RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ANXA2RQ3ZCQ2 193 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 Q6ZTI0 123 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 IQCF2Q8IXL9 164 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 LINC00612Q8N6U2 182 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 GNPNAT1Q96EK6 184 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-208ENST00000486404 SH3BGRL3Q9H299 93 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 TMPRSS5Q9H3S3 457 aa9.06□□□□□ -0.96
CHMP3-208ENST00000486404 TRAV26-1A0A087WT03 109 aa9.05□□□□□ -0.96
CHMP3-208ENST00000486404 PGPA6NDG6 321 aa9.05□□□□□ -0.96
CHMP3-208ENST00000486404 ZNF324O75467 553 aaPredicted RBP9.05□□□□□ -0.96
CHMP3-208ENST00000486404 TCL1AP56279 114 aa9.05□□□□□ -0.96
CHMP3-208ENST00000486404 FAM3BP58499 235 aaPredicted RBP9.05□□□□□ -0.96
CHMP3-208ENST00000486404 SERF2P84101 59 aa9.05□□□□□ -0.96
CHMP3-208ENST00000486404 Q5BKY6 102 aa9.05□□□□□ -0.96
CHMP3-208ENST00000486404 IBA57Q5T440 356 aaKnown RBP9.05□□□□□ -0.96
CHMP3-208ENST00000486404 GOLT1AQ6ZVE7 132 aa9.05□□□□□ -0.96
CHMP3-208ENST00000486404 C11orf72Q8NBR9 251 aa9.05□□□□□ -0.96
CHMP3-208ENST00000486404 TNFSF18Q9UNG2 199 aa9.05□□□□□ -0.96
CHMP3-208ENST00000486404 LENEPQ9Y5L5 61 aa9.05□□□□□ -0.96
CHMP3-208ENST00000486404 A0A0J9YY99 117 aa9.04□□□□□ -0.96
CHMP3-208ENST00000486404 RNF222A6NCQ9 220 aa9.04□□□□□ -0.96
CHMP3-208ENST00000486404 CCL18P55774 89 aa9.04□□□□□ -0.96
CHMP3-208ENST00000486404 MUC21Q5SSG8 566 aa9.04□□□□□ -0.96
CHMP3-208ENST00000486404 RPL7L1Q6DKI1 246 aaKnown RBP9.04□□□□□ -0.96
CHMP3-208ENST00000486404 LINC00528Q8N1L1 170 aa9.04□□□□□ -0.96
CHMP3-208ENST00000486404 TMED6Q8WW62 240 aa9.04□□□□□ -0.96
CHMP3-208ENST00000486404 RAB24Q969Q5 203 aa9.04□□□□□ -0.96
CHMP3-208ENST00000486404 NDFIP1Q9BT67 221 aa9.04□□□□□ -0.96
CHMP3-208ENST00000486404 ACTR3CQ9C0K3 210 aaPredicted RBP9.04□□□□□ -0.96
CHMP3-208ENST00000486404 NAGKQ9UJ70 344 aa9.04□□□□□ -0.96
CHMP3-208ENST00000486404 FRAS1Q86XX4 4008 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 K7EQM0 130 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 ARPC5O15511 151 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 CXorf1O96002 111 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 STAG3L2P0CL84 134 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 STAG3L3P0CL85 134 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 GCHFRP30047 84 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 GNG5P63218 68 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 LGALS9BQ3B8N2 356 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 SOHLH1Q5JUK2 328 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 FAM159AQ6UWV7 190 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 LINC00336Q6ZUF6 198 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 TMEM167BQ9NRX6 74 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 MRPL16Q9NX20 251 aaKnown RBP9.03□□□□□ -0.96
CHMP3-208ENST00000486404 TP53TG3Q9ULZ0 132 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 KLF12Q9Y4X4 402 aa9.03□□□□□ -0.96
CHMP3-208ENST00000486404 TRGV11A0A075B6L2 103 aa9.02□□□□□ -0.97
CHMP3-208ENST00000486404 SERTM2A0A1B0GWG4 89 aa9.02□□□□□ -0.97
CHMP3-208ENST00000486404 F6UZH7 168 aa9.02□□□□□ -0.97
CHMP3-208ENST00000486404 HOXA5P20719 270 aa9.02□□□□□ -0.97
CHMP3-208ENST00000486404 Q6AWC8 147 aa9.02□□□□□ -0.97
CHMP3-208ENST00000486404 ARL6IP6Q8N6S5 226 aa9.02□□□□□ -0.97
CHMP3-208ENST00000486404 C5orf17Q8NAS9 161 aa9.02□□□□□ -0.97
CHMP3-208ENST00000486404 ST6GAL2Q96JF0 529 aa9.02□□□□□ -0.97
CHMP3-208ENST00000486404 MUC4Q99102 2169 aa9.02□□□□□ -0.97
CHMP3-208ENST00000486404 TRAV8-1A0A0A6YYK1 113 aa9.01□□□□□ -0.97
CHMP3-208ENST00000486404 SPINK4O60575 86 aa9.01□□□□□ -0.97
CHMP3-208ENST00000486404 TMEM183BQ1AE95 376 aa9.01□□□□□ -0.97
CHMP3-208ENST00000486404 ZFP69Q49AA0 526 aa9.01□□□□□ -0.97
CHMP3-208ENST00000486404 AKR1C8PQ5T2L2 129 aa9.01□□□□□ -0.97
CHMP3-208ENST00000486404 Q6ZQT7 251 aa9.01□□□□□ -0.97
CHMP3-208ENST00000486404 TMEM183AQ8IXX5 376 aa9.01□□□□□ -0.97
CHMP3-208ENST00000486404 TREM1Q9NP99 234 aa9.01□□□□□ -0.97
CHMP3-208ENST00000486404 TRAV21A0A0B4J279 112 aa9□□□□□ -0.97
CHMP3-208ENST00000486404 CTXND1A0A1B0GTU2 59 aa9□□□□□ -0.97
CHMP3-208ENST00000486404 TAAR5O14804 337 aa9□□□□□ -0.97
CHMP3-208ENST00000486404 IGHV3-53P01767 116 aa9□□□□□ -0.97
CHMP3-208ENST00000486404 C18orf15Q96N68 181 aa9□□□□□ -0.97
CHMP3-208ENST00000486404 PRSS29PA6NIE9 313 aa8.99□□□□□ -0.97
CHMP3-208ENST00000486404 H3BNG1 76 aa8.99□□□□□ -0.97
CHMP3-208ENST00000486404 TCRAP04437 139 aa8.99□□□□□ -0.97
CHMP3-208ENST00000486404 Q6ZR54 194 aa8.99□□□□□ -0.97
CHMP3-208ENST00000486404 SSX7Q7RTT5 188 aa8.99□□□□□ -0.97
CHMP3-208ENST00000486404 SDF2L1Q9HCN8 221 aa8.99□□□□□ -0.97
CHMP3-208ENST00000486404 LINC00588Q9Y4M8 146 aa8.99□□□□□ -0.97
CHMP3-208ENST00000486404 GGTLC3B5MD39 225 aa8.98□□□□□ -0.97
CHMP3-208ENST00000486404 G3V3Q6 166 aa8.98□□□□□ -0.97
CHMP3-208ENST00000486404 SMLR1H3BR10 107 aa8.98□□□□□ -0.97
CHMP3-208ENST00000486404 C1orf134Q5TEV5 83 aa8.98□□□□□ -0.97
CHMP3-208ENST00000486404 CYB561D1Q8N8Q1 229 aa8.98□□□□□ -0.97
CHMP3-208ENST00000486404 SGK494Q96LW2 274 aa8.98□□□□□ -0.97
CHMP3-208ENST00000486404 SPXQ9BT56 116 aa8.98□□□□□ -0.97
CHMP3-208ENST00000486404 DNAH10Q8IVF4 4471 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 TRGV4A0A0C4DH28 118 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 NBDYA0A0U1RRE5 68 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 A6NJY4 79 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 PAX4O43316 350 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 IFNA7P01567 189 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 UBE2G2P60604 165 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 SUMO1P63165 101 aaKnown RBP8.97□□□□□ -0.97
CHMP3-208ENST00000486404 FLI1Q01543 452 aaPredicted RBP8.97□□□□□ -0.97
CHMP3-208ENST00000486404 PRNTQ86SH4 94 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 ZNRF2Q8NHG8 242 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 SUN5Q8TC36 379 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 KCNS1Q96KK3 526 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 MDFICQ9P1T7 246 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 PSG8Q9UQ74 426 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 ICOSQ9Y6W8 199 aa8.97□□□□□ -0.97
CHMP3-208ENST00000486404 A0A1W2PRE2 83 aa8.96□□□□□ -0.98
CHMP3-208ENST00000486404 MAP1LC3B2A6NCE7 125 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms