RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 H2AFB1P0C5Y9 115 aa14.64□□□□□ -0.07
VARS-224ENST00000479051 DAD1P61803 113 aa14.64□□□□□ -0.07
VARS-224ENST00000479051 RNASE8Q8TDE3 154 aaKnown RBP14.64□□□□□ -0.07
VARS-224ENST00000479051 LINC00467Q9BRT7 94 aa14.64□□□□□ -0.07
VARS-224ENST00000479051 PLA2G2EQ9NZK7 142 aa14.64□□□□□ -0.07
VARS-224ENST00000479051 TIMM8BQ9Y5J9 83 aaPredicted RBP14.64□□□□□ -0.07
VARS-224ENST00000479051 FAM74A7A6NL05 159 aa14.63□□□□□ -0.07
VARS-224ENST00000479051 PRR9Q5T870 116 aa14.63□□□□□ -0.07
VARS-224ENST00000479051 C9orf62Q8N4C0 152 aa14.63□□□□□ -0.07
VARS-224ENST00000479051 EIF4E3Q8N5X7 224 aaKnown RBP14.63□□□□□ -0.07
VARS-224ENST00000479051 ZNF680Q8NEM1 530 aa14.63□□□□□ -0.07
VARS-224ENST00000479051 ARL2-SNX15V9GYD0 113 aa14.63□□□□□ -0.07
VARS-224ENST00000479051 CSMD3Q7Z407 3707 aa14.62□□□□□ -0.07
VARS-224ENST00000479051 DEFB131BA0A096LNP1 70 aa14.62□□□□□ -0.07
VARS-224ENST00000479051 TRAV8-1A0A0A6YYK1 113 aa14.62□□□□□ -0.07
VARS-224ENST00000479051 CBY3A6NI87 242 aa14.62□□□□□ -0.07
VARS-224ENST00000479051 SNURFLB1AK76 121 aa14.62□□□□□ -0.07
VARS-224ENST00000479051 PPT1P50897 306 aa14.62□□□□□ -0.07
VARS-224ENST00000479051 TREM1Q9NP99 234 aa14.62□□□□□ -0.07
VARS-224ENST00000479051 PLAC8L1A1L4L8 177 aa14.61□□□□□ -0.07
VARS-224ENST00000479051 F6UZH7 168 aa14.61□□□□□ -0.07
VARS-224ENST00000479051 TEX46H3BTG2 121 aa14.61□□□□□ -0.07
VARS-224ENST00000479051 TCTAP57738 103 aa14.61□□□□□ -0.07
VARS-224ENST00000479051 CST9LP1Q5W188 147 aa14.61□□□□□ -0.07
VARS-224ENST00000479051 TMEM75Q8N9X5 138 aa14.61□□□□□ -0.07
VARS-224ENST00000479051 HIST1H2BAQ96A08 127 aa14.61□□□□□ -0.07
VARS-224ENST00000479051 TCEAL7Q9BRU2 100 aa14.61□□□□□ -0.07
VARS-224ENST00000479051 PSG8Q9UQ74 426 aa14.61□□□□□ -0.07
VARS-224ENST00000479051 TENM2Q9NT68 2774 aa14.6□□□□□ -0.07
VARS-224ENST00000479051 IGHV1OR15-1A0A075B7D0 117 aa14.6□□□□□ -0.07
VARS-224ENST00000479051 PEX7O00628 323 aa14.6□□□□□ -0.07
VARS-224ENST00000479051 FLI1Q01543 452 aaPredicted RBP14.6□□□□□ -0.07
VARS-224ENST00000479051 ANXA2RQ3ZCQ2 193 aa14.6□□□□□ -0.07
VARS-224ENST00000479051 Q6AWC8 147 aa14.6□□□□□ -0.07
VARS-224ENST00000479051 SGK494Q96LW2 274 aa14.6□□□□□ -0.07
VARS-224ENST00000479051 NOP10Q9NPE3 64 aaKnown RBP14.6□□□□□ -0.07
VARS-224ENST00000479051 STARD9Q9P2P6 4700 aa14.59□□□□□ -0.07
VARS-224ENST00000479051 LCE6AA0A183 80 aa14.59□□□□□ -0.07
VARS-224ENST00000479051 A0A1B0GV50 99 aa14.59□□□□□ -0.07
VARS-224ENST00000479051 IGLL5B9A064 214 aa14.59□□□□□ -0.07
VARS-224ENST00000479051 DEFB130BP0DP73 79 aa14.59□□□□□ -0.07
VARS-224ENST00000479051 DEFB130AP0DP74 79 aa14.59□□□□□ -0.07
VARS-224ENST00000479051 SULT1A2P50226 295 aa14.59□□□□□ -0.07
VARS-224ENST00000479051 TRAV21A0A0B4J279 112 aa14.58□□□□□ -0.08
VARS-224ENST00000479051 SAPCD1Q5SSQ6 148 aa14.58□□□□□ -0.08
VARS-224ENST00000479051 FAM159AQ6UWV7 190 aa14.58□□□□□ -0.08
VARS-224ENST00000479051 PRNTQ86SH4 94 aa14.58□□□□□ -0.08
VARS-224ENST00000479051 PAGE4O60829 102 aa14.57□□□□□ -0.08
VARS-224ENST00000479051 HTN3P15516 51 aa14.57□□□□□ -0.08
VARS-224ENST00000479051 IGLV2-11P01706 119 aa14.56□□□□□ -0.08
VARS-224ENST00000479051 DAZ2Q13117 558 aaKnown RBP14.56□□□□□ -0.08
VARS-224ENST00000479051 MUC21Q5SSG8 566 aa14.56□□□□□ -0.08
VARS-224ENST00000479051 IBA57Q5T440 356 aaKnown RBP14.56□□□□□ -0.08
VARS-224ENST00000479051 TVP23CQ96ET8 276 aa14.56□□□□□ -0.08
VARS-224ENST00000479051 NAGKQ9UJ70 344 aa14.56□□□□□ -0.08
VARS-224ENST00000479051 TRGV11A0A075B6L2 103 aa14.55□□□□□ -0.08
VARS-224ENST00000479051 TRAV1-1A0A0B4J248 108 aa14.55□□□□□ -0.08
VARS-224ENST00000479051 SMUG1Q53HV7 270 aa14.55□□□□□ -0.08
VARS-224ENST00000479051 FAM210BQ96KR6 192 aa14.55□□□□□ -0.08
VARS-224ENST00000479051 MANBALQ9NQG1 85 aa14.55□□□□□ -0.08
VARS-224ENST00000479051 GSN-AS1Q9NRJ2 163 aa14.55□□□□□ -0.08
VARS-224ENST00000479051 IGHV4-4A0A075B6R2 117 aa14.54□□□□□ -0.08
VARS-224ENST00000479051 TRAV34A0A0B4J273 112 aa14.54□□□□□ -0.08
VARS-224ENST00000479051 ATP5G1P05496 136 aa14.54□□□□□ -0.08
VARS-224ENST00000479051 ATP5G3P48201 142 aa14.54□□□□□ -0.08
VARS-224ENST00000479051 TCL1AP56279 114 aa14.54□□□□□ -0.08
VARS-224ENST00000479051 UBE2G1P62253 170 aa14.54□□□□□ -0.08
VARS-224ENST00000479051 ZNF415Q09FC8 603 aa14.54□□□□□ -0.08
VARS-224ENST00000479051 Q6ZQT7 251 aa14.54□□□□□ -0.08
VARS-224ENST00000479051 C11orf72Q8NBR9 251 aa14.54□□□□□ -0.08
VARS-224ENST00000479051 FMC1Q96HJ9 113 aa14.54□□□□□ -0.08
VARS-224ENST00000479051 GCGP01275 180 aa14.53□□□□□ -0.08
VARS-224ENST00000479051 AKR1C3P42330 323 aa14.53□□□□□ -0.08
VARS-224ENST00000479051 LINC00479Q96M42 142 aa14.53□□□□□ -0.08
VARS-224ENST00000479051 C8orf49Q96NF6 230 aa14.53□□□□□ -0.08
VARS-224ENST00000479051 NDUFAF3Q9BU61 184 aa14.53□□□□□ -0.08
VARS-224ENST00000479051 TP53TG3Q9ULZ0 132 aa14.53□□□□□ -0.08
VARS-224ENST00000479051 NKX2-5P52952 324 aaPredicted RBP14.52□□□□□ -0.09
VARS-224ENST00000479051 TDRG1Q3Y452 100 aa14.52□□□□□ -0.09
VARS-224ENST00000479051 Q86TA4 180 aa14.52□□□□□ -0.09
VARS-224ENST00000479051 KCNS1Q96KK3 526 aa14.52□□□□□ -0.09
VARS-224ENST00000479051 GNG13Q9P2W3 67 aa14.52□□□□□ -0.09
VARS-224ENST00000479051 GAGE12BA1L429 117 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 GAGE7O76087 117 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 IFNA1P01562 189 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 S100A9P06702 114 aaKnown RBP14.51□□□□□ -0.09
VARS-224ENST00000479051 PFN1P07737 140 aaKnown RBP14.51□□□□□ -0.09
VARS-224ENST00000479051 GAGE12FP0CL80 117 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 GAGE12GP0CL81 117 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 GAGE12IP0CL82 117 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 TMEM183BQ1AE95 376 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 TMEM183AQ8IXX5 376 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 LINC00612Q8N6U2 182 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 LINC00476Q8WZB0 136 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 SDF2L1Q9HCN8 221 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 APLNQ9ULZ1 77 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 ZFP30Q9Y2G7 519 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 KLF12Q9Y4X4 402 aa14.51□□□□□ -0.09
VARS-224ENST00000479051 TRGV1A0A0A0MS02 117 aa14.5□□□□□ -0.09
VARS-224ENST00000479051 F5H768 121 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms