RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 MEF2BQ02080 365 aaPredicted RBP4.78□□□□□ -1.64
PTPRE-209ENST00000487428 DAZ2Q13117 558 aaKnown RBP4.78□□□□□ -1.64
PTPRE-209ENST00000487428 ERCC8Q13216 396 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 RBMY1FQ15415 496 aaKnown RBP4.78□□□□□ -1.64
PTPRE-209ENST00000487428 DNLZQ5SXM8 178 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 TEX261Q6UWH6 196 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 GOLT1AQ6ZVE7 132 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 LINC00612Q8N6U2 182 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 MUC7Q8TAX7 377 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 PTH2Q96A98 100 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 TVP23CQ96ET8 276 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 NIPSNAP3BQ9BS92 247 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 NDFIP1Q9BT67 221 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 NDUFAF3Q9BU61 184 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 SMDT1Q9H4I9 107 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 PSG8Q9UQ74 426 aa4.78□□□□□ -1.64
PTPRE-209ENST00000487428 TRAV21A0A0B4J279 112 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 A0A0J9YWU9 116 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 TMEM250H0YL14 139 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 PAGE4O60829 102 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 EIF3GO75821 320 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPRE-209ENST00000487428 IFNA7P01567 189 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 PFN1P07737 140 aaKnown RBP4.77□□□□□ -1.65
PTPRE-209ENST00000487428 BCL2P10415 239 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 NKX2-5P52952 324 aaPredicted RBP4.77□□□□□ -1.65
PTPRE-209ENST00000487428 LGALS9BQ3B8N2 356 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 PIK3CD-AS1Q5SR53 167 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 ALKAL2Q6UX46 152 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 TMEM183AQ8IXX5 376 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 EIF4E3Q8N5X7 224 aaKnown RBP4.77□□□□□ -1.65
PTPRE-209ENST00000487428 KCNS1Q96KK3 526 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 FAM210BQ96KR6 192 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 MLST8Q9BVC4 326 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 TREM1Q9NP99 234 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 DKK2Q9UBU2 259 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 VAX2Q9UIW0 290 aa4.77□□□□□ -1.65
PTPRE-209ENST00000487428 TENM2Q9NT68 2774 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 TRAV12-2A0A075B6T6 113 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 IGHV1OR15-1A0A075B7D0 117 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 TRAV8-1A0A0A6YYK1 113 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 LOC102723971A0A1B0GUV8 181 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 NUPR2A6NF83 97 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 CXCL1P09341 107 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 SPART-AS1P0CW21 52 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 TCL1AP56279 114 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 FXYD7P58549 80 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 GNG5P63218 68 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 CCL20P78556 96 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 KIR3DS1Q14943 382 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 SMUG1Q53HV7 270 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 PRR9Q5T870 116 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 CST9LP1Q5W188 147 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 Q86TA4 180 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 IQCF2Q8IXL9 164 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 C11orf72Q8NBR9 251 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 C11orf45Q8TAV5 145 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 LINC01587Q99440 93 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 SPXQ9BT56 116 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 TMEM208Q9BTX3 173 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 BOLA1Q9Y3E2 137 aa4.76□□□□□ -1.65
PTPRE-209ENST00000487428 TIMM8BQ9Y5J9 83 aaPredicted RBP4.76□□□□□ -1.65
PTPRE-209ENST00000487428 TRGV11A0A075B6L2 103 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 TRAV12-3A0A0B4J271 114 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 CXorf65A6NEN9 183 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 FABP5P3A8MUU1 101 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 C9JCJ5 164 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 CIDEAO60543 219 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 AKR1C3P42330 323 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 ATP5G3P48201 142 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 UBE2G2P60604 165 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 UBE2G1P62253 170 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 BTN1A1Q13410 526 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 ZNF674Q2M3X9 581 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 ZNF506Q5JVG8 444 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 CASC10Q5T4H9 136 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 Q8TAT8 98 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 GNG13Q9P2W3 67 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 LY96Q9Y6Y9 160 aa4.75□□□□□ -1.65
PTPRE-209ENST00000487428 DYNC2H1Q8NCM8 4307 aaKnown RBP4.74□□□□□ -1.65
PTPRE-209ENST00000487428 RBFOX3A6NFN3 312 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 CBY3A6NI87 242 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 H3BNG1 76 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 RGS13O14921 159 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 SPINK4O60575 86 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 MED14OSP0DP75 135 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 AZU1P20160 251 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 RNASE4P34096 147 aaKnown RBP4.74□□□□□ -1.65
PTPRE-209ENST00000487428 C12orf74Q32Q52 190 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 CEMP1Q6PRD7 247 aaPredicted RBP4.74□□□□□ -1.65
PTPRE-209ENST00000487428 FAM159AQ6UWV7 190 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 ZNF767PQ75MW2 155 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 RASL10AQ92737 203 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 BIN3Q9NQY0 253 aa4.74□□□□□ -1.65
PTPRE-209ENST00000487428 IGHV3OR16-12A0A075B7B8 117 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 TRAV10A0A0B4J240 114 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 SCO2A0A1W2PP80 73 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 ZNF705GA8MUZ8 300 aaPredicted RBP4.73□□□□□ -1.65
PTPRE-209ENST00000487428 SNURFLB1AK76 121 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 GCGP01275 180 aa4.73□□□□□ -1.65
PTPRE-209ENST00000487428 RPL35P42766 123 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms