RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 OR5D18Q8NGL1 313 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 OR10K1Q8NGX5 313 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 OR10X1Q8NGY0 326 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 TNFAIP8L1Q8WVP5 186 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 ARL11Q969Q4 196 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 GALMQ96C23 342 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 GPER1Q99527 375 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 C9orf16Q9BUW7 83 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 METTL9Q9H1A3 318 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 TMEM138Q9NPI0 162 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 LINC00527Q9UJ94 153 aa1.88□□□□□ -2.11
PTCD3-211ENST00000476215 AMMECR1Q9Y4X0 333 aaPredicted RBP1.88□□□□□ -2.11
PTCD3-211ENST00000476215 TMEM30CPA0ZSE6 113 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 ZNF736B4DX44 427 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-211ENST00000476215 MCRIP1C9JLW8 97 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 BOLA2-SMG1P6H3BVE0 249 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 SDCBPO00560 298 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-211ENST00000476215 OR7C1O76099 320 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-211ENST00000476215 TNFAIP8O95379 198 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 CD2P06729 351 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 CRYGDP07320 174 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 NQO2P16083 231 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 BLVRBP30043 206 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-211ENST00000476215 RCVRNP35243 200 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 ZNF93P35789 620 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-211ENST00000476215 REG1BP48304 166 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 GNG10P50151 68 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 RBM11P57052 281 aaKnown RBP1.87□□□□□ -2.11
PTCD3-211ENST00000476215 GABARAPL2P60520 117 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 SLC35A2P78381 396 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 MPV17LQ2QL34 196 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 GLIPR1L1Q6UWM5 242 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 SLC35E3Q7Z769 313 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 STX19Q8N4C7 294 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 ZNF439Q8NDP4 499 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 OR51D1Q8NGF3 324 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 OR2T10Q8NGZ9 312 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 TMEM106AQ96A25 262 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 MRPS24Q96EL2 167 aaKnown RBP1.87□□□□□ -2.11
PTCD3-211ENST00000476215 CPNE2Q96FN4 548 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-211ENST00000476215 S100A13Q99584 98 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 TAF9BQ9HBM6 251 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 SPACA1Q9HBV2 294 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 TAS2R4Q9NYW5 299 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 SORL1Q92673 2214 aa1.87□□□□□ -2.11
PTCD3-211ENST00000476215 STARD9Q9P2P6 4700 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 IRGMA1A4Y4 181 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 EFCAB10A6NFE3 127 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 I3L521 148 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 SULT1C2O00338 296 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 HBZP02008 142 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 MYL12AP19105 171 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 PSMB8P28062 276 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 PPP1CCP36873 323 aaKnown RBP1.86□□□□□ -2.11
PTCD3-211ENST00000476215 ZNF137PP52743 207 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 PPP3R1P63098 170 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 QRFPP83859 136 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 RUNX1Q01196 453 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 MED21Q13503 144 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 MORN2Q502X0 79 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 ACSM3Q53FZ2 586 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 ZNF767PQ75MW2 155 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 ZFAND2AQ8N6M9 145 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 PACRGLQ8N7B6 248 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 OR4C16Q8NGL9 310 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 OR4K15Q8NH41 348 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 SUN5Q8TC36 379 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 MYOZ3Q8TDC0 251 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 NEK7Q8TDX7 302 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 CYGBQ8WWM9 190 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 SMIM19Q96E16 107 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 KCTD7Q96MP8 289 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 NABP2Q9BQ15 211 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 HSPB9Q9BQS6 159 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 BANF2Q9H503 90 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 CKLFQ9UBR5 152 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 TRAPPC2LQ9UL33 140 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 NUBP2Q9Y5Y2 271 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 RYR2Q92736 4967 aa1.86□□□□□ -2.11
PTCD3-211ENST00000476215 TRAV41A0A0B4J266 112 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 PNMA8CA0A1B0GUJ8 204 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 G3V318 75 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 AIPO00170 330 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 ITGB1BP1O14713 200 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 SLC22A1O15245 554 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 YPEL1O60688 119 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 NAPSAO96009 420 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 HLA-DRB1P01911 266 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 UBBP0CG47 229 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 ACTBP60709 375 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 INSL4Q14641 139 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 DEFB136Q30KP8 78 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 AKIRIN2Q53H80 203 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 OGFRL1Q5TC84 451 aaPredicted RBP1.85□□□□□ -2.11
PTCD3-211ENST00000476215 GLT8D1Q68CQ7 371 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 OR10K2Q6IF99 312 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 SDIM1Q6ZPB5 146 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 ZNF833PQ6ZTB9 187 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 C6orf201Q7Z4U5 140 aa1.85□□□□□ -2.11
PTCD3-211ENST00000476215 C8orf59Q8N0T1 100 aaPredicted RBP1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms