RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 A0A1W2PRE2 83 aa7.56□□□□□ -1.2
CDC42SE1-206ENST00000492796 K7EQM0 130 aa7.56□□□□□ -1.2
CDC42SE1-206ENST00000492796 RGS13O14921 159 aa7.56□□□□□ -1.2
CDC42SE1-206ENST00000492796 PFDN1O60925 122 aa7.56□□□□□ -1.2
CDC42SE1-206ENST00000492796 ANXA2RQ3ZCQ2 193 aa7.56□□□□□ -1.2
CDC42SE1-206ENST00000492796 IQCF2Q8IXL9 164 aa7.56□□□□□ -1.2
CDC42SE1-206ENST00000492796 ZNF471Q9BX82 626 aaPredicted RBP7.56□□□□□ -1.2
CDC42SE1-206ENST00000492796 NOP10Q9NPE3 64 aaKnown RBP7.56□□□□□ -1.2
CDC42SE1-206ENST00000492796 MAP1LC3B2A6NCE7 125 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 FBLL1A6NHQ2 334 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 CBY3A6NI87 242 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 GGTLC3B5MD39 225 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 UMAD1C9J7I0 102 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 TCRAP04437 139 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 ATP5G1P05496 136 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 DEFB130BP0DP73 79 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 DEFB130AP0DP74 79 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 TPT1P13693 172 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 ATP5G3P48201 142 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 GNG5P63218 68 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 DAZ2Q13117 558 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 IBA57Q5T440 356 aaKnown RBP7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 Q6AWC8 147 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 LINC00612Q8N6U2 182 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 NDFIP1Q9BT67 221 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 NKX6-2Q9C056 277 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 MAP1LC3BQ9GZQ8 125 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 PLA2G2EQ9NZK7 142 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 SACSQ9NZJ4 4579 aa7.55□□□□□ -1.2
CDC42SE1-206ENST00000492796 IGHV1OR15-1A0A075B7D0 117 aa7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 HTN3P15516 51 aa7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 DPPA3Q6W0C5 159 aa7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 TMUB2Q71RG4 321 aa7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 CYB561D1Q8N8Q1 229 aa7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 TMEM75Q8N9X5 138 aa7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 C11orf72Q8NBR9 251 aa7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 STOML3Q8TAV4 291 aa7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 ATG101Q9BSB4 218 aa7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 EPDR1Q9UM22 224 aa7.54□□□□□ -1.2
CDC42SE1-206ENST00000492796 RYR2Q92736 4967 aa7.53□□□□□ -1.2
CDC42SE1-206ENST00000492796 TRAV8-1A0A0A6YYK1 113 aa7.53□□□□□ -1.2
CDC42SE1-206ENST00000492796 C1QBP02746 253 aa7.53□□□□□ -1.2
CDC42SE1-206ENST00000492796 FGF8P55075 233 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE1-206ENST00000492796 TCL1AP56279 114 aa7.53□□□□□ -1.2
CDC42SE1-206ENST00000492796 AKAP14Q86UN6 197 aa7.53□□□□□ -1.2
CDC42SE1-206ENST00000492796 TMPRSS5Q9H3S3 457 aa7.53□□□□□ -1.2
CDC42SE1-206ENST00000492796 TREM1Q9NP99 234 aa7.53□□□□□ -1.2
CDC42SE1-206ENST00000492796 ARL2-SNX15V9GYD0 113 aa7.53□□□□□ -1.2
CDC42SE1-206ENST00000492796 TRGV11A0A075B6L2 103 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 TRAV21A0A0B4J279 112 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 FAM74A7A6NL05 159 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 F5H768 121 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 P0DMU3 169 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 FAM231AP0DMU4 169 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 FAM231CP0DMU5 169 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 FHITP49789 147 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 FLI1Q01543 452 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 ZNF415Q09FC8 603 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 ZFP69Q49AA0 526 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 EIF5AL1Q6IS14 154 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 TMEM88Q6PEY1 159 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 FAM159AQ6UWV7 190 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 C15orf53Q8NAA6 179 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 FAM213BQ8TBF2 198 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 HIST1H2BAQ96A08 127 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 C18orf15Q96N68 181 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 TCEAL7Q9BRU2 100 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 GSN-AS1Q9NRJ2 163 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 PSG8Q9UQ74 426 aa7.52□□□□□ -1.21
CDC42SE1-206ENST00000492796 GAGE12BA1L429 117 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 F6UZH7 168 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 SPINK4O60575 86 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 GAGE7O76087 117 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 IFNA7P01567 189 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 IGLV2-11P01706 119 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 GAGE12FP0CL80 117 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 GAGE12GP0CL81 117 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 GAGE12IP0CL82 117 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 PPT1P50897 306 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 UBE2G2P60604 165 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 LGALS9BQ3B8N2 356 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 TDRG1Q3Y452 100 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 LGALSLQ3ZCW2 172 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 Q6ZQT7 251 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 MBD3L1Q8WWY6 194 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 TVP23CQ96ET8 276 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 TP53TG3Q9ULZ0 132 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 KLF12Q9Y4X4 402 aa7.51□□□□□ -1.21
CDC42SE1-206ENST00000492796 hCG_2014768A0A024R1R8 64 aa7.5□□□□□ -1.21
CDC42SE1-206ENST00000492796 TRGV1A0A0A0MS02 117 aa7.5□□□□□ -1.21
CDC42SE1-206ENST00000492796 PEX7O00628 323 aa7.5□□□□□ -1.21
CDC42SE1-206ENST00000492796 RAB5CP51148 216 aa7.5□□□□□ -1.21
CDC42SE1-206ENST00000492796 MUC21Q5SSG8 566 aa7.5□□□□□ -1.21
CDC42SE1-206ENST00000492796 SAPCD1Q5SSQ6 148 aa7.5□□□□□ -1.21
CDC42SE1-206ENST00000492796 Q6ZTI0 123 aa7.5□□□□□ -1.21
CDC42SE1-206ENST00000492796 PRNTQ86SH4 94 aa7.5□□□□□ -1.21
CDC42SE1-206ENST00000492796 SFT2D1Q8WV19 159 aa7.5□□□□□ -1.21
CDC42SE1-206ENST00000492796 KCNS1Q96KK3 526 aa7.5□□□□□ -1.21
CDC42SE1-206ENST00000492796 SGK494Q96LW2 274 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms