RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 ARPINQ7Z6K5 226 aa1.9□□□□□ -2.11
MCF2-207ENST00000483690 OR5AS1Q8N127 324 aa1.9□□□□□ -2.11
MCF2-207ENST00000483690 MYO18AQ92614 2054 aaKnown RBP1.9□□□□□ -2.11
MCF2-207ENST00000483690 EML5Q05BV3 1969 aa1.9□□□□□ -2.11
MCF2-207ENST00000483690 TET3O43151 1660 aa1.9□□□□□ -2.11
MCF2-207ENST00000483690 CCDC141Q6ZP82 1450 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 CEP152O94986 1710 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 SPHKAPQ2M3C7 1700 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.89□□□□□ -2.11
MCF2-207ENST00000483690 UNC13CQ8NB66 2214 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 CST7O76096 145 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 COX7CP15954 63 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 C3orf62Q6ZUJ4 267 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 PHF5AQ7RTV0 110 aaKnown RBP1.89□□□□□ -2.11
MCF2-207ENST00000483690 LRRC18Q8N456 261 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 OR2H1Q9GZK4 316 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 FAM107BQ9H098 131 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 EHBP1L1Q8N3D4 1523 aa1.89□□□□□ -2.11
MCF2-207ENST00000483690 RGPD1P0DJD0 1748 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 PEAK1Q9H792 1746 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 TRPM1Q7Z4N2 1603 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 EFCAB6Q5THR3 1501 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 IGLV3-32A0A0A0MS00 114 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 hDV103S1A0JD37 113 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 SMCO1Q147U7 214 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 TMEM14EPQ6UXP3 125 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 TMEM138Q9NPI0 162 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 TNFSF18Q9UNG2 199 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 RNF11Q9Y3C5 154 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 MYOM3Q5VTT5 1437 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 PPIP5K1Q6PFW1 1433 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 VPS8Q8N3P4 1428 aa1.88□□□□□ -2.11
MCF2-207ENST00000483690 UTRNP46939 3433 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 FREM3P0C091 2139 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 UQCRHLA0A096LP55 91 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 NCR3O14931 201 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 LYRM1O43325 122 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 MGAMO43451 1857 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 UQCRHP07919 91 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 RPL35P42766 123 aaKnown RBP1.87□□□□□ -2.11
MCF2-207ENST00000483690 DAPK1P53355 1430 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 ARHGEF5Q12774 1597 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 EIF3IQ13347 325 aaKnown RBP1.87□□□□□ -2.11
MCF2-207ENST00000483690 DCUN1D2Q6PH85 259 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 HAGHLQ6PII5 290 aaPredicted RBP1.87□□□□□ -2.11
MCF2-207ENST00000483690 IDO2Q6ZQW0 420 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 UBR1Q8IWV7 1749 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 PLPP5Q8NEB5 264 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 PCBD2Q9H0N5 130 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 PTPRFP10586 1907 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 TMEM131LA2VDJ0 1609 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 PIK3C2BO00750 1634 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 ADGRL2O95490 1459 aa1.87□□□□□ -2.11
MCF2-207ENST00000483690 E9PCH4 1651 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 DUOX2Q9NRD8 1548 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 TECPR2O15040 1411 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 MAP1LC3B2A6NCE7 125 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 APOC1P02654 83 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 TMEM35BQ8NCS4 154 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 BORCS8Q96FH0 119 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 DDA1Q9BW61 102 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 SMPXQ9UHP9 88 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 PTPN23Q9H3S7 1636 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 TRPM2O94759 1503 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 KCPQ6ZWJ8 1503 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 NUP188Q5SRE5 1749 aa1.86□□□□□ -2.11
MCF2-207ENST00000483690 ARHGEF10O15013 1369 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 RFX7Q2KHR2 1363 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 OVOS2A0A0G2JMS6 1433 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 OVOS2A0A0J9YW53 1432 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 ARHGAP31Q2M1Z3 1444 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 OVOS2Q6IE36 1432 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 M0QZK8 103 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 NBEAP1P0C6P0 100 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 OR10AG1Q8NH19 301 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 MAFIPQ8WZ33 124 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 NUBP2Q9Y5Y2 271 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 PXDNQ92626 1479 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 TNS1Q9HBL0 1735 aaKnown RBP1.85□□□□□ -2.11
MCF2-207ENST00000483690 NEXMIFQ5QGS0 1516 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 TULP4Q9NRJ4 1543 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 CASZ1Q86V15 1759 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 RTL9Q8NET4 1388 aa1.85□□□□□ -2.11
MCF2-207ENST00000483690 SIP14410 1827 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 ERBINQ96RT1 1412 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 RRBP1Q9P2E9 1410 aaKnown RBP1.84□□□□□ -2.11
MCF2-207ENST00000483690 ANKRD50Q9ULJ7 1429 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 CROCC2H7BZ55 1655 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 RREB1Q92766 1687 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 A0A1B0GV72 72 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 SRP9P49458 86 aaKnown RBP1.84□□□□□ -2.11
MCF2-207ENST00000483690 TFAMQ00059 246 aaKnown RBP1.84□□□□□ -2.11
MCF2-207ENST00000483690 SMIM5Q71RC9 77 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 FAM216BQ8N7L0 139 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 TCEAL4Q96EI5 215 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 CARD19Q96LW7 228 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 OTORQ9NRC9 128 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 LMTK2Q8IWU2 1503 aa1.84□□□□□ -2.11
MCF2-207ENST00000483690 EIF2AK4Q9P2K8 1649 aaKnown RBP1.84□□□□□ -2.12
MCF2-207ENST00000483690 NRXN3Q9Y4C0 1643 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms