RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 SFT2D1Q8WV19 159 aa11.85□□□□□ -0.51
HMGN1-214ENST00000482733 PLAC8L1A1L4L8 177 aa11.84□□□□□ -0.51
HMGN1-214ENST00000482733 TCTAP57738 103 aa11.84□□□□□ -0.51
HMGN1-214ENST00000482733 UBE2G2P60604 165 aa11.84□□□□□ -0.51
HMGN1-214ENST00000482733 ZNF767PQ75MW2 155 aa11.84□□□□□ -0.51
HMGN1-214ENST00000482733 CYB561D1Q8N8Q1 229 aa11.84□□□□□ -0.51
HMGN1-214ENST00000482733 ZNF680Q8NEM1 530 aa11.84□□□□□ -0.51
HMGN1-214ENST00000482733 ATG101Q9BSB4 218 aa11.84□□□□□ -0.51
HMGN1-214ENST00000482733 NDFIP1Q9BT67 221 aa11.84□□□□□ -0.51
HMGN1-214ENST00000482733 TIMM8BQ9Y5J9 83 aaPredicted RBP11.84□□□□□ -0.51
HMGN1-214ENST00000482733 ARL2-SNX15V9GYD0 113 aa11.84□□□□□ -0.51
HMGN1-214ENST00000482733 DEFB131BA0A096LNP1 70 aa11.83□□□□□ -0.52
HMGN1-214ENST00000482733 A0A1B0GVG6 124 aa11.83□□□□□ -0.52
HMGN1-214ENST00000482733 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
HMGN1-214ENST00000482733 IFNA7P01567 189 aa11.83□□□□□ -0.52
HMGN1-214ENST00000482733 H2AFB1P0C5Y9 115 aa11.83□□□□□ -0.52
HMGN1-214ENST00000482733 DAD1P61803 113 aa11.83□□□□□ -0.52
HMGN1-214ENST00000482733 ANXA2RQ3ZCQ2 193 aa11.83□□□□□ -0.52
HMGN1-214ENST00000482733 PRR9Q5T870 116 aa11.83□□□□□ -0.52
HMGN1-214ENST00000482733 C9orf62Q8N4C0 152 aa11.83□□□□□ -0.52
HMGN1-214ENST00000482733 EIF4E3Q8N5X7 224 aaKnown RBP11.83□□□□□ -0.52
HMGN1-214ENST00000482733 TCEAL7Q9BRU2 100 aa11.83□□□□□ -0.52
HMGN1-214ENST00000482733 TENM2Q9NT68 2774 aa11.82□□□□□ -0.52
HMGN1-214ENST00000482733 TRAV8-1A0A0A6YYK1 113 aa11.82□□□□□ -0.52
HMGN1-214ENST00000482733 LCE6AA0A183 80 aa11.82□□□□□ -0.52
HMGN1-214ENST00000482733 SNURFLB1AK76 121 aa11.82□□□□□ -0.52
HMGN1-214ENST00000482733 RGS13O14921 159 aa11.82□□□□□ -0.52
HMGN1-214ENST00000482733 PPT1P50897 306 aa11.82□□□□□ -0.52
HMGN1-214ENST00000482733 Q6AWC8 147 aa11.82□□□□□ -0.52
HMGN1-214ENST00000482733 TMEM75Q8N9X5 138 aa11.82□□□□□ -0.52
HMGN1-214ENST00000482733 HIST1H2BAQ96A08 127 aa11.82□□□□□ -0.52
HMGN1-214ENST00000482733 TREM1Q9NP99 234 aa11.82□□□□□ -0.52
HMGN1-214ENST00000482733 IGHV1OR15-1A0A075B7D0 117 aa11.81□□□□□ -0.52
HMGN1-214ENST00000482733 CBY3A6NI87 242 aa11.81□□□□□ -0.52
HMGN1-214ENST00000482733 PSG8Q9UQ74 426 aa11.81□□□□□ -0.52
HMGN1-214ENST00000482733 DNAH1Q9P2D7 4330 aa11.8□□□□□ -0.52
HMGN1-214ENST00000482733 F6UZH7 168 aa11.8□□□□□ -0.52
HMGN1-214ENST00000482733 TEX46H3BTG2 121 aa11.8□□□□□ -0.52
HMGN1-214ENST00000482733 SULT1A2P50226 295 aa11.8□□□□□ -0.52
HMGN1-214ENST00000482733 FLI1Q01543 452 aaPredicted RBP11.8□□□□□ -0.52
HMGN1-214ENST00000482733 SAPCD1Q5SSQ6 148 aa11.8□□□□□ -0.52
HMGN1-214ENST00000482733 LYSTQ99698 3801 aa11.8□□□□□ -0.52
HMGN1-214ENST00000482733 NOP10Q9NPE3 64 aaKnown RBP11.8□□□□□ -0.52
HMGN1-214ENST00000482733 ALMS1Q8TCU4 4167 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 TRAV21A0A0B4J279 112 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 IGLL5B9A064 214 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 PEX7O00628 323 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 IGLV2-11P01706 119 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 DEFB130BP0DP73 79 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 DEFB130AP0DP74 79 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
HMGN1-214ENST00000482733 IBA57Q5T440 356 aaKnown RBP11.79□□□□□ -0.52
HMGN1-214ENST00000482733 CST9LP1Q5W188 147 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 TVP23CQ96ET8 276 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 FAM210BQ96KR6 192 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 SGK494Q96LW2 274 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 RYR3Q15413 4870 aa11.79□□□□□ -0.52
HMGN1-214ENST00000482733 TRAV1-1A0A0B4J248 108 aa11.78□□□□□ -0.52
HMGN1-214ENST00000482733 FAM159AQ6UWV7 190 aa11.78□□□□□ -0.52
HMGN1-214ENST00000482733 PRNTQ86SH4 94 aa11.78□□□□□ -0.52
HMGN1-214ENST00000482733 A0A1B0GV50 99 aa11.77□□□□□ -0.53
HMGN1-214ENST00000482733 PAGE4O60829 102 aa11.77□□□□□ -0.53
HMGN1-214ENST00000482733 TCL1AP56279 114 aa11.77□□□□□ -0.53
HMGN1-214ENST00000482733 Q6ZQT7 251 aa11.77□□□□□ -0.53
HMGN1-214ENST00000482733 LINC00612Q8N6U2 182 aa11.77□□□□□ -0.53
HMGN1-214ENST00000482733 C11orf72Q8NBR9 251 aa11.77□□□□□ -0.53
HMGN1-214ENST00000482733 RYR2Q92736 4967 aa11.77□□□□□ -0.53
HMGN1-214ENST00000482733 TRGV11A0A075B6L2 103 aa11.76□□□□□ -0.53
HMGN1-214ENST00000482733 IGHV4-4A0A075B6R2 117 aa11.76□□□□□ -0.53
HMGN1-214ENST00000482733 HTN3P15516 51 aa11.76□□□□□ -0.53
HMGN1-214ENST00000482733 TDRG1Q3Y452 100 aa11.76□□□□□ -0.53
HMGN1-214ENST00000482733 SMUG1Q53HV7 270 aa11.76□□□□□ -0.53
HMGN1-214ENST00000482733 MUC21Q5SSG8 566 aa11.76□□□□□ -0.53
HMGN1-214ENST00000482733 LINC00479Q96M42 142 aa11.76□□□□□ -0.53
HMGN1-214ENST00000482733 MANBALQ9NQG1 85 aa11.76□□□□□ -0.53
HMGN1-214ENST00000482733 GSN-AS1Q9NRJ2 163 aa11.76□□□□□ -0.53
HMGN1-214ENST00000482733 APLNQ9ULZ1 77 aa11.76□□□□□ -0.53
HMGN1-214ENST00000482733 TRAV34A0A0B4J273 112 aa11.75□□□□□ -0.53
HMGN1-214ENST00000482733 ATP5G1P05496 136 aa11.75□□□□□ -0.53
HMGN1-214ENST00000482733 ATP5G3P48201 142 aa11.75□□□□□ -0.53
HMGN1-214ENST00000482733 UBE2G1P62253 170 aa11.75□□□□□ -0.53
HMGN1-214ENST00000482733 ZNF415Q09FC8 603 aa11.75□□□□□ -0.53
HMGN1-214ENST00000482733 LINC00476Q8WZB0 136 aa11.75□□□□□ -0.53
HMGN1-214ENST00000482733 FMC1Q96HJ9 113 aa11.75□□□□□ -0.53
HMGN1-214ENST00000482733 KCNS1Q96KK3 526 aa11.75□□□□□ -0.53
HMGN1-214ENST00000482733 NDUFAF3Q9BU61 184 aa11.75□□□□□ -0.53
HMGN1-214ENST00000482733 TP53TG3Q9ULZ0 132 aa11.75□□□□□ -0.53
HMGN1-214ENST00000482733 TRBV6-1A0A0K0K1D8 114 aa11.74□□□□□ -0.53
HMGN1-214ENST00000482733 GCGP01275 180 aa11.74□□□□□ -0.53
HMGN1-214ENST00000482733 Q86TA4 180 aa11.74□□□□□ -0.53
HMGN1-214ENST00000482733 C8orf49Q96NF6 230 aa11.74□□□□□ -0.53
HMGN1-214ENST00000482733 NAGKQ9UJ70 344 aa11.74□□□□□ -0.53
HMGN1-214ENST00000482733 ZFP30Q9Y2G7 519 aa11.74□□□□□ -0.53
HMGN1-214ENST00000482733 KLF12Q9Y4X4 402 aa11.74□□□□□ -0.53
HMGN1-214ENST00000482733 GAGE12BA1L429 117 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 SPINK4O60575 86 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 GAGE7O76087 117 aa11.73□□□□□ -0.53
HMGN1-214ENST00000482733 S100A9P06702 114 aaKnown RBP11.73□□□□□ -0.53
HMGN1-214ENST00000482733 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
HMGN1-214ENST00000482733 GAGE12FP0CL80 117 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms