RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 FAM90A27PA6NNH2 459 aa9.39□□□□□ -0.91
COL3A1-206ENST00000487010 GRNP28799 593 aaKnown RBP9.39□□□□□ -0.91
COL3A1-206ENST00000487010 C15orf32Q32M92 178 aa9.39□□□□□ -0.91
COL3A1-206ENST00000487010 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
COL3A1-206ENST00000487010 Q8N9W7 124 aa9.39□□□□□ -0.91
COL3A1-206ENST00000487010 FAM110DQ8TAY7 271 aaPredicted RBP9.39□□□□□ -0.91
COL3A1-206ENST00000487010 ZNF318Q5VUA4 2279 aa9.39□□□□□ -0.91
COL3A1-206ENST00000487010 IGHV3-66A0A0C4DH42 116 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 GOSR1O95249 250 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 CLEC3BP05452 202 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 MINOS1Q5TGZ0 78 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 C1orf122Q6ZSJ8 110 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 MINOS1-NBL1R4GNA1 71 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 A0A087WX48 190 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 TRAV26-2A0A0B4J265 109 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 CLPSL1A2RUU4 121 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 E9PLD3 99 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 RPL24P83731 157 aaKnown RBP9.38□□□□□ -0.91
COL3A1-206ENST00000487010 TAL2Q16559 108 aa9.38□□□□□ -0.91
COL3A1-206ENST00000487010 TPRP12270 2363 aaKnown RBP9.37□□□□□ -0.91
COL3A1-206ENST00000487010 IGHV4-4A0A075B6R2 117 aa9.37□□□□□ -0.91
COL3A1-206ENST00000487010 TRAV8-2A0A0B4J237 113 aa9.37□□□□□ -0.91
COL3A1-206ENST00000487010 TEX48A0A1B0GUV7 120 aa9.37□□□□□ -0.91
COL3A1-206ENST00000487010 TCF15Q12870 199 aa9.37□□□□□ -0.91
COL3A1-206ENST00000487010 KLK9Q2XQG4 91 aa9.37□□□□□ -0.91
COL3A1-206ENST00000487010 TMEM78Q5T7P6 136 aa9.37□□□□□ -0.91
COL3A1-206ENST00000487010 KLK9Q9UKQ9 250 aa9.37□□□□□ -0.91
COL3A1-206ENST00000487010 MAP1BP46821 2468 aaKnown RBP9.37□□□□□ -0.91
COL3A1-206ENST00000487010 IGLL5B9A064 214 aa9.36□□□□□ -0.91
COL3A1-206ENST00000487010 FBXL19-AS1Q494R0 122 aa9.36□□□□□ -0.91
COL3A1-206ENST00000487010 UFC1Q9Y3C8 167 aa9.36□□□□□ -0.91
COL3A1-206ENST00000487010 ATMQ13315 3056 aa9.36□□□□□ -0.91
COL3A1-206ENST00000487010 ANKRD11Q6UB99 2663 aaPredicted RBP9.36□□□□□ -0.91
COL3A1-206ENST00000487010 K7EMI3 77 aa9.36□□□□□ -0.91
COL3A1-206ENST00000487010 PLNP26678 52 aa9.36□□□□□ -0.91
COL3A1-206ENST00000487010 ECSCRQ19T08 205 aa9.36□□□□□ -0.91
COL3A1-206ENST00000487010 MRPL53Q96EL3 112 aaKnown RBP9.36□□□□□ -0.91
COL3A1-206ENST00000487010 HIF1ANQ9NWT6 349 aa9.36□□□□□ -0.91
COL3A1-206ENST00000487010 ACACAQ13085 2346 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 IGHV3OR16-13A0A075B7E8 117 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 IGHV3-74A0A0B4J1X5 117 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 C12orf74Q32Q52 190 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 SPANXN1Q5VSR9 72 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 CLEC19AQ6UXS0 136 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 FOXI2Q6ZQN5 318 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 C9orf47Q6ZRZ4 202 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 CCDC140Q96MF4 163 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 ATP6V0E1O15342 81 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 EFNA4P52798 201 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 Q6ZQT7 251 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
COL3A1-206ENST00000487010 TACC2O95359 2948 aa9.34□□□□□ -0.91
COL3A1-206ENST00000487010 TRAV12-1A0A0B4J245 112 aa9.34□□□□□ -0.91
COL3A1-206ENST00000487010 F8W1H4 67 aa9.34□□□□□ -0.91
COL3A1-206ENST00000487010 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.34□□□□□ -0.91
COL3A1-206ENST00000487010 ZFP36P26651 326 aaKnown RBP9.34□□□□□ -0.91
COL3A1-206ENST00000487010 C11orf71Q6IPW1 123 aa9.34□□□□□ -0.91
COL3A1-206ENST00000487010 MRAP2Q96G30 205 aa9.34□□□□□ -0.91
COL3A1-206ENST00000487010 ZNF479Q96JC4 524 aa9.34□□□□□ -0.91
COL3A1-206ENST00000487010 ZNF292O60281 2723 aa9.34□□□□□ -0.92
COL3A1-206ENST00000487010 IGHV3-49A0A0A0MS15 119 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 H7C1H1 209 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 METTL26Q96S19 204 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 HIST1H4GQ99525 98 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 SIRPDQ9H106 197 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 CSMD1Q96PZ7 3565 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 F8VRH5 84 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 ZNF207O43670 478 aaKnown RBP9.33□□□□□ -0.92
COL3A1-206ENST00000487010 WFDC2Q14508 124 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 EEF1AKMT3Q96AZ1 226 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 SMIM2Q9BVW6 85 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 SPANXB1Q9NS25 103 aaPredicted RBP9.33□□□□□ -0.92
COL3A1-206ENST00000487010 U3KQE9 123 aa9.33□□□□□ -0.92
COL3A1-206ENST00000487010 TRBV7-3A0A075B6L6 115 aa9.32□□□□□ -0.92
COL3A1-206ENST00000487010 LINC01619G3V211 115 aa9.32□□□□□ -0.92
COL3A1-206ENST00000487010 H3BVH4 76 aa9.32□□□□□ -0.92
COL3A1-206ENST00000487010 AJUBAQ96IF1 538 aa9.32□□□□□ -0.92
COL3A1-206ENST00000487010 TTC28Q96AY4 2481 aa9.32□□□□□ -0.92
COL3A1-206ENST00000487010 AGRNO00468 2067 aa9.32□□□□□ -0.92
COL3A1-206ENST00000487010 TRBV7-1A0A0A6YYK4 115 aa9.32□□□□□ -0.92
COL3A1-206ENST00000487010 G3V318 75 aa9.32□□□□□ -0.92
COL3A1-206ENST00000487010 K7ENP7 123 aa9.32□□□□□ -0.92
COL3A1-206ENST00000487010 SAMD13Q5VXD3 122 aa9.32□□□□□ -0.92
COL3A1-206ENST00000487010 PIEZO2Q9H5I5 2752 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 MYMXA0A1B0GTQ4 84 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 A0A1B0GWB2 263 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 LINC01548A6NM66 108 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 H3BMG7 143 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 CCL21O00585 134 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 CDSNQ15517 529 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 ORMDL2Q53FV1 153 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 PRR9Q5T870 116 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 TOMM6Q96B49 74 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 SCGB3A1Q96QR1 104 aa9.31□□□□□ -0.92
COL3A1-206ENST00000487010 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
COL3A1-206ENST00000487010 SLC25A16P16260 332 aa9.3□□□□□ -0.92
COL3A1-206ENST00000487010 RRN3P1Q2M238 152 aa9.3□□□□□ -0.92
COL3A1-206ENST00000487010 C16orf92Q96LL3 132 aa9.3□□□□□ -0.92
COL3A1-206ENST00000487010 OR11H12B2RN74 326 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms