RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 KMT2AQ03164 3969 aa13.9□□□□□ -0.18
MSH5-215ENST00000482280 HMGB3O15347 200 aaKnown RBP13.89□□□□□ -0.19
MSH5-215ENST00000482280 EIF3GO75821 320 aaKnown RBP eCLIP13.89□□□□□ -0.19
MSH5-215ENST00000482280 GIPP09681 153 aaPredicted RBP13.89□□□□□ -0.19
MSH5-215ENST00000482280 MUC21Q5SSG8 566 aa13.89□□□□□ -0.19
MSH5-215ENST00000482280 PRR9Q5T870 116 aa13.89□□□□□ -0.19
MSH5-215ENST00000482280 TMED6Q8WW62 240 aa13.89□□□□□ -0.19
MSH5-215ENST00000482280 C18orf15Q96N68 181 aa13.89□□□□□ -0.19
MSH5-215ENST00000482280 PSMG3Q9BT73 122 aaPredicted RBP13.89□□□□□ -0.19
MSH5-215ENST00000482280 LINC00588Q9Y4M8 146 aa13.89□□□□□ -0.19
MSH5-215ENST00000482280 NBDYA0A0U1RRE5 68 aa13.88□□□□□ -0.19
MSH5-215ENST00000482280 K7EQM0 130 aa13.88□□□□□ -0.19
MSH5-215ENST00000482280 SPINK4O60575 86 aa13.88□□□□□ -0.19
MSH5-215ENST00000482280 ARL6IP6Q8N6S5 226 aa13.88□□□□□ -0.19
MSH5-215ENST00000482280 ZNRF2Q8NHG8 242 aa13.88□□□□□ -0.19
MSH5-215ENST00000482280 NDFIP1Q9BT67 221 aa13.88□□□□□ -0.19
MSH5-215ENST00000482280 NAGKQ9UJ70 344 aa13.88□□□□□ -0.19
MSH5-215ENST00000482280 TP53TG3Q9ULZ0 132 aa13.88□□□□□ -0.19
MSH5-215ENST00000482280 TRGV11A0A075B6L2 103 aa13.87□□□□□ -0.19
MSH5-215ENST00000482280 BORCS7-ASMTA0A0B4J1R7 106 aa13.87□□□□□ -0.19
MSH5-215ENST00000482280 SERF2P84101 59 aa13.87□□□□□ -0.19
MSH5-215ENST00000482280 GOLT1AQ6ZVE7 132 aa13.87□□□□□ -0.19
MSH5-215ENST00000482280 OR2G3Q8NGZ4 309 aa13.87□□□□□ -0.19
MSH5-215ENST00000482280 MRPL16Q9NX20 251 aaKnown RBP13.87□□□□□ -0.19
MSH5-215ENST00000482280 FXYD6-FXYD2A0A087WZ82 144 aa13.86□□□□□ -0.19
MSH5-215ENST00000482280 ARL14EPLP0DKL9 152 aa13.86□□□□□ -0.19
MSH5-215ENST00000482280 SLAQ13239 276 aa13.86□□□□□ -0.19
MSH5-215ENST00000482280 RGS21Q2M5E4 152 aa13.86□□□□□ -0.19
MSH5-215ENST00000482280 TTC32Q5I0X7 151 aa13.86□□□□□ -0.19
MSH5-215ENST00000482280 ST6GAL2Q96JF0 529 aa13.86□□□□□ -0.19
MSH5-215ENST00000482280 Q9H8V8 135 aa13.86□□□□□ -0.19
MSH5-215ENST00000482280 VPS13DQ5THJ4 4388 aa13.85□□□□□ -0.19
MSH5-215ENST00000482280 SERTM2A0A1B0GWG4 89 aa13.85□□□□□ -0.19
MSH5-215ENST00000482280 PAX4O43316 350 aa13.85□□□□□ -0.19
MSH5-215ENST00000482280 IGHV3-53P01767 116 aa13.85□□□□□ -0.19
MSH5-215ENST00000482280 ATP6V0CP27449 155 aa13.85□□□□□ -0.19
MSH5-215ENST00000482280 TMEM183BQ1AE95 376 aa13.85□□□□□ -0.19
MSH5-215ENST00000482280 Q6AWC8 147 aa13.85□□□□□ -0.19
MSH5-215ENST00000482280 IQCF2Q8IXL9 164 aa13.85□□□□□ -0.19
MSH5-215ENST00000482280 TMEM183AQ8IXX5 376 aa13.85□□□□□ -0.19
MSH5-215ENST00000482280 RAB24Q969Q5 203 aa13.85□□□□□ -0.19
MSH5-215ENST00000482280 ACTR3CQ9C0K3 210 aaPredicted RBP13.85□□□□□ -0.19
MSH5-215ENST00000482280 TRAV21A0A0B4J279 112 aa13.84□□□□□ -0.19
MSH5-215ENST00000482280 C6orf223Q8N319 242 aa13.84□□□□□ -0.19
MSH5-215ENST00000482280 SPXQ9BT56 116 aa13.84□□□□□ -0.19
MSH5-215ENST00000482280 TREM1Q9NP99 234 aa13.84□□□□□ -0.19
MSH5-215ENST00000482280 TMEM167BQ9NRX6 74 aa13.84□□□□□ -0.19
MSH5-215ENST00000482280 ICOSQ9Y6W8 199 aa13.84□□□□□ -0.19
MSH5-215ENST00000482280 TRGV4A0A0C4DH28 118 aa13.83□□□□□ -0.2
MSH5-215ENST00000482280 CXorf1O96002 111 aa13.83□□□□□ -0.2
MSH5-215ENST00000482280 STAG3L2P0CL84 134 aa13.83□□□□□ -0.2
MSH5-215ENST00000482280 STAG3L3P0CL85 134 aa13.83□□□□□ -0.2
MSH5-215ENST00000482280 Q6ZQT7 251 aa13.83□□□□□ -0.2
MSH5-215ENST00000482280 OR2T35Q8NGX2 323 aa13.83□□□□□ -0.2
MSH5-215ENST00000482280 PRO0255Q9UI72 69 aa13.83□□□□□ -0.2
MSH5-215ENST00000482280 TNFSF18Q9UNG2 199 aa13.83□□□□□ -0.2
MSH5-215ENST00000482280 GCHFRP30047 84 aa13.82□□□□□ -0.2
MSH5-215ENST00000482280 C5orf17Q8NAS9 161 aa13.82□□□□□ -0.2
MSH5-215ENST00000482280 MRPS16Q9Y3D3 137 aaKnown RBP13.82□□□□□ -0.2
MSH5-215ENST00000482280 A0A1B0GVY2 172 aa13.81□□□□□ -0.2
MSH5-215ENST00000482280 GNG5P63218 68 aa13.81□□□□□ -0.2
MSH5-215ENST00000482280 ESRGQ1W209 222 aa13.81□□□□□ -0.2
MSH5-215ENST00000482280 ZFP69Q49AA0 526 aa13.81□□□□□ -0.2
MSH5-215ENST00000482280 PCNPQ8WW12 178 aaKnown RBP13.81□□□□□ -0.2
MSH5-215ENST00000482280 KCNS1Q96KK3 526 aa13.81□□□□□ -0.2
MSH5-215ENST00000482280 SH3BGRL3Q9H299 93 aa13.81□□□□□ -0.2
MSH5-215ENST00000482280 SDF2L1Q9HCN8 221 aa13.81□□□□□ -0.2
MSH5-215ENST00000482280 MDFICQ9P1T7 246 aa13.81□□□□□ -0.2
MSH5-215ENST00000482280 HHLA3Q9XRX5 114 aa13.81□□□□□ -0.2
MSH5-215ENST00000482280 NACAE9PAV3 2078 aa13.8□□□□□ -0.2
MSH5-215ENST00000482280 A0A096LPF7 62 aa13.8□□□□□ -0.2
MSH5-215ENST00000482280 TRAV8-1A0A0A6YYK1 113 aa13.8□□□□□ -0.2
MSH5-215ENST00000482280 F6UZH7 168 aa13.8□□□□□ -0.2
MSH5-215ENST00000482280 Q5BKY6 102 aa13.8□□□□□ -0.2
MSH5-215ENST00000482280 VSIG2Q96IQ7 327 aa13.8□□□□□ -0.2
MSH5-215ENST00000482280 UPK3BQ9BT76 320 aa13.8□□□□□ -0.2
MSH5-215ENST00000482280 RPL7L1Q6DKI1 246 aaKnown RBP13.79□□□□□ -0.2
MSH5-215ENST00000482280 C8orf49Q96NF6 230 aa13.79□□□□□ -0.2
MSH5-215ENST00000482280 TCRAP04437 139 aa13.78□□□□□ -0.2
MSH5-215ENST00000482280 SUMO1P63165 101 aaKnown RBP13.78□□□□□ -0.2
MSH5-215ENST00000482280 MRPL23Q16540 153 aaKnown RBP13.78□□□□□ -0.2
MSH5-215ENST00000482280 TDRG1Q3Y452 100 aa13.78□□□□□ -0.2
MSH5-215ENST00000482280 AKR1C8PQ5T2L2 129 aa13.78□□□□□ -0.2
MSH5-215ENST00000482280 A0A1W2PPQ1 181 aa13.77□□□□□ -0.21
MSH5-215ENST00000482280 FBLL1A6NHQ2 334 aaKnown RBP13.77□□□□□ -0.21
MSH5-215ENST00000482280 TAAR5O14804 337 aa13.77□□□□□ -0.21
MSH5-215ENST00000482280 CRYBA4P53673 196 aa13.77□□□□□ -0.21
MSH5-215ENST00000482280 RASL10AQ92737 203 aa13.77□□□□□ -0.21
MSH5-215ENST00000482280 SGK494Q96LW2 274 aa13.77□□□□□ -0.21
MSH5-215ENST00000482280 FRAS1Q86XX4 4008 aa13.77□□□□□ -0.21
MSH5-215ENST00000482280 RNF222A6NCQ9 220 aa13.76□□□□□ -0.21
MSH5-215ENST00000482280 M0R2P5 195 aa13.76□□□□□ -0.21
MSH5-215ENST00000482280 IFNA7P01567 189 aa13.76□□□□□ -0.21
MSH5-215ENST00000482280 PPT1P50897 306 aa13.76□□□□□ -0.21
MSH5-215ENST00000482280 CYB561D1Q8N8Q1 229 aa13.76□□□□□ -0.21
MSH5-215ENST00000482280 OR4C5Q8NGB2 326 aa13.76□□□□□ -0.21
MSH5-215ENST00000482280 EPDR1Q9UM22 224 aa13.76□□□□□ -0.21
MSH5-215ENST00000482280 PSG8Q9UQ74 426 aa13.76□□□□□ -0.21
MSH5-215ENST00000482280 CTXND1A0A1B0GTU2 59 aa13.75□□□□□ -0.21
MSH5-215ENST00000482280 ARPC5O15511 151 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms