RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 TRIOBPQ9H2D6 2365 aa7.63□□□□□ -1.19
COL13A1-207ENST00000478219 UBE2D1P51668 147 aa7.63□□□□□ -1.19
COL13A1-207ENST00000478219 KLHL30-AS1Q8NEE0 82 aa7.63□□□□□ -1.19
COL13A1-207ENST00000478219 DKK4Q9UBT3 224 aa7.63□□□□□ -1.19
COL13A1-207ENST00000478219 A0A1W2PNU3 283 aaPredicted RBP7.63□□□□□ -1.19
COL13A1-207ENST00000478219 M0R1B8 84 aa7.63□□□□□ -1.19
COL13A1-207ENST00000478219 IGHV1-46P01743 117 aa7.63□□□□□ -1.19
COL13A1-207ENST00000478219 PRTN3P24158 256 aa7.63□□□□□ -1.19
COL13A1-207ENST00000478219 CRIP2P52943 208 aaPredicted RBP7.63□□□□□ -1.19
COL13A1-207ENST00000478219 TMEM78Q5T7P6 136 aa7.63□□□□□ -1.19
COL13A1-207ENST00000478219 DEFB123Q8N688 67 aa7.63□□□□□ -1.19
COL13A1-207ENST00000478219 MYOZ3Q8TDC0 251 aa7.63□□□□□ -1.19
COL13A1-207ENST00000478219 ZDBF2Q9HCK1 2354 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 CD7P09564 240 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 NDUFV3P56181 108 aaKnown RBP7.62□□□□□ -1.19
COL13A1-207ENST00000478219 TNFAIP6P98066 277 aaPredicted RBP7.62□□□□□ -1.19
COL13A1-207ENST00000478219 C3orf36Q3SXR2 165 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 Q6ZQT7 251 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 FBXL15Q9H469 300 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 GPR179Q6PRD1 2367 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 POLEQ07864 2286 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 RHODO00212 210 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 SRD5A1P18405 259 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 LYPD1Q8N2G4 141 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 NRACQ8N912 160 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 RNF125Q96EQ8 232 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 SLC25A15Q9Y619 301 aa7.62□□□□□ -1.19
COL13A1-207ENST00000478219 K7EIM0 57 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 CEACAM4O75871 244 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 IGHG4P01861 327 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 CCL8P80075 99 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 LAGE3Q14657 143 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 VKORC1Q9BQB6 163 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 SPRY4Q9C004 299 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 SIGLEC9Q9Y336 463 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 NCOR1O75376 2440 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 F8VRH5 84 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 LINC01619G3V211 115 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 CRYGBP07316 175 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 GATA4P43694 442 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 ERCC8Q13216 396 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 C22orf34Q6ZV56 151 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 SBSPONQ8IVN8 264 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 CITED2Q99967 270 aaPredicted RBP7.61□□□□□ -1.19
COL13A1-207ENST00000478219 PRADC1Q9BSG0 188 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 CNFNQ9BYD5 112 aa7.61□□□□□ -1.19
COL13A1-207ENST00000478219 GAGE12JA6NER3 117 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 ZNF815PA8K554 130 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 FABP5P3A8MUU1 101 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 A8MWV9 139 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 GAGE7O76087 117 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 GAGE12FP0CL80 117 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 GAGE12GP0CL81 117 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 GAGE12IP0CL82 117 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 SLC25A16P16260 332 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 PLNP26678 52 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 GAGE4Q13068 117 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 LYPD2Q6UXB3 125 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 NDUFA11Q86Y39 141 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 IGFBPL1Q8WX77 278 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 AAMDCQ9H7C9 122 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 C11orf21Q9P2W6 132 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 IGHV3OR16-8A0A075B7F1 116 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 CD40P25942 277 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 SRSF9Q13242 221 aaKnown RBP eCLIP7.6□□□□□ -1.19
COL13A1-207ENST00000478219 FAM159AQ6UWV7 190 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 C3orf56Q8N813 242 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 PRSS33Q8NF86 280 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 CFHR4Q92496 578 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 RAXQ9Y2V3 346 aa7.6□□□□□ -1.19
COL13A1-207ENST00000478219 PRAC2D3DTV9 90 aa7.59□□□□□ -1.19
COL13A1-207ENST00000478219 H7C1H1 209 aa7.59□□□□□ -1.19
COL13A1-207ENST00000478219 SCGB1D4Q6XE38 83 aa7.59□□□□□ -1.19
COL13A1-207ENST00000478219 Q6ZS46 218 aa7.59□□□□□ -1.19
COL13A1-207ENST00000478219 COX8CQ7Z4L0 72 aa7.59□□□□□ -1.19
COL13A1-207ENST00000478219 MAFAQ8NHW3 353 aaPredicted RBP7.59□□□□□ -1.19
COL13A1-207ENST00000478219 RASL10AQ92737 203 aa7.59□□□□□ -1.19
COL13A1-207ENST00000478219 CACNA1BQ00975 2339 aa7.59□□□□□ -1.19
COL13A1-207ENST00000478219 IGLV3-9A0A075B6K5 115 aa7.59□□□□□ -1.2
COL13A1-207ENST00000478219 IGKV3D-20A0A0C4DH25 116 aa7.59□□□□□ -1.2
COL13A1-207ENST00000478219 SPRY2O43597 315 aa7.59□□□□□ -1.2
COL13A1-207ENST00000478219 GAGE2BQ13066 116 aa7.59□□□□□ -1.2
COL13A1-207ENST00000478219 GAGE2EQ4V326 116 aa7.59□□□□□ -1.2
COL13A1-207ENST00000478219 TRPT1Q86TN4 253 aaKnown RBP7.59□□□□□ -1.2
COL13A1-207ENST00000478219 PPP1R27Q86WC6 154 aa7.59□□□□□ -1.2
COL13A1-207ENST00000478219 OR11H6Q8NGC7 330 aa7.59□□□□□ -1.2
COL13A1-207ENST00000478219 GAGE2DQ9UEU5 116 aa7.59□□□□□ -1.2
COL13A1-207ENST00000478219 TRAV8-2A0A0B4J237 113 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 CFC1BP0CG36 223 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 CFC1P0CG37 223 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 COX6B1P14854 86 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 GLRXP35754 106 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 TMEM30BQ3MIR4 351 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 CNOT1A5YKK6 2376 aaKnown RBP7.58□□□□□ -1.2
COL13A1-207ENST00000478219 EMP1P54849 157 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 TEX36Q5VZQ5 186 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 DYNAPQ8N1N2 210 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 DEFB104AQ8WTQ1 72 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 SMAD5-AS1Q9Y6J3 95 aa7.58□□□□□ -1.2
COL13A1-207ENST00000478219 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms