RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 PKHD1P08F94 4074 aa9.21□□□□□ -0.93
SSR4-211ENST00000486204 TMEM189A5PLL7 270 aa9.21□□□□□ -0.94
SSR4-211ENST00000486204 H7BYZ3 331 aa9.21□□□□□ -0.94
SSR4-211ENST00000486204 ZNF324O75467 553 aaPredicted RBP9.21□□□□□ -0.94
SSR4-211ENST00000486204 IGLV2-11P01706 119 aa9.21□□□□□ -0.94
SSR4-211ENST00000486204 SULT1A2P50226 295 aa9.21□□□□□ -0.94
SSR4-211ENST00000486204 TAS2R60P59551 318 aa9.21□□□□□ -0.94
SSR4-211ENST00000486204 Q6ZQT7 251 aa9.21□□□□□ -0.94
SSR4-211ENST00000486204 RNASE8Q8TDE3 154 aaKnown RBP9.21□□□□□ -0.94
SSR4-211ENST00000486204 TVP23CQ96ET8 276 aa9.21□□□□□ -0.94
SSR4-211ENST00000486204 LINC01587Q99440 93 aa9.21□□□□□ -0.94
SSR4-211ENST00000486204 EPDR1Q9UM22 224 aa9.21□□□□□ -0.94
SSR4-211ENST00000486204 SERTM2A0A1B0GWG4 89 aa9.2□□□□□ -0.94
SSR4-211ENST00000486204 GPX1P07203 203 aa9.2□□□□□ -0.94
SSR4-211ENST00000486204 EMP1P54849 157 aa9.2□□□□□ -0.94
SSR4-211ENST00000486204 C12orf74Q32Q52 190 aa9.2□□□□□ -0.94
SSR4-211ENST00000486204 EIF5AL1Q6IS14 154 aaKnown RBP9.2□□□□□ -0.94
SSR4-211ENST00000486204 CCDC28AQ8IWP9 274 aa9.2□□□□□ -0.94
SSR4-211ENST00000486204 SFT2D1Q8WV19 159 aa9.2□□□□□ -0.94
SSR4-211ENST00000486204 ATG101Q9BSB4 218 aa9.2□□□□□ -0.94
SSR4-211ENST00000486204 DKK2Q9UBU2 259 aa9.2□□□□□ -0.94
SSR4-211ENST00000486204 ARL2-SNX15V9GYD0 113 aa9.2□□□□□ -0.94
SSR4-211ENST00000486204 DNAH6Q9C0G6 4158 aa9.2□□□□□ -0.94
SSR4-211ENST00000486204 FAT2Q9NYQ8 4349 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 A0A1B0GV50 99 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 H2AFB1P0C5Y9 115 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 RNASE4P34096 147 aaKnown RBP9.19□□□□□ -0.94
SSR4-211ENST00000486204 RAB5CP51148 216 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 FAM222AQ5U5X8 452 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 Q6ZTC4 211 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 ZNF767PQ75MW2 155 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 CYB561D1Q8N8Q1 229 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 TMEM75Q8N9X5 138 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 TMEM263Q8WUH6 116 aaKnown RBP9.19□□□□□ -0.94
SSR4-211ENST00000486204 PHLDA1Q8WV24 401 aaPredicted RBP9.19□□□□□ -0.94
SSR4-211ENST00000486204 SGK494Q96LW2 274 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 PYGO2Q9BRQ0 406 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 LINC00467Q9BRT7 94 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 NIPSNAP3BQ9BS92 247 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 BOLA1Q9Y3E2 137 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 NACAE9PAV3 2078 aa9.19□□□□□ -0.94
SSR4-211ENST00000486204 TRAV1-1A0A0B4J248 108 aa9.18□□□□□ -0.94
SSR4-211ENST00000486204 ATP5G3P48201 142 aa9.18□□□□□ -0.94
SSR4-211ENST00000486204 Q6AWC8 147 aa9.18□□□□□ -0.94
SSR4-211ENST00000486204 C16orf74Q96GX8 76 aa9.18□□□□□ -0.94
SSR4-211ENST00000486204 NKX6-2Q9C056 277 aaPredicted RBP9.18□□□□□ -0.94
SSR4-211ENST00000486204 DNAH2Q9P225 4427 aa9.18□□□□□ -0.94
SSR4-211ENST00000486204 MUC4Q99102 2169 aa9.17□□□□□ -0.94
SSR4-211ENST00000486204 PEX7O00628 323 aa9.17□□□□□ -0.94
SSR4-211ENST00000486204 PAGE4O60829 102 aa9.17□□□□□ -0.94
SSR4-211ENST00000486204 SPART-AS1P0CW21 52 aa9.17□□□□□ -0.94
SSR4-211ENST00000486204 HTN1P15515 57 aa9.17□□□□□ -0.94
SSR4-211ENST00000486204 CCL20P78556 96 aa9.17□□□□□ -0.94
SSR4-211ENST00000486204 FLI1Q01543 452 aaPredicted RBP9.17□□□□□ -0.94
SSR4-211ENST00000486204 ZNF493Q6ZR52 646 aa9.17□□□□□ -0.94
SSR4-211ENST00000486204 C11orf72Q8NBR9 251 aa9.17□□□□□ -0.94
SSR4-211ENST00000486204 LINC00479Q96M42 142 aa9.17□□□□□ -0.94
SSR4-211ENST00000486204 PSG8Q9UQ74 426 aa9.17□□□□□ -0.94
SSR4-211ENST00000486204 TEX48A0A1B0GUV7 120 aa9.16□□□□□ -0.94
SSR4-211ENST00000486204 F6UZH7 168 aa9.16□□□□□ -0.94
SSR4-211ENST00000486204 K7EQM0 130 aa9.16□□□□□ -0.94
SSR4-211ENST00000486204 IFNA7P01567 189 aa9.16□□□□□ -0.94
SSR4-211ENST00000486204 ANXA2RQ3ZCQ2 193 aa9.16□□□□□ -0.94
SSR4-211ENST00000486204 ALKAL2Q6UX46 152 aa9.16□□□□□ -0.94
SSR4-211ENST00000486204 EIF4E3Q8N5X7 224 aaKnown RBP9.16□□□□□ -0.94
SSR4-211ENST00000486204 HIST1H2BAQ96A08 127 aa9.16□□□□□ -0.94
SSR4-211ENST00000486204 C8orf49Q96NF6 230 aa9.16□□□□□ -0.94
SSR4-211ENST00000486204 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
SSR4-211ENST00000486204 DNAH11Q96DT5 4516 aa9.16□□□□□ -0.94
SSR4-211ENST00000486204 IGHV1OR15-1A0A075B7D0 117 aa9.15□□□□□ -0.94
SSR4-211ENST00000486204 TRAV34A0A0B4J273 112 aa9.15□□□□□ -0.94
SSR4-211ENST00000486204 FBLL1A6NHQ2 334 aaKnown RBP9.15□□□□□ -0.94
SSR4-211ENST00000486204 LYRM9A8MSI8 78 aa9.15□□□□□ -0.94
SSR4-211ENST00000486204 C11orf94C9JXX5 98 aa9.15□□□□□ -0.94
SSR4-211ENST00000486204 ZNF80P51504 273 aaPredicted RBP9.15□□□□□ -0.94
SSR4-211ENST00000486204 CST9LP1Q5W188 147 aa9.15□□□□□ -0.94
SSR4-211ENST00000486204 Q86TA4 180 aa9.15□□□□□ -0.94
SSR4-211ENST00000486204 TCEAL7Q9BRU2 100 aa9.15□□□□□ -0.94
SSR4-211ENST00000486204 TP53TG3Q9ULZ0 132 aa9.15□□□□□ -0.94
SSR4-211ENST00000486204 TRAV10A0A0B4J240 114 aa9.14□□□□□ -0.95
SSR4-211ENST00000486204 A0A1B0GVY2 172 aa9.14□□□□□ -0.95
SSR4-211ENST00000486204 PPT1P50897 306 aa9.14□□□□□ -0.95
SSR4-211ENST00000486204 LINC00336Q6ZUF6 198 aa9.14□□□□□ -0.95
SSR4-211ENST00000486204 PRNTQ86SH4 94 aa9.14□□□□□ -0.95
SSR4-211ENST00000486204 LINC00612Q8N6U2 182 aa9.14□□□□□ -0.95
SSR4-211ENST00000486204 KLF12Q9Y4X4 402 aa9.14□□□□□ -0.95
SSR4-211ENST00000486204 TIMM8BQ9Y5J9 83 aaPredicted RBP9.14□□□□□ -0.95
SSR4-211ENST00000486204 DNAH17Q9UFH2 4485 aa9.13□□□□□ -0.95
SSR4-211ENST00000486204 TRBV6-1A0A0K0K1D8 114 aa9.13□□□□□ -0.95
SSR4-211ENST00000486204 CBY3A6NI87 242 aa9.13□□□□□ -0.95
SSR4-211ENST00000486204 RGS13O14921 159 aa9.13□□□□□ -0.95
SSR4-211ENST00000486204 TDRG1Q3Y452 100 aa9.13□□□□□ -0.95
SSR4-211ENST00000486204 MUC21Q5SSG8 566 aa9.13□□□□□ -0.95
SSR4-211ENST00000486204 IBA57Q5T440 356 aaKnown RBP9.13□□□□□ -0.95
SSR4-211ENST00000486204 ZNF680Q8NEM1 530 aa9.13□□□□□ -0.95
SSR4-211ENST00000486204 C2CD4CQ8TF44 421 aa9.13□□□□□ -0.95
SSR4-211ENST00000486204 NDFIP1Q9BT67 221 aa9.13□□□□□ -0.95
SSR4-211ENST00000486204 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
SSR4-211ENST00000486204 MANBALQ9NQG1 85 aa9.13□□□□□ -0.95
SSR4-211ENST00000486204 GNG13Q9P2W3 67 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms