RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ZNF324O75467 553 aaPredicted RBP11.88□□□□□ -0.51
SNCA-209ENST00000506244 TCRAP04437 139 aa11.88□□□□□ -0.51
SNCA-209ENST00000506244 SUMO1P63165 101 aaKnown RBP11.88□□□□□ -0.51
SNCA-209ENST00000506244 GNG5P63218 68 aa11.88□□□□□ -0.51
SNCA-209ENST00000506244 ANXA2RQ3ZCQ2 193 aa11.88□□□□□ -0.51
SNCA-209ENST00000506244 CYB561D1Q8N8Q1 229 aa11.88□□□□□ -0.51
SNCA-209ENST00000506244 IGHV4-4A0A075B6R2 117 aa11.87□□□□□ -0.51
SNCA-209ENST00000506244 CBY3A6NI87 242 aa11.87□□□□□ -0.51
SNCA-209ENST00000506244 DEFB130BP0DP73 79 aa11.87□□□□□ -0.51
SNCA-209ENST00000506244 DEFB130AP0DP74 79 aa11.87□□□□□ -0.51
SNCA-209ENST00000506244 FGF8P55075 233 aaPredicted RBP11.87□□□□□ -0.51
SNCA-209ENST00000506244 PRR9Q5T870 116 aa11.87□□□□□ -0.51
SNCA-209ENST00000506244 Q6AWC8 147 aa11.87□□□□□ -0.51
SNCA-209ENST00000506244 FAM213BQ8TBF2 198 aa11.87□□□□□ -0.51
SNCA-209ENST00000506244 ATG101Q9BSB4 218 aa11.87□□□□□ -0.51
SNCA-209ENST00000506244 NOP10Q9NPE3 64 aaKnown RBP11.87□□□□□ -0.51
SNCA-209ENST00000506244 EPDR1Q9UM22 224 aa11.87□□□□□ -0.51
SNCA-209ENST00000506244 ARL2-SNX15V9GYD0 113 aa11.87□□□□□ -0.51
SNCA-209ENST00000506244 PLECQ15149 4684 aaKnown RBP11.87□□□□□ -0.51
SNCA-209ENST00000506244 IGHV1OR15-1A0A075B7D0 117 aa11.86□□□□□ -0.51
SNCA-209ENST00000506244 IFNA7P01567 189 aa11.86□□□□□ -0.51
SNCA-209ENST00000506244 HTN3P15516 51 aa11.86□□□□□ -0.51
SNCA-209ENST00000506244 PPT1P50897 306 aa11.86□□□□□ -0.51
SNCA-209ENST00000506244 TMEM75Q8N9X5 138 aa11.86□□□□□ -0.51
SNCA-209ENST00000506244 TCEAL7Q9BRU2 100 aa11.86□□□□□ -0.51
SNCA-209ENST00000506244 NDUFAF3Q9BU61 184 aa11.86□□□□□ -0.51
SNCA-209ENST00000506244 TREM1Q9NP99 234 aa11.86□□□□□ -0.51
SNCA-209ENST00000506244 TRAV8-1A0A0A6YYK1 113 aa11.85□□□□□ -0.51
SNCA-209ENST00000506244 LY6G6CO95867 125 aa11.85□□□□□ -0.51
SNCA-209ENST00000506244 UBE2G2P60604 165 aa11.85□□□□□ -0.51
SNCA-209ENST00000506244 DAZ2Q13117 558 aaKnown RBP11.85□□□□□ -0.51
SNCA-209ENST00000506244 ZFP69Q49AA0 526 aa11.85□□□□□ -0.51
SNCA-209ENST00000506244 IBA57Q5T440 356 aaKnown RBP11.85□□□□□ -0.51
SNCA-209ENST00000506244 TMPRSS5Q9H3S3 457 aa11.85□□□□□ -0.51
SNCA-209ENST00000506244 SACSQ9NZJ4 4579 aa11.85□□□□□ -0.51
SNCA-209ENST00000506244 TRAV21A0A0B4J279 112 aa11.84□□□□□ -0.51
SNCA-209ENST00000506244 FAM74A7A6NL05 159 aa11.84□□□□□ -0.51
SNCA-209ENST00000506244 ATP5G1P05496 136 aa11.84□□□□□ -0.51
SNCA-209ENST00000506244 ATP5G3P48201 142 aa11.84□□□□□ -0.51
SNCA-209ENST00000506244 FHITP49789 147 aa11.84□□□□□ -0.51
SNCA-209ENST00000506244 RAB5CP51148 216 aa11.84□□□□□ -0.51
SNCA-209ENST00000506244 LGALSLQ3ZCW2 172 aaPredicted RBP11.84□□□□□ -0.51
SNCA-209ENST00000506244 LGALS9CQ6DKI2 356 aa11.84□□□□□ -0.51
SNCA-209ENST00000506244 SFT2D1Q8WV19 159 aa11.84□□□□□ -0.51
SNCA-209ENST00000506244 HIST1H2BAQ96A08 127 aa11.84□□□□□ -0.51
SNCA-209ENST00000506244 APLNQ9ULZ1 77 aa11.84□□□□□ -0.51
SNCA-209ENST00000506244 F6UZH7 168 aa11.83□□□□□ -0.52
SNCA-209ENST00000506244 FLI1Q01543 452 aaPredicted RBP11.83□□□□□ -0.52
SNCA-209ENST00000506244 ZNF415Q09FC8 603 aa11.83□□□□□ -0.52
SNCA-209ENST00000506244 FAM159AQ6UWV7 190 aa11.83□□□□□ -0.52
SNCA-209ENST00000506244 SLC51BQ86UW2 128 aa11.83□□□□□ -0.52
SNCA-209ENST00000506244 MBD3L1Q8WWY6 194 aa11.83□□□□□ -0.52
SNCA-209ENST00000506244 PLA2G2EQ9NZK7 142 aa11.83□□□□□ -0.52
SNCA-209ENST00000506244 PSG8Q9UQ74 426 aa11.83□□□□□ -0.52
SNCA-209ENST00000506244 DNAH1Q9P2D7 4330 aa11.82□□□□□ -0.52
SNCA-209ENST00000506244 TRGV11A0A075B6L2 103 aa11.82□□□□□ -0.52
SNCA-209ENST00000506244 TEX46H3BTG2 121 aa11.82□□□□□ -0.52
SNCA-209ENST00000506244 PEX7O00628 323 aa11.82□□□□□ -0.52
SNCA-209ENST00000506244 H2AFB1P0C5Y9 115 aa11.82□□□□□ -0.52
SNCA-209ENST00000506244 TCL1AP56279 114 aa11.82□□□□□ -0.52
SNCA-209ENST00000506244 SAPCD1Q5SSQ6 148 aa11.82□□□□□ -0.52
SNCA-209ENST00000506244 LINC00612Q8N6U2 182 aa11.82□□□□□ -0.52
SNCA-209ENST00000506244 C11orf72Q8NBR9 251 aa11.82□□□□□ -0.52
SNCA-209ENST00000506244 GSN-AS1Q9NRJ2 163 aa11.82□□□□□ -0.52
SNCA-209ENST00000506244 MUC21Q5SSG8 566 aa11.81□□□□□ -0.52
SNCA-209ENST00000506244 CST9LP1Q5W188 147 aa11.81□□□□□ -0.52
SNCA-209ENST00000506244 C15orf53Q8NAA6 179 aa11.81□□□□□ -0.52
SNCA-209ENST00000506244 NAGKQ9UJ70 344 aa11.81□□□□□ -0.52
SNCA-209ENST00000506244 RYR3Q15413 4870 aa11.8□□□□□ -0.52
SNCA-209ENST00000506244 F5H768 121 aa11.8□□□□□ -0.52
SNCA-209ENST00000506244 TDRG1Q3Y452 100 aa11.8□□□□□ -0.52
SNCA-209ENST00000506244 SMUG1Q53HV7 270 aa11.8□□□□□ -0.52
SNCA-209ENST00000506244 PRNTQ86SH4 94 aa11.8□□□□□ -0.52
SNCA-209ENST00000506244 TVP23CQ96ET8 276 aa11.8□□□□□ -0.52
SNCA-209ENST00000506244 KCNS1Q96KK3 526 aa11.8□□□□□ -0.52
SNCA-209ENST00000506244 SGK494Q96LW2 274 aa11.8□□□□□ -0.52
SNCA-209ENST00000506244 RYR2Q92736 4967 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 TRGV1A0A0A0MS02 117 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 GAGE12BA1L429 117 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 GAGE7O76087 117 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 IGLV2-11P01706 119 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 GAGE12FP0CL80 117 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 GAGE12GP0CL81 117 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 GAGE12IP0CL82 117 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 P0DMU3 169 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 FAM231AP0DMU4 169 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 FAM231CP0DMU5 169 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 LGALS9BQ3B8N2 356 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 TMEM88Q6PEY1 159 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 Q86TA4 180 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 C9orf62Q8N4C0 152 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 FMC1Q96HJ9 113 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 SDF2L1Q9HCN8 221 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 KLF12Q9Y4X4 402 aa11.79□□□□□ -0.52
SNCA-209ENST00000506244 TRGV2A0A075B6R0 118 aa11.78□□□□□ -0.52
SNCA-209ENST00000506244 A0A1B0GV50 99 aa11.78□□□□□ -0.52
SNCA-209ENST00000506244 PFN1P07737 140 aaKnown RBP11.78□□□□□ -0.52
SNCA-209ENST00000506244 SULT1A2P50226 295 aa11.78□□□□□ -0.52
SNCA-209ENST00000506244 UBE2G1P62253 170 aa11.78□□□□□ -0.52
SNCA-209ENST00000506244 TMEM183BQ1AE95 376 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms