RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 LENEPQ9Y5L5 61 aa11.39□□□□□ -0.59
COL1A1-205ENST00000476387 FAT2Q9NYQ8 4349 aa11.39□□□□□ -0.59
COL1A1-205ENST00000476387 IGHV1OR15-1A0A075B7D0 117 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 GAGE12BA1L429 117 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 PRSS29PA6NIE9 313 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 TAAR5O14804 337 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 GAGE7O76087 117 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 CXorf1O96002 111 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 GAGE12FP0CL80 117 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 GAGE12GP0CL81 117 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 GAGE12IP0CL82 117 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 GCHFRP30047 84 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 DAZ2Q13117 558 aaKnown RBP11.38□□□□□ -0.59
COL1A1-205ENST00000476387 GOLT1AQ6ZVE7 132 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 IQCF2Q8IXL9 164 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 ARL6IP6Q8N6S5 226 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 LINC00612Q8N6U2 182 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 TMED6Q8WW62 240 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 TMEM167BQ9NRX6 74 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 PKHD1P08F94 4074 aa11.38□□□□□ -0.59
COL1A1-205ENST00000476387 KIAA1109Q2LD37 5005 aa11.37□□□□□ -0.59
COL1A1-205ENST00000476387 NACAE9PAV3 2078 aa11.37□□□□□ -0.59
COL1A1-205ENST00000476387 AKR1C8PQ5T2L2 129 aa11.37□□□□□ -0.59
COL1A1-205ENST00000476387 C11orf72Q8NBR9 251 aa11.37□□□□□ -0.59
COL1A1-205ENST00000476387 ST6GAL2Q96JF0 529 aa11.37□□□□□ -0.59
COL1A1-205ENST00000476387 DNAH17Q9UFH2 4485 aa11.37□□□□□ -0.59
COL1A1-205ENST00000476387 DNAH2Q9P225 4427 aa11.36□□□□□ -0.59
COL1A1-205ENST00000476387 IGLV2-18A0A075B6J9 118 aa11.36□□□□□ -0.59
COL1A1-205ENST00000476387 SMLR1H3BR10 107 aa11.36□□□□□ -0.59
COL1A1-205ENST00000476387 NUDT3O95989 172 aa11.36□□□□□ -0.59
COL1A1-205ENST00000476387 TCL1AP56279 114 aa11.36□□□□□ -0.59
COL1A1-205ENST00000476387 GNG5P63218 68 aa11.36□□□□□ -0.59
COL1A1-205ENST00000476387 IBA57Q5T440 356 aaKnown RBP11.36□□□□□ -0.59
COL1A1-205ENST00000476387 Q6ZTI0 123 aa11.36□□□□□ -0.59
COL1A1-205ENST00000476387 C5orf17Q8NAS9 161 aa11.36□□□□□ -0.59
COL1A1-205ENST00000476387 TRGV2A0A075B6R0 118 aa11.35□□□□□ -0.59
COL1A1-205ENST00000476387 TRGV1A0A0A0MS02 117 aa11.35□□□□□ -0.59
COL1A1-205ENST00000476387 CTXND1A0A1B0GTU2 59 aa11.35□□□□□ -0.59
COL1A1-205ENST00000476387 SERTM2A0A1B0GWG4 89 aa11.35□□□□□ -0.59
COL1A1-205ENST00000476387 K7EQM0 130 aa11.35□□□□□ -0.59
COL1A1-205ENST00000476387 ZNF415Q09FC8 603 aa11.35□□□□□ -0.59
COL1A1-205ENST00000476387 OR5I1Q13606 314 aa11.35□□□□□ -0.59
COL1A1-205ENST00000476387 SOHLH1Q5JUK2 328 aa11.35□□□□□ -0.59
COL1A1-205ENST00000476387 ATG101Q9BSB4 218 aa11.35□□□□□ -0.59
COL1A1-205ENST00000476387 NDFIP1Q9BT67 221 aa11.35□□□□□ -0.59
COL1A1-205ENST00000476387 MUC4Q99102 2169 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 MUC21Q5SSG8 566 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 Q6AWC8 147 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 FAM159AQ6UWV7 190 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 Q6ZQT7 251 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 SUN5Q8TC36 379 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 KRTAP17-1Q9BYP8 105 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 TMPRSS5Q9H3S3 457 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 TP53TG3Q9ULZ0 132 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 KLF12Q9Y4X4 402 aa11.34□□□□□ -0.59
COL1A1-205ENST00000476387 TRAV8-1A0A0A6YYK1 113 aa11.33□□□□□ -0.6
COL1A1-205ENST00000476387 ZNF345Q14585 488 aa11.33□□□□□ -0.6
COL1A1-205ENST00000476387 TREM1Q9NP99 234 aa11.33□□□□□ -0.6
COL1A1-205ENST00000476387 NAGKQ9UJ70 344 aa11.33□□□□□ -0.6
COL1A1-205ENST00000476387 PCLOQ9Y6V0 5065 aa11.32□□□□□ -0.6
COL1A1-205ENST00000476387 TRGV11A0A075B6L2 103 aa11.32□□□□□ -0.6
COL1A1-205ENST00000476387 TRAV26-1A0A087WT03 109 aa11.32□□□□□ -0.6
COL1A1-205ENST00000476387 TRAV21A0A0B4J279 112 aa11.32□□□□□ -0.6
COL1A1-205ENST00000476387 GGTLC3B5MD39 225 aa11.32□□□□□ -0.6
COL1A1-205ENST00000476387 F6UZH7 168 aa11.32□□□□□ -0.6
COL1A1-205ENST00000476387 SPINK4O60575 86 aa11.32□□□□□ -0.6
COL1A1-205ENST00000476387 TCRAP04437 139 aa11.32□□□□□ -0.6
COL1A1-205ENST00000476387 SUMO1P63165 101 aaKnown RBP11.32□□□□□ -0.6
COL1A1-205ENST00000476387 KCNRGQ8N5I3 272 aa11.32□□□□□ -0.6
COL1A1-205ENST00000476387 CYTL1Q9NRR1 136 aa11.32□□□□□ -0.6
COL1A1-205ENST00000476387 A0A0J9YY99 117 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 A0A1W2PRE2 83 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 HMSDA8MTL9 139 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 MED14OSP0DP75 135 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 HOXA5P20719 270 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 TMEM183BQ1AE95 376 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 C1orf134Q5TEV5 83 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 TMEM183AQ8IXX5 376 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 CYB561D1Q8N8Q1 229 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 C18orf15Q96N68 181 aa11.31□□□□□ -0.6
COL1A1-205ENST00000476387 A0A0D9SG52 128 aa11.3□□□□□ -0.6
COL1A1-205ENST00000476387 KANTRA0A1W2PQU2 76 aa11.3□□□□□ -0.6
COL1A1-205ENST00000476387 MAP1LC3B2A6NCE7 125 aa11.3□□□□□ -0.6
COL1A1-205ENST00000476387 CCL18P55774 89 aa11.3□□□□□ -0.6
COL1A1-205ENST00000476387 ZFP69Q49AA0 526 aa11.3□□□□□ -0.6
COL1A1-205ENST00000476387 SGK494Q96LW2 274 aa11.3□□□□□ -0.6
COL1A1-205ENST00000476387 MAP1LC3BQ9GZQ8 125 aa11.3□□□□□ -0.6
COL1A1-205ENST00000476387 MRPL16Q9NX20 251 aaKnown RBP11.3□□□□□ -0.6
COL1A1-205ENST00000476387 EPDR1Q9UM22 224 aa11.3□□□□□ -0.6
COL1A1-205ENST00000476387 FBLL1A6NHQ2 334 aaKnown RBP11.29□□□□□ -0.6
COL1A1-205ENST00000476387 IFNA7P01567 189 aa11.29□□□□□ -0.6
COL1A1-205ENST00000476387 FGF8P55075 233 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-205ENST00000476387 UBE2G2P60604 165 aa11.29□□□□□ -0.6
COL1A1-205ENST00000476387 TMEM75Q8N9X5 138 aa11.29□□□□□ -0.6
COL1A1-205ENST00000476387 OR11H4Q8NGC9 324 aa11.29□□□□□ -0.6
COL1A1-205ENST00000476387 TVP23CQ96ET8 276 aa11.29□□□□□ -0.6
COL1A1-205ENST00000476387 ZNF471Q9BX82 626 aaPredicted RBP11.29□□□□□ -0.6
COL1A1-205ENST00000476387 PSG8Q9UQ74 426 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms