RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 TMED6Q8WW62 240 aa12.04□□□□□ -0.48
HMG20B-212ENST00000487894 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
HMG20B-212ENST00000487894 FAM210BQ96KR6 192 aa12.04□□□□□ -0.48
HMG20B-212ENST00000487894 ARPC5LQ9BPX5 153 aa12.04□□□□□ -0.48
HMG20B-212ENST00000487894 TMEM167BQ9NRX6 74 aa12.04□□□□□ -0.48
HMG20B-212ENST00000487894 LENEPQ9Y5L5 61 aa12.04□□□□□ -0.48
HMG20B-212ENST00000487894 SNURFLB1AK76 121 aa12.03□□□□□ -0.48
HMG20B-212ENST00000487894 AKR1C8PQ5T2L2 129 aa12.03□□□□□ -0.48
HMG20B-212ENST00000487894 EIF4E3Q8N5X7 224 aaKnown RBP12.03□□□□□ -0.48
HMG20B-212ENST00000487894 LINC00612Q8N6U2 182 aa12.03□□□□□ -0.48
HMG20B-212ENST00000487894 C11orf72Q8NBR9 251 aa12.03□□□□□ -0.48
HMG20B-212ENST00000487894 GGTLC3B5MD39 225 aa12.02□□□□□ -0.49
HMG20B-212ENST00000487894 ANXA2RQ3ZCQ2 193 aa12.02□□□□□ -0.49
HMG20B-212ENST00000487894 TMEM88Q6PEY1 159 aa12.02□□□□□ -0.49
HMG20B-212ENST00000487894 C5orf17Q8NAS9 161 aa12.02□□□□□ -0.49
HMG20B-212ENST00000487894 ZNF680Q8NEM1 530 aa12.02□□□□□ -0.49
HMG20B-212ENST00000487894 NACAE9PAV3 2078 aa12.01□□□□□ -0.49
HMG20B-212ENST00000487894 DNAH10Q8IVF4 4471 aa12.01□□□□□ -0.49
HMG20B-212ENST00000487894 TRAV8-1A0A0A6YYK1 113 aa12.01□□□□□ -0.49
HMG20B-212ENST00000487894 CBY3A6NI87 242 aa12.01□□□□□ -0.49
HMG20B-212ENST00000487894 BCL2L11O43521 198 aa12.01□□□□□ -0.49
HMG20B-212ENST00000487894 ATP5G1P05496 136 aa12.01□□□□□ -0.49
HMG20B-212ENST00000487894 ATP5G3P48201 142 aa12.01□□□□□ -0.49
HMG20B-212ENST00000487894 DAZ2Q13117 558 aaKnown RBP12.01□□□□□ -0.49
HMG20B-212ENST00000487894 Q6AWC8 147 aa12.01□□□□□ -0.49
HMG20B-212ENST00000487894 IQCF2Q8IXL9 164 aa12.01□□□□□ -0.49
HMG20B-212ENST00000487894 FRAS1Q86XX4 4008 aa12□□□□□ -0.49
HMG20B-212ENST00000487894 IGHV1OR15-1A0A075B7D0 117 aa12□□□□□ -0.49
HMG20B-212ENST00000487894 A0A0D9SG52 128 aa12□□□□□ -0.49
HMG20B-212ENST00000487894 RGS13O14921 159 aa12□□□□□ -0.49
HMG20B-212ENST00000487894 TCRAP04437 139 aa12□□□□□ -0.49
HMG20B-212ENST00000487894 FGF8P55075 233 aaPredicted RBP12□□□□□ -0.49
HMG20B-212ENST00000487894 Q6ZNX1 250 aa12□□□□□ -0.49
HMG20B-212ENST00000487894 TVP23CQ96ET8 276 aa12□□□□□ -0.49
HMG20B-212ENST00000487894 TMPRSS5Q9H3S3 457 aa12□□□□□ -0.49
HMG20B-212ENST00000487894 GSN-AS1Q9NRJ2 163 aa12□□□□□ -0.49
HMG20B-212ENST00000487894 TP53TG3Q9ULZ0 132 aa12□□□□□ -0.49
HMG20B-212ENST00000487894 SERTM2A0A1B0GWG4 89 aa11.99□□□□□ -0.49
HMG20B-212ENST00000487894 A0A1W2PRE2 83 aa11.99□□□□□ -0.49
HMG20B-212ENST00000487894 GAGE12BA1L429 117 aa11.99□□□□□ -0.49
HMG20B-212ENST00000487894 F5H768 121 aa11.99□□□□□ -0.49
HMG20B-212ENST00000487894 GAGE7O76087 117 aa11.99□□□□□ -0.49
HMG20B-212ENST00000487894 GAGE12FP0CL80 117 aa11.99□□□□□ -0.49
HMG20B-212ENST00000487894 GAGE12GP0CL81 117 aa11.99□□□□□ -0.49
HMG20B-212ENST00000487894 GAGE12IP0CL82 117 aa11.99□□□□□ -0.49
HMG20B-212ENST00000487894 TCL1AP56279 114 aa11.99□□□□□ -0.49
HMG20B-212ENST00000487894 IBA57Q5T440 356 aaKnown RBP11.99□□□□□ -0.49
HMG20B-212ENST00000487894 KANTRA0A1W2PQU2 76 aa11.98□□□□□ -0.49
HMG20B-212ENST00000487894 MAP1LC3B2A6NCE7 125 aa11.98□□□□□ -0.49
HMG20B-212ENST00000487894 P0DMU3 169 aa11.98□□□□□ -0.49
HMG20B-212ENST00000487894 FAM231AP0DMU4 169 aa11.98□□□□□ -0.49
HMG20B-212ENST00000487894 FAM231CP0DMU5 169 aa11.98□□□□□ -0.49
HMG20B-212ENST00000487894 SUMO1P63165 101 aaKnown RBP11.98□□□□□ -0.49
HMG20B-212ENST00000487894 Q6ZTI0 123 aa11.98□□□□□ -0.49
HMG20B-212ENST00000487894 SGK494Q96LW2 274 aa11.98□□□□□ -0.49
HMG20B-212ENST00000487894 ZNF471Q9BX82 626 aaPredicted RBP11.98□□□□□ -0.49
HMG20B-212ENST00000487894 MAP1LC3BQ9GZQ8 125 aa11.98□□□□□ -0.49
HMG20B-212ENST00000487894 KLF12Q9Y4X4 402 aa11.98□□□□□ -0.49
HMG20B-212ENST00000487894 F6UZH7 168 aa11.97□□□□□ -0.49
HMG20B-212ENST00000487894 SEC11BP0C7V7 166 aa11.97□□□□□ -0.49
HMG20B-212ENST00000487894 FHITP49789 147 aa11.97□□□□□ -0.49
HMG20B-212ENST00000487894 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
HMG20B-212ENST00000487894 TCTE3Q8IZS6 198 aa11.97□□□□□ -0.49
HMG20B-212ENST00000487894 TREM1Q9NP99 234 aa11.97□□□□□ -0.49
HMG20B-212ENST00000487894 EPDR1Q9UM22 224 aa11.97□□□□□ -0.49
HMG20B-212ENST00000487894 MUC4Q99102 2169 aa11.96□□□□□ -0.49
HMG20B-212ENST00000487894 SPINK4O60575 86 aa11.96□□□□□ -0.49
HMG20B-212ENST00000487894 IGLV2-11P01706 119 aa11.96□□□□□ -0.49
HMG20B-212ENST00000487894 UBE2G2P60604 165 aa11.96□□□□□ -0.49
HMG20B-212ENST00000487894 TMUB2Q71RG4 321 aa11.96□□□□□ -0.49
HMG20B-212ENST00000487894 CYB561D1Q8N8Q1 229 aa11.96□□□□□ -0.49
HMG20B-212ENST00000487894 C15orf53Q8NAA6 179 aa11.96□□□□□ -0.49
HMG20B-212ENST00000487894 FAM74A7A6NL05 159 aa11.95□□□□□ -0.5
HMG20B-212ENST00000487894 K7EQM0 130 aa11.95□□□□□ -0.5
HMG20B-212ENST00000487894 ZNF415Q09FC8 603 aa11.95□□□□□ -0.5
HMG20B-212ENST00000487894 POM121L12Q8N7R1 296 aa11.95□□□□□ -0.5
HMG20B-212ENST00000487894 TMEM75Q8N9X5 138 aa11.95□□□□□ -0.5
HMG20B-212ENST00000487894 ATG101Q9BSB4 218 aa11.95□□□□□ -0.5
HMG20B-212ENST00000487894 PSG8Q9UQ74 426 aa11.95□□□□□ -0.5
HMG20B-212ENST00000487894 TRGV1A0A0A0MS02 117 aa11.94□□□□□ -0.5
HMG20B-212ENST00000487894 J3QL48 77 aa11.94□□□□□ -0.5
HMG20B-212ENST00000487894 PFDN1O60925 122 aa11.94□□□□□ -0.5
HMG20B-212ENST00000487894 HOXA5P20719 270 aa11.94□□□□□ -0.5
HMG20B-212ENST00000487894 FLI1Q01543 452 aaPredicted RBP11.94□□□□□ -0.5
HMG20B-212ENST00000487894 TDRG1Q3Y452 100 aa11.94□□□□□ -0.5
HMG20B-212ENST00000487894 FAM159AQ6UWV7 190 aa11.94□□□□□ -0.5
HMG20B-212ENST00000487894 C18orf15Q96N68 181 aa11.94□□□□□ -0.5
HMG20B-212ENST00000487894 C8orf49Q96NF6 230 aa11.94□□□□□ -0.5
HMG20B-212ENST00000487894 NDFIP1Q9BT67 221 aa11.94□□□□□ -0.5
HMG20B-212ENST00000487894 DNAH2Q9P225 4427 aa11.93□□□□□ -0.5
HMG20B-212ENST00000487894 TRAV21A0A0B4J279 112 aa11.93□□□□□ -0.5
HMG20B-212ENST00000487894 UMAD1C9J7I0 102 aa11.93□□□□□ -0.5
HMG20B-212ENST00000487894 TMEM183BQ1AE95 376 aa11.93□□□□□ -0.5
HMG20B-212ENST00000487894 TMEM183AQ8IXX5 376 aa11.93□□□□□ -0.5
HMG20B-212ENST00000487894 STOML3Q8TAV4 291 aa11.93□□□□□ -0.5
HMG20B-212ENST00000487894 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
HMG20B-212ENST00000487894 MRPL16Q9NX20 251 aaKnown RBP11.93□□□□□ -0.5
HMG20B-212ENST00000487894 MDFICQ9P1T7 246 aa11.93□□□□□ -0.5
HMG20B-212ENST00000487894 NAGKQ9UJ70 344 aa11.93□□□□□ -0.5
HMG20B-212ENST00000487894 TRGV11A0A075B6L2 103 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms