RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 SPATA3Q8NHX4 192 aa10.44□□□□□ -0.74
SMPD4-219ENST00000491128 RPP21Q9H633 154 aaKnown RBP10.44□□□□□ -0.74
SMPD4-219ENST00000491128 CLEC5AQ9NY25 188 aa10.44□□□□□ -0.74
SMPD4-219ENST00000491128 M0QZ24 198 aa10.43□□□□□ -0.74
SMPD4-219ENST00000491128 CT45A10P0DMU9 189 aa10.43□□□□□ -0.74
SMPD4-219ENST00000491128 DYNLRB2Q8TF09 96 aa10.43□□□□□ -0.74
SMPD4-219ENST00000491128 PGLYRP4Q96LB8 373 aa10.43□□□□□ -0.74
SMPD4-219ENST00000491128 PEMTQ9UBM1 199 aa10.43□□□□□ -0.74
SMPD4-219ENST00000491128 FHL3Q13643 280 aa10.43□□□□□ -0.74
SMPD4-219ENST00000491128 RBPMS2Q6ZRY4 209 aaKnown RBP10.43□□□□□ -0.74
SMPD4-219ENST00000491128 FAM231DQ6ZW35 169 aa10.43□□□□□ -0.74
SMPD4-219ENST00000491128 NUP35Q8NFH5 326 aa10.43□□□□□ -0.74
SMPD4-219ENST00000491128 PYGO2Q9BRQ0 406 aa10.43□□□□□ -0.74
SMPD4-219ENST00000491128 ZNF138P52744 262 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 OR8A1Q8NGG7 326 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 FRZBQ92765 325 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 SMIM27A0A1W2PRY6 76 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 GRIFINA4D1Z8 144 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 K7EQG2 157 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 OVOL1O14753 267 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 S100A2P29034 98 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 RAB4BP61018 213 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 OR10D4PQ8NGN7 298 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 OR10J6PQ8NGY7 276 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 ZNF492Q9P255 531 aa10.42□□□□□ -0.74
SMPD4-219ENST00000491128 TRBV6-1A0A0K0K1D8 114 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 SERTM2A0A1B0GWG4 89 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 CAMPP49913 170 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 SAPCD1Q5SSQ6 148 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 OR4B1Q8NGF8 309 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 SPRY2O43597 315 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 ORM1P02763 201 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 BMI1P35226 326 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 DEFB114Q30KQ6 69 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 FAM162BQ5T6X4 162 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 GFI1BQ5VTD9 330 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 TSKUQ8WUA8 353 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 SMIM12Q96EX1 92 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 C11orf21Q9P2W6 132 aa10.41□□□□□ -0.74
SMPD4-219ENST00000491128 KNCNA6PVL3 124 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 SAP30O75446 220 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 ID1P41134 155 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 C9orf47Q6ZRZ4 202 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 APRG1Q8IVJ8 170 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 NDFIP1Q9BT67 221 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 STAB1Q9NY15 2570 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 RBAKDNA6NC62 111 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 FXYD7P58549 80 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 DEFB131AP59861 70 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 KIAA1644Q3SXP7 199 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 BTF3L4Q96K17 158 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 SSBP4Q9BWG4 385 aaPredicted RBP10.4□□□□□ -0.74
SMPD4-219ENST00000491128 NAGKQ9UJ70 344 aa10.4□□□□□ -0.74
SMPD4-219ENST00000491128 TRAV12-2A0A075B6T6 113 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST1H2BKO60814 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST1H2BJP06899 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 TRGC1P0CF51 173 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST1H2BOP23527 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST1H2BBP33778 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 RNASE4P34096 147 aaKnown RBP10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST1H2BDP58876 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 SNRPD3P62318 126 aaKnown RBP10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST1H2BCP62807 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST2H2BEQ16778 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.39□□□□□ -0.75
SMPD4-219ENST00000491128 ZNF575Q86XF7 245 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST1H2BHQ93079 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 MRPL53Q96EL3 112 aaKnown RBP10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST1H2BNQ99877 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST1H2BMQ99879 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 SRD5A3Q9H8P0 318 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 NPIPB6E9PJ23 425 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 M0R2Z0 102 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 HIST3H2BBQ8N257 126 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 TRAPPC1Q9Y5R8 145 aa10.39□□□□□ -0.75
SMPD4-219ENST00000491128 TMEM189A5PLL7 270 aa10.38□□□□□ -0.75
SMPD4-219ENST00000491128 SNURFLB1AK76 121 aa10.38□□□□□ -0.75
SMPD4-219ENST00000491128 PDZD11Q5EBL8 140 aa10.38□□□□□ -0.75
SMPD4-219ENST00000491128 A8MWL6 223 aa10.38□□□□□ -0.75
SMPD4-219ENST00000491128 PHOX2AO14813 284 aa10.38□□□□□ -0.75
SMPD4-219ENST00000491128 PAFAH1B2P68402 229 aa10.38□□□□□ -0.75
SMPD4-219ENST00000491128 ACTL10Q5JWF8 245 aa10.38□□□□□ -0.75
SMPD4-219ENST00000491128 ARL6IP6Q8N6S5 226 aa10.38□□□□□ -0.75
SMPD4-219ENST00000491128 NAT8BQ9UHF3 227 aa10.38□□□□□ -0.75
SMPD4-219ENST00000491128 A0A1B0GUS0 222 aa10.37□□□□□ -0.75
SMPD4-219ENST00000491128 DDTP30046 118 aa10.37□□□□□ -0.75
SMPD4-219ENST00000491128 ZFAND2AQ8N6M9 145 aa10.37□□□□□ -0.75
SMPD4-219ENST00000491128 PRO1933Q9H354 126 aa10.37□□□□□ -0.75
SMPD4-219ENST00000491128 TIMM8BQ9Y5J9 83 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-219ENST00000491128 IGKV3D-20A0A0C4DH25 116 aa10.37□□□□□ -0.75
SMPD4-219ENST00000491128 FABP5P3A8MUU1 101 aa10.37□□□□□ -0.75
SMPD4-219ENST00000491128 PF4P02776 101 aa10.37□□□□□ -0.75
SMPD4-219ENST00000491128 GPX1P07203 203 aa10.37□□□□□ -0.75
SMPD4-219ENST00000491128 ARMS2P0C7Q2 107 aa10.37□□□□□ -0.75
SMPD4-219ENST00000491128 FOXA3P55318 350 aaPredicted RBP10.36□□□□□ -0.75
SMPD4-219ENST00000491128 PKIAP61925 76 aa10.36□□□□□ -0.75
SMPD4-219ENST00000491128 DNLZQ5SXM8 178 aa10.36□□□□□ -0.75
SMPD4-219ENST00000491128 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
SMPD4-219ENST00000491128 COL6A5A8TX70 2615 aa10.36□□□□□ -0.75
SMPD4-219ENST00000491128 A0A0J9YX75 114 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms