RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 IGHV3-35A0A0C4DH35 117 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 GAGE12BA1L429 117 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 HMGB3O15347 200 aaKnown RBP5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 ZNF207O43670 478 aaKnown RBP5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 YIF1AO95070 293 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 VPREB1P12018 145 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 TCL1AP56279 114 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 ZNF415Q09FC8 603 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 ARL16Q0P5N6 197 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 GBGT1Q8N5D6 347 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 OR5A1Q8NGJ0 315 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 TMEM190Q8WZ59 177 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 NPCDR1Q9BY65 106 aa5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 KLK5Q9Y337 293 aaPredicted RBP5.8□□□□□ -1.48
SEMA3F-209ENST00000493743 UBE2L5PA0A1B0GUS4 154 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 OR4C46A6NHA9 309 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 ZNF705GA8MUZ8 300 aaPredicted RBP5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 M0R2Z0 102 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 EVI2AP22794 236 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 AMTP48728 403 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 RPS28P62857 69 aaKnown RBP5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 TMEM183BQ1AE95 376 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 ACOT6Q3I5F7 207 aaPredicted RBP5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 FAM162BQ5T6X4 162 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 TMEM183AQ8IXX5 376 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 STPG3Q8N7X2 389 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 OR10G9Q8NGN4 311 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 TMEM170AQ8WVE7 144 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 MBD3L1Q8WWY6 194 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 TMEM18Q96B42 140 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 RNF183Q96D59 192 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 SPANXDQ9BXN6 97 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 CTDSP1Q9GZU7 261 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 DAZ1Q9NQZ3 744 aaKnown RBP5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 ZNF586Q9NXT0 402 aa5.79□□□□□ -1.48
SEMA3F-209ENST00000493743 A0A1W2PRE2 83 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 OR2T8A6NH00 312 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 IFITM10A6NMD0 228 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 NDUFA4O00483 81 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 FABP4P15090 132 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 PAFAH1B2P68402 229 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 AKR1C1Q04828 323 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 SMAGPQ0VAQ4 97 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 ODF3L2Q3SX64 289 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 SPINK9Q5DT21 86 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 SPSB3Q6PJ21 355 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 CD164L2Q6UWJ8 174 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 Q6ZRG5 221 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 STHQ8IWL8 128 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 THAP8Q8NA92 274 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 FER1L6-AS1Q8NA97 138 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 OR4X1Q8NH49 305 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 GRAMD2BQ96HH9 432 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 TRGV9Q99603 122 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 SAMD10Q9BYL1 202 aa5.78□□□□□ -1.48
SEMA3F-209ENST00000493743 CTXND1A0A1B0GTU2 59 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 GAGE12JA6NER3 117 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 NPIPB6E9PJ23 425 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 K7EMT4 169 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 AGPAT2O15120 278 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 GAGE7O76087 117 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 GAGE12FP0CL80 117 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 GAGE12GP0CL81 117 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 GAGE12IP0CL82 117 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 RPL35AP18077 110 aaKnown RBP5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 PRR20EP86478 221 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 PRR20CP86479 221 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 PRR20DP86480 221 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 PRR20BP86481 221 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 PRR20AP86496 221 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 HSD52Q0P140 79 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 GAGE4Q13068 117 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 COA6Q5JTJ3 125 aaKnown RBP5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 ZNRF2Q8NHG8 242 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 GATAD1Q8WUU5 269 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 HIST1H2BLQ99880 126 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 TXNDC17Q9BRA2 123 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 MAP1LC3AQ9H492 121 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 FNDC4Q9H6D8 234 aaPredicted RBP5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 MAP6D1Q9H9H5 199 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 SLC39A9Q9NUM3 307 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 C21orf62Q9NYP8 219 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 PRO0628Q9UI54 55 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 LAMTOR2Q9Y2Q5 125 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 MRPS16Q9Y3D3 137 aaKnown RBP5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 ARL2-SNX15V9GYD0 113 aa5.77□□□□□ -1.49
SEMA3F-209ENST00000493743 IGHV3OR16-8A0A075B7F1 116 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 A0A087WX48 190 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 A0A1B0GX51 115 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 I3L2K1 104 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 ADMP35318 185 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 MFAP2P55001 183 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 CMC4P56277 68 aaPredicted RBP5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 TAS2R45P59539 299 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 Q56UQ5 140 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 FFAR4Q5NUL3 377 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 LGALS9CQ6DKI2 356 aa5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 RPP25LQ8N5L8 163 aaKnown RBP5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 PHLDA1Q8WV24 401 aaPredicted RBP5.76□□□□□ -1.49
SEMA3F-209ENST00000493743 ACY3Q96HD9 319 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms