RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	NTN5	Q8WTR8	489 aa	Predicted RBP	5.66	□□□□□ -1.5
GARNL3-218	ENST00000487565	FMC1	Q96HJ9	113 aa		5.66	□□□□□ -1.5
GARNL3-218	ENST00000487565	NDFIP1	Q9BT67	221 aa		5.66	□□□□□ -1.5
GARNL3-218	ENST00000487565	SMDT1	Q9H4I9	107 aa		5.66	□□□□□ -1.5
GARNL3-218	ENST00000487565	SRD5A3	Q9H8P0	318 aa		5.66	□□□□□ -1.5
GARNL3-218	ENST00000487565	PPP1R14D	Q9NXH3	145 aa		5.66	□□□□□ -1.5
GARNL3-218	ENST00000487565	CMYA5	Q8N3K9	4069 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	TRAV8-1	A0A0A6YYK1	113 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	TRAV34	A0A0B4J273	112 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	NDUFS6	O75380	124 aa	Known RBP	5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	IGKV3-20	P01619	116 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	S100A9	P06702	114 aa	Known RBP	5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	SFTA3	P0C7M3	94 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	LEP	P41159	167 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	RPL35	P42766	123 aa	Known RBP	5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	ZNF138	P52744	262 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	FLI1	Q01543	452 aa	Predicted RBP	5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	ERCC8	Q13216	396 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	NDUFA5	Q16718	116 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	ZNF674	Q2M3X9	581 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	CENPW	Q5EE01	88 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	GDF5OS	Q5U4N7	250 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	DEFB125	Q8N687	156 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	OR4B1	Q8NGF8	309 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	VGLL1	Q99990	258 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	SMIM7	Q9BQ49	75 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	DERL1	Q9BUN8	251 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565	SLC35B3	Q9H1N7	401 aa		5.65	□□□□□ -1.5
GARNL3-218	ENST00000487565		H3BMM0	161 aa		5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	SRP19	P09132	144 aa	Known RBP	5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	TSPO	P30536	169 aa		5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	GNG4	P50150	75 aa		5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	TMEM183B	Q1AE95	376 aa		5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	C9orf47	Q6ZRZ4	202 aa		5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	PRNT	Q86SH4	94 aa		5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	TRPT1	Q86TN4	253 aa	Known RBP	5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	ODF3	Q96PU9	254 aa		5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	PARL	Q9H300	379 aa		5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	TUBA4B	Q9H853	241 aa		5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	PSG8	Q9UQ74	426 aa		5.64	□□□□□ -1.51
GARNL3-218	ENST00000487565	TRBV6-1	A0A0K0K1D8	114 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	RBMY1B	A6NDE4	496 aa	Known RBP	5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	RBMY1E	A6NEQ0	496 aa	Known RBP	5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565		A8MTW9	85 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565		C9JQL5	133 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	IGLV2-11	P01706	119 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	RBMY1D	P0C7P1	496 aa	Known RBP	5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	CT45A10	P0DMU9	189 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	RPL35A	P18077	110 aa	Known RBP	5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	TAS2R60	P59551	318 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	NUTF2	P61970	127 aa	Known RBP	5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	SOHLH1	Q5JUK2	328 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	EIF4E3	Q8N5X7	224 aa	Known RBP	5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	SGK494	Q96LW2	274 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	IGF2BP2-AS1	Q96M15	143 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	LINC00477	Q96M19	166 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	LINC00479	Q96M42	142 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	AGPAT4-IT1	Q9H0P7	198 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	ZNF492	Q9P255	531 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	KLF12	Q9Y4X4	402 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	LENEP	Q9Y5L5	61 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	DNAH3	Q8TD57	4116 aa		5.63	□□□□□ -1.51
GARNL3-218	ENST00000487565	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	TRBV7-9	A0A0J9YWB2	115 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	ZNF727	A8MUV8	499 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565		C9JCJ5	164 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565		J3KRW8	73 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565		M0R2Z0	102 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	CA1	P00915	261 aa	Predicted RBP	5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	INS	P01308	110 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	LTA	P01374	205 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	AMBP	P02760	352 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	PRB2	P02812	416 aa	Predicted RBP	5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	IGHV4-30-4	P0DP06	118 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	APOC4	P55056	127 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	SPINK13	Q1W4C9	94 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	FAM74A3	Q4VXF1	159 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	SAPCD1	Q5SSQ6	148 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	MORN3	Q6PF18	240 aa	Predicted RBP	5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	AMTN	Q6UX39	209 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	BAGE2	Q86Y30	109 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	NHLRC2	Q8NBF2	726 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	ASCL2	Q99929	193 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	ZFP30	Q9Y2G7	519 aa		5.62	□□□□□ -1.51
GARNL3-218	ENST00000487565	TRBV20OR9-2	A0A075B6H5	130 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	TMEM218	A2RU14	115 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565		F8W036	122 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	MGST1	P10620	155 aa	Known RBP	5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	CRISP2	P16562	243 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	CDKN1B	P46527	198 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	FXYD7	P58549	80 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	SMUG1	Q53HV7	270 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	ZFAND2A	Q8N6M9	145 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	SMIM12	Q96EX1	92 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	NIPSNAP3B	Q9BS92	247 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	C1QTNF4	Q9BXJ3	329 aa		5.61	□□□□□ -1.51
GARNL3-218	ENST00000487565	SORL1	Q92673	2214 aa		5.6	□□□□□ -1.51
GARNL3-218	ENST00000487565	MEGF8	Q7Z7M0	2845 aa		5.6	□□□□□ -1.51
GARNL3-218	ENST00000487565	KIR2DL5B	A0A0G2JN68	375 aa		5.6	□□□□□ -1.51
GARNL3-218	ENST00000487565	KIR2DL5B	A0A0G2JPC4	375 aa		5.6	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms