RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 RABAC1Q9UI14 185 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 HIGD1AQ9Y241 93 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 HECTD4Q9Y4D8 3996 aa4.63□□□□□ -1.67
VIM-207ENST00000495528 K7EMT4 169 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 HMGB3O15347 200 aaKnown RBP4.62□□□□□ -1.67
VIM-207ENST00000495528 MBP02144 154 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 M6PRP20645 277 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 PLP1P60201 277 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 IFITM2Q01629 132 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 USF2Q15853 346 aaPredicted RBP4.62□□□□□ -1.67
VIM-207ENST00000495528 TMEM41BQ5BJD5 291 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 FAM74A1Q5RGS3 127 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 FAM78BQ5VT40 261 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 SPATA31B1PQ5VZV4 182 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 LEMD1Q68G75 181 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 TEX261Q6UWH6 196 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 MIR17HGQ75NE6 70 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 LINC00305Q7Z4B0 112 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 Q8NBF4 154 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 ZNF680Q8NEM1 530 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 MARC2Q969Z3 335 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 METTL26Q96S19 204 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 PFDN5Q99471 154 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 ALKBH7Q9BT30 221 aaPredicted RBP4.62□□□□□ -1.67
VIM-207ENST00000495528 SLC25A39Q9BZJ4 359 aaPredicted RBP4.62□□□□□ -1.67
VIM-207ENST00000495528 KCNIP2Q9NS61 270 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 UFC1Q9Y3C8 167 aa4.62□□□□□ -1.67
VIM-207ENST00000495528 A0A087WZ39 114 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 KIR2DL5BA0A0G2JN68 375 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 KIR2DL5BA0A0G2JPC4 375 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 ZNF98A6NK75 572 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 UMAD1C9J7I0 102 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 IFNA7P01567 189 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 SNRPCP09234 159 aaKnown RBP4.61□□□□□ -1.67
VIM-207ENST00000495528 CRYBB3P26998 211 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 FHITP49789 147 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 SULT1A2P50226 295 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 RHOBP62745 196 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 SRSF9Q13242 221 aaKnown RBP eCLIP4.61□□□□□ -1.67
VIM-207ENST00000495528 LCN15Q6UWW0 184 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 KIR2DL5AQ8N109 375 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 KIR2DL5BQ8NHK3 375 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 FAM213BQ8TBF2 198 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 PCNPQ8WW12 178 aaKnown RBP4.61□□□□□ -1.67
VIM-207ENST00000495528 SPAG8Q99932 426 aaPredicted RBP4.61□□□□□ -1.67
VIM-207ENST00000495528 RHPN1-AS1Q9BWJ2 59 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 SCRT1Q9BWW7 348 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 ACTR3CQ9C0K3 210 aaPredicted RBP4.61□□□□□ -1.67
VIM-207ENST00000495528 SLC25A22Q9H936 323 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 SMPXQ9UHP9 88 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 FUT9Q9Y231 359 aa4.61□□□□□ -1.67
VIM-207ENST00000495528 DNAH6Q9C0G6 4158 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 IGKV3-7A0A075B6H7 116 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 IGHV7-4-1A0A0J9YVY3 117 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 A0A1B0GV50 99 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 C5orf52A6NGY3 159 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 ZNF705EA8MWA4 302 aaPredicted RBP4.6□□□□□ -1.67
VIM-207ENST00000495528 SOCS3O14543 225 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 CHEK1O14757 476 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 S100A7P31151 101 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 CDC34P49427 236 aaPredicted RBP4.6□□□□□ -1.67
VIM-207ENST00000495528 ZNF726P1Q15940 193 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 SSX7Q7RTT5 188 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 S100A7AQ86SG5 101 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 APRG1Q8IVJ8 170 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 OR8I2Q8N0Y5 310 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 SFT2D1Q8WV19 159 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 PHYHIPLQ96FC7 376 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 NARS2Q96I59 477 aaKnown RBP4.6□□□□□ -1.67
VIM-207ENST00000495528 RNF2Q99496 336 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 RARRES2Q99969 163 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 SHANK2-AS3Q9BTD1 123 aa4.6□□□□□ -1.67
VIM-207ENST00000495528 DAZ1Q9NQZ3 744 aaKnown RBP4.6□□□□□ -1.67
VIM-207ENST00000495528 DYNC1H1Q14204 4646 aaKnown RBP4.6□□□□□ -1.67
VIM-207ENST00000495528 CTXND1A0A1B0GTU2 59 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 H3BRN7 92 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 H3BTX0 84 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 DEFB4AO15263 64 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 OR7C2O60412 319 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 OR10J4P0C629 311 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 RAB5CP51148 216 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 FGF8P55075 233 aaPredicted RBP4.59□□□□□ -1.67
VIM-207ENST00000495528 CCL20P78556 96 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 DPPA3Q6W0C5 159 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 TCF24Q7RTU0 167 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 IQCF2Q8IXL9 164 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 BLNKQ8WV28 456 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 MBD3L1Q8WWY6 194 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 FAM167A-AS1Q96KT0 104 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 PAXXQ9BUH6 204 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 SLC25A2Q9BXI2 301 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 MRPL32Q9BYC8 188 aaKnown RBP4.59□□□□□ -1.67
VIM-207ENST00000495528 OR51M1Q9H341 326 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 FAT2Q9NYQ8 4349 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 DNAH2Q9P225 4427 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 APLNQ9ULZ1 77 aa4.59□□□□□ -1.67
VIM-207ENST00000495528 DNAH17Q9UFH2 4485 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 MAP1LC3B2A6NCE7 125 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 OR4C46A6NHA9 309 aa4.58□□□□□ -1.68
VIM-207ENST00000495528 H3BQ15 152 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms