RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CTDSPLO15194 276 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 IL4P05112 153 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 SPART-AS1P0CW21 52 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 HLA-DRB4P13762 266 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 FABP4P15090 132 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 GNG4P50150 75 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 RHOBP62745 196 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 C12orf74Q32Q52 190 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 TMEM97Q5BJF2 176 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 DGAT2L7PQ6IED9 249 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 FAM159AQ6UWV7 190 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 SIGLEC15Q6ZMC9 328 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 OR10G4Q8NGN3 311 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 SCGB3A2Q96PL1 93 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 CACNG5Q9UF02 275 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 TNFSF18Q9UNG2 199 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 V9GYY9 64 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 HLA-DRB4X5D2U9 266 aa6.57□□□□□ -1.36
HDAC3-212ENST00000492407 A0A0D9SG52 128 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 GAGE12BA1L429 117 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 ZNF705FA8MVS1 300 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-212ENST00000492407 ZNF705DP0CH99 300 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-212ENST00000492407 ZNF705BP0CI00 300 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-212ENST00000492407 ATP6V0CP27449 155 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 RPL24P83731 157 aaKnown RBP6.56□□□□□ -1.36
HDAC3-212ENST00000492407 KLF9Q13886 244 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-212ENST00000492407 LGALS9BQ3B8N2 356 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 OR8I2Q8N0Y5 310 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 OR51G1Q8NGK1 321 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 OR2T35Q8NGX2 323 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 TMEM170AQ8WVE7 144 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 SMIM4Q8WVI0 70 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 NPIPB3Q92617 1050 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 BTF3L4Q96K17 158 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 YPEL4Q96NS1 127 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 SOSTQ9BQB4 213 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 NAT8BQ9UHF3 227 aa6.56□□□□□ -1.36
HDAC3-212ENST00000492407 MRPS16Q9Y3D3 137 aaKnown RBP6.56□□□□□ -1.36
HDAC3-212ENST00000492407 A0A0B4J2A0 478 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 HSBP1O75506 76 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 SIX6O95475 246 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 MBPP02686 304 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-212ENST00000492407 AKAIN1P0CW23 69 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 CXCL2P19875 107 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 PSMB3P49720 205 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 SULT1A1P50225 295 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 SULT1A2P50226 295 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 S100A10P60903 97 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 SRPXP78539 464 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 MRPL23Q16540 153 aaKnown RBP6.55□□□□□ -1.36
HDAC3-212ENST00000492407 FAM162BQ5T6X4 162 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 FOXI2Q6ZQN5 318 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 NEGR1Q7Z3B1 354 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 TMEM18Q96B42 140 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 SHPKQ9UHJ6 478 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 RFNGQ9Y644 331 aa6.55□□□□□ -1.36
HDAC3-212ENST00000492407 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 MAP1LC3B2A6NCE7 125 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 ZNF705GA8MUZ8 300 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-212ENST00000492407 SNRPGP15A8MWD9 76 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 ISLRO14498 428 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 NXPH3O95157 252 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 MED14OSP0DP75 135 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
HDAC3-212ENST00000492407 SUPT4H1P63272 117 aaKnown RBP6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HSD52Q0P140 79 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 OR2F1Q13607 317 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 RNASE12Q5GAN4 147 aaKnown RBP6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-212ENST00000492407 GTF2H5Q6ZYL4 71 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 ACY3Q96HD9 319 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 MAP1LC3BQ9GZQ8 125 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 XCL2Q9UBD3 114 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 SLC45A2Q9UMX9 530 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 CELA1Q9UNI1 258 aa6.54□□□□□ -1.36
HDAC3-212ENST00000492407 A0A087WWC5 75 aa6.53□□□□□ -1.36
HDAC3-212ENST00000492407 DUXBA0A1W2PPF3 345 aa6.53□□□□□ -1.36
HDAC3-212ENST00000492407 A0A1W2PRE2 83 aa6.53□□□□□ -1.36
HDAC3-212ENST00000492407 AMTP48728 403 aa6.53□□□□□ -1.36
HDAC3-212ENST00000492407 FAM3BP58499 235 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-212ENST00000492407 SMAGPQ0VAQ4 97 aa6.53□□□□□ -1.36
HDAC3-212ENST00000492407 TMEM183BQ1AE95 376 aa6.53□□□□□ -1.36
HDAC3-212ENST00000492407 OR4C16Q8NGL9 310 aa6.53□□□□□ -1.36
HDAC3-212ENST00000492407 OR10G9Q8NGN4 311 aa6.53□□□□□ -1.36
HDAC3-212ENST00000492407 CIB3Q96Q77 187 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-212ENST00000492407 ZNF586Q9NXT0 402 aa6.53□□□□□ -1.36
HDAC3-212ENST00000492407 PRSS29PA6NIE9 313 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 ZFP92A6NM28 416 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 SOCS3O14543 225 aa6.52□□□□□ -1.37
HDAC3-212ENST00000492407 NUDT3O95989 172 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms