RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 OR5AK2Q8NH90 309 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 SPANXDQ9BXN6 97 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 DIDO1Q9BTC0 2240 aaKnown RBP1.88□□□□□ -2.11
PRPF4-203ENST00000488937 GLI3P10071 1580 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 CCDC180Q9P1Z9 1646 aa1.88□□□□□ -2.11
PRPF4-203ENST00000488937 CASZ1Q86V15 1759 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 NINQ8N4C6 2090 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 HMSDA8MTL9 139 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 M0R143 59 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 MGAMO43451 1857 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 HYPMO75409 117 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 RBP4P02753 201 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 MGST1P10620 155 aaKnown RBP1.87□□□□□ -2.11
PRPF4-203ENST00000488937 ETV6P41212 452 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 TPPP2P59282 170 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 HSD52Q0P140 79 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 SDK2Q58EX2 2172 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 NCMAPQ5T1S8 102 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 GKN2Q86XP6 184 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 KCNRGQ8N5I3 272 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 LINC00301Q8NCQ3 95 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 Q96M85 177 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 NAA60Q9H7X0 242 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 CCL26Q9Y258 94 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 CHCHD2Q9Y6H1 151 aaPredicted RBP1.87□□□□□ -2.11
PRPF4-203ENST00000488937 ADGRL1O94910 1474 aa1.87□□□□□ -2.11
PRPF4-203ENST00000488937 ANK1P16157 1881 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 PTPRFP10586 1907 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 IGKV3D-11A0A0A0MRZ8 115 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 TRAV1-1A0A0B4J248 108 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 M0R233 179 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 SNAPC5O75971 98 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 CRPP02741 224 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 CD2P06729 351 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 CKS2P33552 79 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 CATR1Q13166 79 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 CIRBPQ14011 172 aaKnown RBP1.86□□□□□ -2.11
PRPF4-203ENST00000488937 MIC13Q5XKP0 118 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 KRTAP26-1Q6PEX3 210 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 FAM19A2Q8N3H0 131 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 PLPP5Q8NEB5 264 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 ATP6V0E2Q8NHE4 81 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 SEC11CQ9BY50 192 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 NDUFB11Q9NX14 153 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 TAS2R8Q9NYW2 309 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 ADAMTS7Q9UKP4 1686 aa1.86□□□□□ -2.11
PRPF4-203ENST00000488937 PCNX2A6NKB5 2137 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 FREM3P0C091 2139 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 RP1P56715 2156 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 TROQ12816 1431 aaPredicted RBP1.85□□□□□ -2.11
PRPF4-203ENST00000488937 ZNF705FA8MVS1 300 aaPredicted RBP1.85□□□□□ -2.11
PRPF4-203ENST00000488937 KLF7O75840 302 aaPredicted RBP1.85□□□□□ -2.11
PRPF4-203ENST00000488937 UBL3O95164 117 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 SSR2P43308 183 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 ZNF846Q147U1 533 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 DEFB134Q4QY38 66 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 Q56UQ5 140 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 Q6ZS92 163 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 Q6ZTI0 123 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 FP248Q71RG6 208 aaPredicted RBP1.85□□□□□ -2.11
PRPF4-203ENST00000488937 ARPINQ7Z6K5 226 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 OR2T35Q8NGX2 323 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 COPS9Q8WXC6 57 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 LSM10Q969L4 123 aaKnown RBP1.85□□□□□ -2.11
PRPF4-203ENST00000488937 SNHG12Q9BXW3 62 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 SERP1Q9Y6X1 66 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 SPHKAPQ2M3C7 1700 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 SHANK1Q9Y566 2161 aa1.85□□□□□ -2.11
PRPF4-203ENST00000488937 MPDZO75970 2070 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 DOCK1Q14185 1865 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 ROBO1Q9Y6N7 1651 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 CEP192Q8TEP8 1941 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 TRAV12-1A0A0B4J245 112 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 ZNF736B4DX44 427 aaPredicted RBP1.84□□□□□ -2.11
PRPF4-203ENST00000488937 C5orf67F2Z3F1 127 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 GEMIN2O14893 280 aaKnown RBP1.84□□□□□ -2.11
PRPF4-203ENST00000488937 PROSCO94903 275 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 ASAH2BP0C7U1 165 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 DEFB113Q30KQ7 82 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 FOXI2Q6ZQN5 318 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 GTF2H5Q6ZYL4 71 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 RAB37Q96AX2 223 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 MUCL1Q96DR8 90 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 LINC00526Q96FQ7 95 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 CST11Q9H112 138 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 SHROOM3Q8TF72 1996 aa1.84□□□□□ -2.11
PRPF4-203ENST00000488937 LAMB1P07942 1786 aa1.84□□□□□ -2.12
PRPF4-203ENST00000488937 COL4A2P08572 1712 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 ADGRL2O95490 1459 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 ZFHX2Q9C0A1 2572 aaPredicted RBP1.83□□□□□ -2.12
PRPF4-203ENST00000488937 IGHV1-24A0A0C4DH33 117 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 MCRIP1C9JLW8 97 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 MPC2O95563 127 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 ERHP84090 104 aaKnown RBP1.83□□□□□ -2.12
PRPF4-203ENST00000488937 TPRXLQ17RH7 258 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 PYDC2Q56P42 97 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 Q6AWC8 147 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 VSTM2AQ8TAG5 236 aa1.83□□□□□ -2.12
PRPF4-203ENST00000488937 CMTM2Q8TAZ6 248 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms