RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ORM1P02763 201 aa11.86□□□□□ -0.51
SDF4-207ENST00000494748 SIGMAR1Q99720 223 aa11.86□□□□□ -0.51
SDF4-207ENST00000494748 SPAG8Q99932 426 aaPredicted RBP11.86□□□□□ -0.51
SDF4-207ENST00000494748 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 CTSGP08311 255 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 DYNLRB1Q9NP97 96 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 H3BMG7 143 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 SH2D6Q7Z4S9 175 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 DEFB124Q8NES8 71 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 SVEP1Q4LDE5 3571 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 A0A1B0GWB2 263 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 FABP5P3A8MUU1 101 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.85□□□□□ -0.51
SDF4-207ENST00000494748 SMAGPQ0VAQ4 97 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 TAL2Q16559 108 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 IL17RELQ6ZVW7 336 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 ARPC1AQ92747 370 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 TMEM160Q9NX00 188 aa11.85□□□□□ -0.51
SDF4-207ENST00000494748 CCDC144NLQ6NUI1 221 aa11.84□□□□□ -0.51
SDF4-207ENST00000494748 TTC9CQ8N5M4 171 aa11.84□□□□□ -0.51
SDF4-207ENST00000494748 ZNF479Q96JC4 524 aa11.84□□□□□ -0.51
SDF4-207ENST00000494748 LY6G5BQ8NDX9 201 aa11.84□□□□□ -0.51
SDF4-207ENST00000494748 C21orf62Q9NYP8 219 aa11.84□□□□□ -0.51
SDF4-207ENST00000494748 IGHV7-4-1A0A0J9YVY3 117 aa11.83□□□□□ -0.51
SDF4-207ENST00000494748 A0A087WX48 190 aa11.83□□□□□ -0.52
SDF4-207ENST00000494748 C5orf64Q2M2E5 130 aa11.83□□□□□ -0.52
SDF4-207ENST00000494748 INSL3P51460 131 aa11.83□□□□□ -0.52
SDF4-207ENST00000494748 AMTNQ6UX39 209 aa11.83□□□□□ -0.52
SDF4-207ENST00000494748 IGF2-ASQ6U949 168 aa11.82□□□□□ -0.52
SDF4-207ENST00000494748 ZFHX3Q15911 3703 aa11.82□□□□□ -0.52
SDF4-207ENST00000494748 TRAV26-2A0A0B4J265 109 aa11.82□□□□□ -0.52
SDF4-207ENST00000494748 ETDBQ3ZM63 59 aa11.82□□□□□ -0.52
SDF4-207ENST00000494748 OR11H6Q8NGC7 330 aa11.82□□□□□ -0.52
SDF4-207ENST00000494748 RNF182Q8N6D2 247 aa11.82□□□□□ -0.52
SDF4-207ENST00000494748 RRN3P1Q2M238 152 aa11.81□□□□□ -0.52
SDF4-207ENST00000494748 Q6ZQT7 251 aa11.81□□□□□ -0.52
SDF4-207ENST00000494748 COL6A6A6NMZ7 2263 aa11.81□□□□□ -0.52
SDF4-207ENST00000494748 IGHV3OR16-8A0A075B7F1 116 aa11.81□□□□□ -0.52
SDF4-207ENST00000494748 LINC01619G3V211 115 aa11.81□□□□□ -0.52
SDF4-207ENST00000494748 MORN3Q6PF18 240 aaPredicted RBP11.81□□□□□ -0.52
SDF4-207ENST00000494748 EFNA4P52798 201 aa11.81□□□□□ -0.52
SDF4-207ENST00000494748 LAGE3Q14657 143 aa11.81□□□□□ -0.52
SDF4-207ENST00000494748 MTURNQ8N3F0 131 aa11.81□□□□□ -0.52
SDF4-207ENST00000494748 ODF3BA8MYP8 253 aa11.8□□□□□ -0.52
SDF4-207ENST00000494748 KLRD1Q13241 179 aa11.8□□□□□ -0.52
SDF4-207ENST00000494748 ZNF502Q8TBZ5 544 aa11.8□□□□□ -0.52
SDF4-207ENST00000494748 ONECUT1Q9UBC0 465 aa11.8□□□□□ -0.52
SDF4-207ENST00000494748 DPM3Q9P2X0 92 aa11.8□□□□□ -0.52
SDF4-207ENST00000494748 RBAKDNA6NC62 111 aa11.8□□□□□ -0.52
SDF4-207ENST00000494748 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.8□□□□□ -0.52
SDF4-207ENST00000494748 ZFAND3Q9H8U3 227 aa11.8□□□□□ -0.52
SDF4-207ENST00000494748 Q8N6K4 173 aa11.79□□□□□ -0.52
SDF4-207ENST00000494748 ANKRD11Q6UB99 2663 aaPredicted RBP11.79□□□□□ -0.52
SDF4-207ENST00000494748 NDUFS8O00217 210 aa11.78□□□□□ -0.52
SDF4-207ENST00000494748 MSRB2Q9Y3D2 182 aa11.78□□□□□ -0.52
SDF4-207ENST00000494748 RELNP78509 3460 aa11.78□□□□□ -0.52
SDF4-207ENST00000494748 IGHV4-4A0A075B6R2 117 aa11.78□□□□□ -0.52
SDF4-207ENST00000494748 AGPAT4-IT1Q9H0P7 198 aa11.78□□□□□ -0.52
SDF4-207ENST00000494748 SH3BGRL2Q9UJC5 107 aa11.78□□□□□ -0.52
SDF4-207ENST00000494748 HRNRQ86YZ3 2850 aaPredicted RBP11.78□□□□□ -0.52
SDF4-207ENST00000494748 CLPSL1A2RUU4 121 aa11.78□□□□□ -0.52
SDF4-207ENST00000494748 PLNP26678 52 aa11.78□□□□□ -0.52
SDF4-207ENST00000494748 SMCPP49901 116 aaPredicted RBP11.78□□□□□ -0.52
SDF4-207ENST00000494748 ATP6V0BQ99437 205 aa11.78□□□□□ -0.52
SDF4-207ENST00000494748 OTOGLQ3ZCN5 2332 aa11.77□□□□□ -0.52
SDF4-207ENST00000494748 TRAV8-2A0A0B4J237 113 aa11.77□□□□□ -0.52
SDF4-207ENST00000494748 TRAV12-1A0A0B4J245 112 aa11.77□□□□□ -0.52
SDF4-207ENST00000494748 IGHV3-35A0A0C4DH35 117 aa11.77□□□□□ -0.52
SDF4-207ENST00000494748 BUB3O43684 328 aa11.77□□□□□ -0.52
SDF4-207ENST00000494748 B9A039 149 aa11.77□□□□□ -0.53
SDF4-207ENST00000494748 GAGE13Q4V321 117 aa11.77□□□□□ -0.53
SDF4-207ENST00000494748 MYOZ3Q8TDC0 251 aa11.77□□□□□ -0.53
SDF4-207ENST00000494748 HIST1H4GQ99525 98 aa11.77□□□□□ -0.53
SDF4-207ENST00000494748 ATP5G2Q06055 141 aa11.77□□□□□ -0.53
SDF4-207ENST00000494748 SPG11Q96JI7 2443 aa11.77□□□□□ -0.53
SDF4-207ENST00000494748 MYMXA0A1B0GTQ4 84 aa11.76□□□□□ -0.53
SDF4-207ENST00000494748 RNF223E7ERA6 249 aa11.76□□□□□ -0.53
SDF4-207ENST00000494748 F8VRH5 84 aa11.76□□□□□ -0.53
SDF4-207ENST00000494748 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.75□□□□□ -0.538e-7■□□□□ 10.8
SDF4-207ENST00000494748 LGALS1P09382 135 aaKnown RBP11.75□□□□□ -0.53
SDF4-207ENST00000494748 NEXN-AS1Q8NBZ9 246 aa11.75□□□□□ -0.53
SDF4-207ENST00000494748 ZFHX2Q9C0A1 2572 aaPredicted RBP11.75□□□□□ -0.53
SDF4-207ENST00000494748 IGHV7-81A0A0B4J1V7 117 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 H7C1H1 209 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 FHL3Q13643 280 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 HES1Q14469 280 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 CLUHP3Q96NS8 147 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 NCBP2LA6PVI3 153 aaKnown RBP11.74□□□□□ -0.53
SDF4-207ENST00000494748 CFAP126Q5VTH2 177 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 LCNL1Q6ZST4 164 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 Q8NA96 180 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 SMIM2Q9BVW6 85 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 CDIP1Q9H305 208 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 DOPEY2Q9Y3R5 2298 aa11.74□□□□□ -0.53
SDF4-207ENST00000494748 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.73□□□□□ -0.53
SDF4-207ENST00000494748 J3QR89 54 aa11.73□□□□□ -0.53
SDF4-207ENST00000494748 KLK9Q2XQG4 91 aa11.73□□□□□ -0.53
SDF4-207ENST00000494748 PRR9Q5T870 116 aa11.73□□□□□ -0.53
SDF4-207ENST00000494748 KLK9Q9UKQ9 250 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms