RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 TMED6Q8WW62 240 aa13.57□□□□□ -0.24
SNX17-206ENST00000484886 MAP1LC3BQ9GZQ8 125 aa13.57□□□□□ -0.24
SNX17-206ENST00000484886 TMPRSS5Q9H3S3 457 aa13.57□□□□□ -0.24
SNX17-206ENST00000484886 LENEPQ9Y5L5 61 aa13.57□□□□□ -0.24
SNX17-206ENST00000484886 IGHV1OR15-1A0A075B7D0 117 aa13.56□□□□□ -0.24
SNX17-206ENST00000484886 TRAV8-1A0A0A6YYK1 113 aa13.56□□□□□ -0.24
SNX17-206ENST00000484886 F5H768 121 aa13.56□□□□□ -0.24
SNX17-206ENST00000484886 UBE2G2P60604 165 aa13.56□□□□□ -0.24
SNX17-206ENST00000484886 EIF5AP63241 154 aaKnown RBP13.56□□□□□ -0.24
SNX17-206ENST00000484886 Q6ZQT7 251 aa13.56□□□□□ -0.24
SNX17-206ENST00000484886 SERTM2A0A1B0GWG4 89 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 GGTLC3B5MD39 225 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 TCRAP04437 139 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 ATP5G1P05496 136 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 ATP5G3P48201 142 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 MUC21Q5SSG8 566 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 FAM210BQ96KR6 192 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 SGK494Q96LW2 274 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 LINC00467Q9BRT7 94 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 NDFIP1Q9BT67 221 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 TREM1Q9NP99 234 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 GSN-AS1Q9NRJ2 163 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 DNAH1Q9P2D7 4330 aa13.55□□□□□ -0.24
SNX17-206ENST00000484886 A0A1W2PRE2 83 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 GAGE12BA1L429 117 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 GAGE7O76087 117 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 IFNA7P01567 189 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 SEC11BP0C7V7 166 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 GAGE12FP0CL80 117 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 GAGE12GP0CL81 117 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 GAGE12IP0CL82 117 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 ANXA2RQ3ZCQ2 193 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 TMEM88Q6PEY1 159 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 TCTE3Q8IZS6 198 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 STOML3Q8TAV4 291 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 NAGKQ9UJ70 344 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 EPDR1Q9UM22 224 aa13.54□□□□□ -0.24
SNX17-206ENST00000484886 F6UZH7 168 aa13.53□□□□□ -0.24
SNX17-206ENST00000484886 FHITP49789 147 aa13.53□□□□□ -0.24
SNX17-206ENST00000484886 FAM213BQ8TBF2 198 aa13.53□□□□□ -0.24
SNX17-206ENST00000484886 TP53TG3Q9ULZ0 132 aa13.53□□□□□ -0.24
SNX17-206ENST00000484886 UMAD1C9J7I0 102 aa13.52□□□□□ -0.25
SNX17-206ENST00000484886 TPT1P13693 172 aaKnown RBP13.52□□□□□ -0.25
SNX17-206ENST00000484886 Q6AWC8 147 aa13.52□□□□□ -0.25
SNX17-206ENST00000484886 AKAP14Q86UN6 197 aa13.52□□□□□ -0.25
SNX17-206ENST00000484886 CYB561D1Q8N8Q1 229 aa13.52□□□□□ -0.25
SNX17-206ENST00000484886 ATG101Q9BSB4 218 aa13.52□□□□□ -0.25
SNX17-206ENST00000484886 TRGV1A0A0A0MS02 117 aa13.51□□□□□ -0.25
SNX17-206ENST00000484886 DAZ2Q13117 558 aaKnown RBP13.51□□□□□ -0.25
SNX17-206ENST00000484886 FAM159AQ6UWV7 190 aa13.51□□□□□ -0.25
SNX17-206ENST00000484886 Q6ZTI0 123 aa13.51□□□□□ -0.25
SNX17-206ENST00000484886 PRNTQ86SH4 94 aa13.51□□□□□ -0.25
SNX17-206ENST00000484886 C11orf72Q8NBR9 251 aa13.51□□□□□ -0.25
SNX17-206ENST00000484886 PSG8Q9UQ74 426 aa13.51□□□□□ -0.25
SNX17-206ENST00000484886 KLF12Q9Y4X4 402 aa13.51□□□□□ -0.25
SNX17-206ENST00000484886 TRGV2A0A075B6R0 118 aa13.5□□□□□ -0.25
SNX17-206ENST00000484886 A0A1B0GV50 99 aa13.5□□□□□ -0.25
SNX17-206ENST00000484886 P0DMU3 169 aa13.5□□□□□ -0.25
SNX17-206ENST00000484886 FAM231AP0DMU4 169 aa13.5□□□□□ -0.25
SNX17-206ENST00000484886 FAM231CP0DMU5 169 aa13.5□□□□□ -0.25
SNX17-206ENST00000484886 TCL1AP56279 114 aa13.5□□□□□ -0.25
SNX17-206ENST00000484886 FLI1Q01543 452 aaPredicted RBP13.5□□□□□ -0.25
SNX17-206ENST00000484886 ZNF415Q09FC8 603 aa13.5□□□□□ -0.25
SNX17-206ENST00000484886 IBA57Q5T440 356 aaKnown RBP13.5□□□□□ -0.25
SNX17-206ENST00000484886 UBE2DNLQ8IWF7 75 aa13.5□□□□□ -0.25
SNX17-206ENST00000484886 SFT2D1Q8WV19 159 aa13.5□□□□□ -0.25
SNX17-206ENST00000484886 TVP23CQ96ET8 276 aa13.5□□□□□ -0.25
SNX17-206ENST00000484886 NKX6-2Q9C056 277 aaPredicted RBP13.5□□□□□ -0.25
SNX17-206ENST00000484886 HYDINQ4G0P3 5121 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 TRAV21A0A0B4J279 112 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 FAM74A7A6NL05 159 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 C1QBP02746 253 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 PPT1P50897 306 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 OR5I1Q13606 314 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 TMEM183BQ1AE95 376 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 ZFP69Q49AA0 526 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 CST9LP1Q5W188 147 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 TMEM183AQ8IXX5 376 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 LINC00612Q8N6U2 182 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 TMEM75Q8N9X5 138 aa13.49□□□□□ -0.25
SNX17-206ENST00000484886 TRGV11A0A075B6L2 103 aa13.48□□□□□ -0.25
SNX17-206ENST00000484886 PEX7O00628 323 aa13.48□□□□□ -0.25
SNX17-206ENST00000484886 LGALSLQ3ZCW2 172 aaPredicted RBP13.48□□□□□ -0.25
SNX17-206ENST00000484886 DPPA3Q6W0C5 159 aa13.48□□□□□ -0.25
SNX17-206ENST00000484886 C15orf53Q8NAA6 179 aa13.48□□□□□ -0.25
SNX17-206ENST00000484886 C8orf49Q96NF6 230 aa13.48□□□□□ -0.25
SNX17-206ENST00000484886 TRAV34A0A0B4J273 112 aa13.47□□□□□ -0.25
SNX17-206ENST00000484886 FBLL1A6NHQ2 334 aaKnown RBP13.47□□□□□ -0.25
SNX17-206ENST00000484886 NUDT3O95989 172 aa13.47□□□□□ -0.25
SNX17-206ENST00000484886 MRPL16Q9NX20 251 aaKnown RBP13.47□□□□□ -0.25
SNX17-206ENST00000484886 IGLV2-11P01706 119 aa13.46□□□□□ -0.25
SNX17-206ENST00000484886 H2AFB1P0C5Y9 115 aa13.46□□□□□ -0.25
SNX17-206ENST00000484886 SMUG1Q53HV7 270 aa13.46□□□□□ -0.25
SNX17-206ENST00000484886 EIF5AL1Q6IS14 154 aaKnown RBP13.46□□□□□ -0.25
SNX17-206ENST00000484886 LINC00479Q96M42 142 aa13.46□□□□□ -0.25
SNX17-206ENST00000484886 SPINK4O60575 86 aa13.45□□□□□ -0.26
SNX17-206ENST00000484886 GCGP01275 180 aa13.45□□□□□ -0.26
SNX17-206ENST00000484886 SAPCD1Q5SSQ6 148 aa13.45□□□□□ -0.26
SNX17-206ENST00000484886 POM121L12Q8N7R1 296 aa13.45□□□□□ -0.26
SNX17-206ENST00000484886 MBD3L1Q8WWY6 194 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms