RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 FAM106AQ4KMX7 169 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 PSMG4Q5JS54 123 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 CLEC19AQ6UXS0 136 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 FOXI2Q6ZQN5 318 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 C18orf65Q6ZTR6 163 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 OR10P1Q8NGE3 313 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 ZNF502Q8TBZ5 544 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 CACNG8Q8WXS5 425 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 ATP5SQ99766 215 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 SMIM7Q9BQ49 75 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 RSG1Q9BU20 258 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 MCRIP2Q9BUT9 160 aaKnown RBP4.74□□□□□ -1.65
SF3B1-209ENST00000479532 PEMTQ9UBM1 199 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 ATRQ13535 2644 aa4.74□□□□□ -1.65
SF3B1-209ENST00000479532 IGHV4OR15-8A0A075B7B6 117 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 A0A087WW49 117 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 ZNF320A2RRD8 509 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 OR2T8A6NH00 312 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 C15orf62A8K5M9 175 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 I3L2K1 104 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 K7EIM0 57 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 CRXO43186 299 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-209ENST00000479532 CRISP2P16562 243 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 FCGR2BP31994 310 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-209ENST00000479532 GNG4P50150 75 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 MFAP2P55001 183 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 MEF2BQ02080 365 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-209ENST00000479532 ADIRFQ15847 76 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 PVRIGQ6DKI7 326 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 HIST2H2BDQ6DRA6 164 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 RASL11AQ6T310 242 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 ZNF709Q8N972 641 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 TMEM37Q8WXS4 190 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 KCNS1Q96KK3 526 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 DUX3Q96PT4 197 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 UHRF2Q96PU4 802 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 GNB1LQ9BYB4 327 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 S4R3C0 116 aa4.73□□□□□ -1.65
SF3B1-209ENST00000479532 FBN1P35555 2871 aaKnown RBP4.73□□□□□ -1.65
SF3B1-209ENST00000479532 A6NDN8 102 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 ZFP92A6NM28 416 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 FNDC10F2Z333 226 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 OVOL1O14753 267 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 PDE6DO43924 150 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 STAG3L2P0CL84 134 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 PSG1P11464 419 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 S100A7P31151 101 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 HOXD3P31249 432 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-209ENST00000479532 CRYBA4P53673 196 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 CCL20P78556 96 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 HIST1H1AQ02539 215 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-209ENST00000479532 RAB31Q13636 194 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 TDRG1Q3Y452 100 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 TMEM14EPQ6UXP3 125 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 FA2HQ7L5A8 372 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 TMEM116Q8NCL8 245 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 OR10G9Q8NGN4 311 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 OR4C12Q96R67 309 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 SAMD10Q9BYL1 202 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 SH3BGRL3Q9H299 93 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 MS4A6AQ9H2W1 248 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 VCX2Q9H322 139 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 NPVFQ9HCQ7 196 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 SIGLEC8Q9NYZ4 499 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 UFC1Q9Y3C8 167 aa4.72□□□□□ -1.65
SF3B1-209ENST00000479532 FAM24AA6NFZ4 105 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 H3BRM9 83 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 K7EP34 96 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 LGALS9O00182 355 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 BMPR1BO00238 502 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 NDUFA4O00483 81 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 ZNF324O75467 553 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-209ENST00000479532 TMEM50AO95807 157 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 IFNA5P01569 189 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 TRBV12-3P01733 135 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 IGHV3-48P01763 117 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 PSMB3P49720 205 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 INSL3P51460 131 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 PAX9P55771 341 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 SYNJ2BPP57105 145 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 CKS1BP61024 79 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 SLC38A11Q08AI6 406 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 HSD52Q0P140 79 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 BVES-AS1Q5T3Y7 98 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 C9orf66Q5T8R8 295 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 S100A7AQ86SG5 101 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 GPHB5Q86YW7 130 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 TMEM256Q8N2U0 113 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 TMEM252Q8N6L7 170 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 C5orf17Q8NAS9 161 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 STXBP6Q8NFX7 210 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 FNDC4Q9H6D8 234 aaPredicted RBP4.71□□□□□ -1.66
SF3B1-209ENST00000479532 MRPL16Q9NX20 251 aaKnown RBP4.71□□□□□ -1.66
SF3B1-209ENST00000479532 SPANXCQ9NY87 97 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 ARL2-SNX15V9GYD0 113 aa4.71□□□□□ -1.66
SF3B1-209ENST00000479532 A0A0A0MQY5 61 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 SAP30O75446 220 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 SERF1AO75920 110 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 CST7O76096 145 aa4.7□□□□□ -1.66
SF3B1-209ENST00000479532 CTSGP08311 255 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 309 ms