RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 TMED6Q8WW62 240 aa11.27□□□□□ -0.61
DDX41-214ENST00000512334 LENEPQ9Y5L5 61 aa11.27□□□□□ -0.61
DDX41-214ENST00000512334 IGHV1OR15-1A0A075B7D0 117 aa11.26□□□□□ -0.61
DDX41-214ENST00000512334 K7EQM0 130 aa11.26□□□□□ -0.61
DDX41-214ENST00000512334 UBE2G2P60604 165 aa11.26□□□□□ -0.61
DDX41-214ENST00000512334 FAM210BQ96KR6 192 aa11.26□□□□□ -0.61
DDX41-214ENST00000512334 SGK494Q96LW2 274 aa11.26□□□□□ -0.61
DDX41-214ENST00000512334 LINC00467Q9BRT7 94 aa11.26□□□□□ -0.61
DDX41-214ENST00000512334 TMPRSS5Q9H3S3 457 aa11.26□□□□□ -0.61
DDX41-214ENST00000512334 GSN-AS1Q9NRJ2 163 aa11.26□□□□□ -0.61
DDX41-214ENST00000512334 hCG_2014768A0A024R1R8 64 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 SERTM2A0A1B0GWG4 89 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 GAGE12BA1L429 117 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 F5H768 121 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 GAGE7O76087 117 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 TCRAP04437 139 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 ATP5G1P05496 136 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 GAGE12FP0CL80 117 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 GAGE12GP0CL81 117 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 GAGE12IP0CL82 117 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 ATP5G3P48201 142 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 EIF5AP63241 154 aaKnown RBP11.25□□□□□ -0.61
DDX41-214ENST00000512334 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 MUC21Q5SSG8 566 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 TMEM88Q6PEY1 159 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 TMUB2Q71RG4 321 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
DDX41-214ENST00000512334 A0A1W2PRE2 83 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 F6UZH7 168 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 SEC11BP0C7V7 166 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 FHITP49789 147 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 TCTE3Q8IZS6 198 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 C11orf72Q8NBR9 251 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 STOML3Q8TAV4 291 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 NDFIP1Q9BT67 221 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 TREM1Q9NP99 234 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 NAGKQ9UJ70 344 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 EPDR1Q9UM22 224 aa11.24□□□□□ -0.61
DDX41-214ENST00000512334 IFNA7P01567 189 aa11.23□□□□□ -0.61
DDX41-214ENST00000512334 DAZ2Q13117 558 aaKnown RBP11.23□□□□□ -0.61
DDX41-214ENST00000512334 Q6AWC8 147 aa11.23□□□□□ -0.61
DDX41-214ENST00000512334 CYB561D1Q8N8Q1 229 aa11.23□□□□□ -0.61
DDX41-214ENST00000512334 FAM213BQ8TBF2 198 aa11.23□□□□□ -0.61
DDX41-214ENST00000512334 UMAD1C9J7I0 102 aa11.22□□□□□ -0.61
DDX41-214ENST00000512334 TPT1P13693 172 aaKnown RBP11.22□□□□□ -0.61
DDX41-214ENST00000512334 TCL1AP56279 114 aa11.22□□□□□ -0.61
DDX41-214ENST00000512334 FAM159AQ6UWV7 190 aa11.22□□□□□ -0.61
DDX41-214ENST00000512334 Q6ZTI0 123 aa11.22□□□□□ -0.61
DDX41-214ENST00000512334 LINC00612Q8N6U2 182 aa11.22□□□□□ -0.61
DDX41-214ENST00000512334 TVP23CQ96ET8 276 aa11.22□□□□□ -0.61
DDX41-214ENST00000512334 ATG101Q9BSB4 218 aa11.22□□□□□ -0.61
DDX41-214ENST00000512334 PSG8Q9UQ74 426 aa11.22□□□□□ -0.61
DDX41-214ENST00000512334 KLF12Q9Y4X4 402 aa11.22□□□□□ -0.61
DDX41-214ENST00000512334 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.61
DDX41-214ENST00000512334 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.61
DDX41-214ENST00000512334 P0DMU3 169 aa11.21□□□□□ -0.61
DDX41-214ENST00000512334 FAM231AP0DMU4 169 aa11.21□□□□□ -0.61
DDX41-214ENST00000512334 FAM231CP0DMU5 169 aa11.21□□□□□ -0.61
DDX41-214ENST00000512334 FLI1Q01543 452 aaPredicted RBP11.21□□□□□ -0.61
DDX41-214ENST00000512334 ZNF415Q09FC8 603 aa11.21□□□□□ -0.61
DDX41-214ENST00000512334 IBA57Q5T440 356 aaKnown RBP11.21□□□□□ -0.61
DDX41-214ENST00000512334 PRNTQ86SH4 94 aa11.21□□□□□ -0.61
DDX41-214ENST00000512334 TRGV2A0A075B6R0 118 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 A0A1B0GV50 99 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 FAM74A7A6NL05 159 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 C1QBP02746 253 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 OR5I1Q13606 314 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 TMEM183BQ1AE95 376 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 LGALSLQ3ZCW2 172 aaPredicted RBP11.2□□□□□ -0.62
DDX41-214ENST00000512334 AKAP14Q86UN6 197 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 UBE2DNLQ8IWF7 75 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 TMEM183AQ8IXX5 376 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 C15orf53Q8NAA6 179 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 SFT2D1Q8WV19 159 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 C8orf49Q96NF6 230 aa11.2□□□□□ -0.62
DDX41-214ENST00000512334 NKX6-2Q9C056 277 aaPredicted RBP11.2□□□□□ -0.62
DDX41-214ENST00000512334 TRGV11A0A075B6L2 103 aa11.19□□□□□ -0.62
DDX41-214ENST00000512334 PEX7O00628 323 aa11.19□□□□□ -0.62
DDX41-214ENST00000512334 NUDT3O95989 172 aa11.19□□□□□ -0.62
DDX41-214ENST00000512334 PPT1P50897 306 aa11.19□□□□□ -0.62
DDX41-214ENST00000512334 ZFP69Q49AA0 526 aa11.19□□□□□ -0.62
DDX41-214ENST00000512334 CST9LP1Q5W188 147 aa11.19□□□□□ -0.62
DDX41-214ENST00000512334 DPPA3Q6W0C5 159 aa11.19□□□□□ -0.62
DDX41-214ENST00000512334 TMEM75Q8N9X5 138 aa11.19□□□□□ -0.62
DDX41-214ENST00000512334 LINC00479Q96M42 142 aa11.19□□□□□ -0.62
DDX41-214ENST00000512334 VPS13DQ5THJ4 4388 aa11.19□□□□□ -0.62
DDX41-214ENST00000512334 TRAV34A0A0B4J273 112 aa11.18□□□□□ -0.62
DDX41-214ENST00000512334 FBLL1A6NHQ2 334 aaKnown RBP11.18□□□□□ -0.62
DDX41-214ENST00000512334 SPINK4O60575 86 aa11.18□□□□□ -0.62
DDX41-214ENST00000512334 IGLV2-11P01706 119 aa11.18□□□□□ -0.62
DDX41-214ENST00000512334 POM121L12Q8N7R1 296 aa11.18□□□□□ -0.62
DDX41-214ENST00000512334 MRPL16Q9NX20 251 aaKnown RBP11.18□□□□□ -0.62
DDX41-214ENST00000512334 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
DDX41-214ENST00000512334 GCGP01275 180 aa11.17□□□□□ -0.62
DDX41-214ENST00000512334 H2AFB1P0C5Y9 115 aa11.17□□□□□ -0.62
DDX41-214ENST00000512334 SMUG1Q53HV7 270 aa11.17□□□□□ -0.62
DDX41-214ENST00000512334 SAPCD1Q5SSQ6 148 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms