C15orf53Q8NAA6 179 aa12.45□□□□□ -0.42
DDR1-272ENST00000513243 TMPRSS5Q9H3S3 457 aa12.45□□□□□ -0.42
DDR1-272ENST00000513243 A0A0D9SG52 128 aa12.44□□□□□ -0.42
DDR1-272ENST00000513243 SERTM2A0A1B0GWG4 89 aa12.44□□□□□ -0.42
DDR1-272ENST00000513243 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
DDR1-272ENST00000513243 FGF8P55075 233 aaPredicted RBP12.44□□□□□ -0.42
DDR1-272ENST00000513243 TREM1Q9NP99 234 aa12.44□□□□□ -0.42
DDR1-272ENST00000513243 EPDR1Q9UM22 224 aa12.44□□□□□ -0.42
DDR1-272ENST00000513243 TRGV1A0A0A0MS02 117 aa12.43□□□□□ -0.42
DDR1-272ENST00000513243 F6UZH7 168 aa12.43□□□□□ -0.42
DDR1-272ENST00000513243 SPINK4O60575 86 aa12.43□□□□□ -0.42
DDR1-272ENST00000513243 HOXA5P20719 270 aa12.43□□□□□ -0.42
DDR1-272ENST00000513243 OR5I1Q13606 314 aa12.43□□□□□ -0.42
DDR1-272ENST00000513243 BCL2L11O43521 198 aa12.42□□□□□ -0.42
DDR1-272ENST00000513243 IGLV2-11P01706 119 aa12.42□□□□□ -0.42
DDR1-272ENST00000513243 FHITP49789 147 aa12.42□□□□□ -0.42
DDR1-272ENST00000513243 C18orf15Q96N68 181 aa12.42□□□□□ -0.42
DDR1-272ENST00000513243 ZNF471Q9BX82 626 aaPredicted RBP12.42□□□□□ -0.42
DDR1-272ENST00000513243 MDFICQ9P1T7 246 aa12.42□□□□□ -0.42
DDR1-272ENST00000513243 KMT2AQ03164 3969 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 TRGV2A0A075B6R0 118 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 KANTRA0A1W2PQU2 76 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 MAP1LC3B2A6NCE7 125 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 K7EQM0 130 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 NUDT3O95989 172 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 SEC11BP0C7V7 166 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 UBE2G2P60604 165 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 ZNF415Q09FC8 603 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 Q6ZNX1 250 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 UBE2DNLQ8IWF7 75 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 CYB561D1Q8N8Q1 229 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 ATG101Q9BSB4 218 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 MAP1LC3BQ9GZQ8 125 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 NAGKQ9UJ70 344 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 PSG8Q9UQ74 426 aa12.41□□□□□ -0.42
DDR1-272ENST00000513243 TRAV26-1A0A087WT03 109 aa12.4□□□□□ -0.42
DDR1-272ENST00000513243 FLI1Q01543 452 aaPredicted RBP12.4□□□□□ -0.42
DDR1-272ENST00000513243 TMEM183BQ1AE95 376 aa12.4□□□□□ -0.42
DDR1-272ENST00000513243 LGALS9BQ3B8N2 356 aa12.4□□□□□ -0.42
DDR1-272ENST00000513243 TDRG1Q3Y452 100 aa12.4□□□□□ -0.42
DDR1-272ENST00000513243 RNF212Q495C1 297 aa12.4□□□□□ -0.42
DDR1-272ENST00000513243 TMUB2Q71RG4 321 aa12.4□□□□□ -0.42
DDR1-272ENST00000513243 TMEM183AQ8IXX5 376 aa12.4□□□□□ -0.42
DDR1-272ENST00000513243 C8orf49Q96NF6 230 aa12.4□□□□□ -0.42
DDR1-272ENST00000513243 NDFIP1Q9BT67 221 aa12.4□□□□□ -0.42
DDR1-272ENST00000513243 MRPL16Q9NX20 251 aaKnown RBP12.4□□□□□ -0.42
DDR1-272ENST00000513243 TRAV21A0A0B4J279 112 aa12.39□□□□□ -0.43
DDR1-272ENST00000513243 FAM74A7A6NL05 159 aa12.39□□□□□ -0.43
DDR1-272ENST00000513243 IFNA7P01567 189 aa12.39□□□□□ -0.43
DDR1-272ENST00000513243 PRNTQ86SH4 94 aa12.39□□□□□ -0.43
DDR1-272ENST00000513243 TMEM75Q8N9X5 138 aa12.39□□□□□ -0.43
DDR1-272ENST00000513243 LINC00479Q96M42 142 aa12.39□□□□□ -0.43
DDR1-272ENST00000513243 EPPK1P58107 5090 aaKnown RBP12.38□□□□□ -0.43
DDR1-272ENST00000513243 TRGV11A0A075B6L2 103 aa12.38□□□□□ -0.43
DDR1-272ENST00000513243 A0A0J9YY99 117 aa12.38□□□□□ -0.43
DDR1-272ENST00000513243 GNRH2O43555 120 aa12.38□□□□□ -0.43
DDR1-272ENST00000513243 ZNF80P51504 273 aaPredicted RBP12.38□□□□□ -0.43
DDR1-272ENST00000513243 TCTE3Q8IZS6 198 aa12.38□□□□□ -0.43
DDR1-272ENST00000513243 NKX6-2Q9C056 277 aaPredicted RBP12.38□□□□□ -0.43
DDR1-272ENST00000513243 TRAV34A0A0B4J273 112 aa12.37□□□□□ -0.43
DDR1-272ENST00000513243 FBLL1A6NHQ2 334 aaKnown RBP12.37□□□□□ -0.43
DDR1-272ENST00000513243 UMAD1C9J7I0 102 aa12.37□□□□□ -0.43
DDR1-272ENST00000513243 PFDN1O60925 122 aa12.37□□□□□ -0.43
DDR1-272ENST00000513243 STOML3Q8TAV4 291 aa12.37□□□□□ -0.43
DDR1-272ENST00000513243 FAM213BQ8TBF2 198 aa12.37□□□□□ -0.43
DDR1-272ENST00000513243 IGHV3-16A0A0C4DH30 117 aa12.36□□□□□ -0.43
DDR1-272ENST00000513243 M0R2N4 97 aa12.36□□□□□ -0.43
DDR1-272ENST00000513243 PEX7O00628 323 aa12.36□□□□□ -0.43
DDR1-272ENST00000513243 GCGP01275 180 aa12.36□□□□□ -0.43
DDR1-272ENST00000513243 EIF5AP63241 154 aaKnown RBP12.36□□□□□ -0.43
DDR1-272ENST00000513243 LGALSLQ3ZCW2 172 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms