RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 ZFAND2AQ8N6M9 145 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 STOML3Q8TAV4 291 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 TMED6Q8WW62 240 aa8.03□□□□□ -1.12
ERCC8-208ENST00000497892 KLK5Q9Y337 293 aaPredicted RBP8.03□□□□□ -1.12
ERCC8-208ENST00000497892 MAP1LC3B2A6NCE7 125 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 UMAD1C9J7I0 102 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 TPT1P13693 172 aaKnown RBP8.02□□□□□ -1.13
ERCC8-208ENST00000497892 AZU1P20160 251 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 CD300CQ08708 224 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 BTN1A1Q13410 526 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 PRR9Q5T870 116 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 ZNF493Q6ZR52 646 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 ZNF767PQ75MW2 155 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 IQCF2Q8IXL9 164 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 C5orf17Q8NAS9 161 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 RNASE8Q8TDE3 154 aaKnown RBP8.02□□□□□ -1.13
ERCC8-208ENST00000497892 TMEM263Q8WUH6 116 aaKnown RBP8.02□□□□□ -1.13
ERCC8-208ENST00000497892 C16orf74Q96GX8 76 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 PYGO2Q9BRQ0 406 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 NIPSNAP3BQ9BS92 247 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 MAP1LC3BQ9GZQ8 125 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 RPH3ALQ9UNE2 315 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 LENEPQ9Y5L5 61 aa8.02□□□□□ -1.13
ERCC8-208ENST00000497892 PLECQ15149 4684 aaKnown RBP8.02□□□□□ -1.13
ERCC8-208ENST00000497892 RYR3Q15413 4870 aa8.01□□□□□ -1.13
ERCC8-208ENST00000497892 TRAV10A0A0B4J240 114 aa8.01□□□□□ -1.13
ERCC8-208ENST00000497892 SERTM2A0A1B0GWG4 89 aa8.01□□□□□ -1.13
ERCC8-208ENST00000497892 A0A1W2PRE2 83 aa8.01□□□□□ -1.13
ERCC8-208ENST00000497892 GPX1P07203 203 aa8.01□□□□□ -1.13
ERCC8-208ENST00000497892 HTN1P15515 57 aa8.01□□□□□ -1.13
ERCC8-208ENST00000497892 FHITP49789 147 aa8.01□□□□□ -1.13
ERCC8-208ENST00000497892 FGF8P55075 233 aaPredicted RBP8.01□□□□□ -1.13
ERCC8-208ENST00000497892 GNG5P63218 68 aa8.01□□□□□ -1.13
ERCC8-208ENST00000497892 LGALSLQ3ZCW2 172 aaPredicted RBP8.01□□□□□ -1.13
ERCC8-208ENST00000497892 GOLT1AQ6ZVE7 132 aa8.01□□□□□ -1.13
ERCC8-208ENST00000497892 LINC00467Q9BRT7 94 aa8.01□□□□□ -1.13
ERCC8-208ENST00000497892 ALMS1Q8TCU4 4167 aa8□□□□□ -1.13
ERCC8-208ENST00000497892 LYRM9A8MSI8 78 aa8□□□□□ -1.13
ERCC8-208ENST00000497892 ZNF324O75467 553 aaPredicted RBP8□□□□□ -1.13
ERCC8-208ENST00000497892 TCRAP04437 139 aa8□□□□□ -1.13
ERCC8-208ENST00000497892 RNASE4P34096 147 aaKnown RBP8□□□□□ -1.13
ERCC8-208ENST00000497892 DPPA3Q6W0C5 159 aa8□□□□□ -1.13
ERCC8-208ENST00000497892 C2CD4CQ8TF44 421 aa8□□□□□ -1.13
ERCC8-208ENST00000497892 TMPRSS5Q9H3S3 457 aa8□□□□□ -1.13
ERCC8-208ENST00000497892 SACSQ9NZJ4 4579 aa8□□□□□ -1.13
ERCC8-208ENST00000497892 DEFB131BA0A096LNP1 70 aa7.99□□□□□ -1.13
ERCC8-208ENST00000497892 TRAV8-1A0A0A6YYK1 113 aa7.99□□□□□ -1.13
ERCC8-208ENST00000497892 A0A1B0GVG6 124 aa7.99□□□□□ -1.13
ERCC8-208ENST00000497892 TCTAP57738 103 aa7.99□□□□□ -1.13
ERCC8-208ENST00000497892 SUMO1P63165 101 aaKnown RBP7.99□□□□□ -1.13
ERCC8-208ENST00000497892 CCDC28AQ8IWP9 274 aa7.99□□□□□ -1.13
ERCC8-208ENST00000497892 FAM213BQ8TBF2 198 aa7.99□□□□□ -1.13
ERCC8-208ENST00000497892 ATG101Q9BSB4 218 aa7.99□□□□□ -1.13
ERCC8-208ENST00000497892 EPDR1Q9UM22 224 aa7.99□□□□□ -1.13
ERCC8-208ENST00000497892 RYR2Q92736 4967 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 FAM74A7A6NL05 159 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 K7EQM0 130 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 UBE2G2P60604 165 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 DAD1P61803 113 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 ZFP69Q49AA0 526 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 Q6AWC8 147 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 EIF5AL1Q6IS14 154 aaKnown RBP7.98□□□□□ -1.13
ERCC8-208ENST00000497892 Q6ZQT7 251 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 C9orf62Q8N4C0 152 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 EIF4E3Q8N5X7 224 aaKnown RBP7.98□□□□□ -1.13
ERCC8-208ENST00000497892 CYB561D1Q8N8Q1 229 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 ZNF680Q8NEM1 530 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 MBD3L1Q8WWY6 194 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 LINC00476Q8WZB0 136 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 TVP23CQ96ET8 276 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 NKX6-2Q9C056 277 aaPredicted RBP7.98□□□□□ -1.13
ERCC8-208ENST00000497892 TIMM8BQ9Y5J9 83 aaPredicted RBP7.98□□□□□ -1.13
ERCC8-208ENST00000497892 ARL2-SNX15V9GYD0 113 aa7.98□□□□□ -1.13
ERCC8-208ENST00000497892 FBLL1A6NHQ2 334 aaKnown RBP7.97□□□□□ -1.13
ERCC8-208ENST00000497892 CBY3A6NI87 242 aa7.97□□□□□ -1.13
ERCC8-208ENST00000497892 IGLV2-11P01706 119 aa7.97□□□□□ -1.13
ERCC8-208ENST00000497892 ANXA2RQ3ZCQ2 193 aa7.97□□□□□ -1.13
ERCC8-208ENST00000497892 SLC51BQ86UW2 128 aa7.97□□□□□ -1.13
ERCC8-208ENST00000497892 TMEM75Q8N9X5 138 aa7.97□□□□□ -1.13
ERCC8-208ENST00000497892 C11orf72Q8NBR9 251 aa7.97□□□□□ -1.13
ERCC8-208ENST00000497892 SFT2D1Q8WV19 159 aa7.97□□□□□ -1.13
ERCC8-208ENST00000497892 TREM1Q9NP99 234 aa7.97□□□□□ -1.13
ERCC8-208ENST00000497892 NOP10Q9NPE3 64 aaKnown RBP7.97□□□□□ -1.13
ERCC8-208ENST00000497892 DNAH1Q9P2D7 4330 aa7.97□□□□□ -1.13
ERCC8-208ENST00000497892 IGHV4-4A0A075B6R2 117 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 IGHV1OR15-1A0A075B7D0 117 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 SNURFLB1AK76 121 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 IGLL5B9A064 214 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 RGS13O14921 159 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 IFNA7P01567 189 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 DEFB130BP0DP73 79 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 DEFB130AP0DP74 79 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 RAB5CP51148 216 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 FLI1Q01543 452 aaPredicted RBP7.96□□□□□ -1.14
ERCC8-208ENST00000497892 DAZ2Q13117 558 aaKnown RBP7.96□□□□□ -1.14
ERCC8-208ENST00000497892 IBA57Q5T440 356 aaKnown RBP7.96□□□□□ -1.14
ERCC8-208ENST00000497892 LINC00612Q8N6U2 182 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 SGK494Q96LW2 274 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 TCEAL7Q9BRU2 100 aa7.96□□□□□ -1.14
ERCC8-208ENST00000497892 NDFIP1Q9BT67 221 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms