RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ATRAIDQ6UW56 229 aa11.51□□□□□ -0.57
CPSF3-203ENST00000475482 SFRP2Q96HF1 295 aa11.51□□□□□ -0.57
CPSF3-203ENST00000475482 LINC00477Q96M19 166 aa11.51□□□□□ -0.57
CPSF3-203ENST00000475482 OVOL2Q9BRP0 275 aa11.51□□□□□ -0.57
CPSF3-203ENST00000475482 LENEPQ9Y5L5 61 aa11.51□□□□□ -0.57
CPSF3-203ENST00000475482 LYSTQ99698 3801 aa11.5□□□□□ -0.57
CPSF3-203ENST00000475482 TRAV8-1A0A0A6YYK1 113 aa11.5□□□□□ -0.57
CPSF3-203ENST00000475482 PGPEP1LA6NFU8 196 aa11.5□□□□□ -0.57
CPSF3-203ENST00000475482 H7BYZ3 331 aa11.5□□□□□ -0.57
CPSF3-203ENST00000475482 TFPI2P48307 235 aa11.5□□□□□ -0.57
CPSF3-203ENST00000475482 CMC4P56277 68 aaPredicted RBP11.5□□□□□ -0.57
CPSF3-203ENST00000475482 ERVFC1-1P60608 527 aa11.5□□□□□ -0.57
CPSF3-203ENST00000475482 C9orf47Q6ZRZ4 202 aa11.5□□□□□ -0.57
CPSF3-203ENST00000475482 DAZAP1Q96EP5 407 aaKnown RBP11.5□□□□□ -0.57
CPSF3-203ENST00000475482 SGK494Q96LW2 274 aa11.5□□□□□ -0.57
CPSF3-203ENST00000475482 PPP1R14DQ9NXH3 145 aa11.5□□□□□ -0.57
CPSF3-203ENST00000475482 IGLV2-8P01709 118 aa11.49□□□□□ -0.57
CPSF3-203ENST00000475482 ZNF138P52744 262 aa11.49□□□□□ -0.57
CPSF3-203ENST00000475482 RNF212Q495C1 297 aa11.49□□□□□ -0.57
CPSF3-203ENST00000475482 ZFAND6Q6FIF0 208 aa11.49□□□□□ -0.57
CPSF3-203ENST00000475482 OR10G8Q8NGN5 311 aa11.49□□□□□ -0.57
CPSF3-203ENST00000475482 C20orf173Q96LM9 149 aa11.49□□□□□ -0.57
CPSF3-203ENST00000475482 MLST8Q9BVC4 326 aa11.49□□□□□ -0.57
CPSF3-203ENST00000475482 OSTCQ9NRP0 149 aa11.49□□□□□ -0.57
CPSF3-203ENST00000475482 KIR2DL5BA0A0G2JN68 375 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 KIR2DL5BA0A0G2JPC4 375 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 K7EN84 100 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 ZNF688P0C7X2 276 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 S100PP25815 95 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 BTN1A1Q13410 526 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 PSMG4Q5JS54 123 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 IBA57Q5T440 356 aaKnown RBP11.48□□□□□ -0.57
CPSF3-203ENST00000475482 EBLN2Q6P2I7 272 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 FAM231DQ6ZW35 169 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 Q6ZWC4 215 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 KIR2DL5AQ8N109 375 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 OR8A1Q8NGG7 326 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 KIR2DL5BQ8NHK3 375 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 VGLL1Q99990 258 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 ZNF492Q9P255 531 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 TP53TG1Q9Y2A0 90 aa11.48□□□□□ -0.57
CPSF3-203ENST00000475482 DNAH1Q9P2D7 4330 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 TRBV7-9A0A0J9YWB2 115 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 LCE6AA0A183 80 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 PRAC2D3DTV9 90 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 NPIPB6E9PJ23 425 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 UBE2CO00762 179 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 SCO1O75880 301 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 DUSP14O95147 198 aaKnown RBP11.47□□□□□ -0.57
CPSF3-203ENST00000475482 SMUG1Q53HV7 270 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 COX8CQ7Z4L0 72 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 NHLRC2Q8NBF2 726 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 IL17DQ8TAD2 202 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
CPSF3-203ENST00000475482 PLECQ15149 4684 aaKnown RBP11.46□□□□□ -0.57
CPSF3-203ENST00000475482 APOC4P55056 127 aa11.46□□□□□ -0.57
CPSF3-203ENST00000475482 HIST1H1AQ02539 215 aaPredicted RBP11.46□□□□□ -0.57
CPSF3-203ENST00000475482 ERCC8Q13216 396 aa11.46□□□□□ -0.57
CPSF3-203ENST00000475482 OR5I1Q13606 314 aa11.46□□□□□ -0.57
CPSF3-203ENST00000475482 PRR27Q6MZM9 219 aa11.46□□□□□ -0.57
CPSF3-203ENST00000475482 KCNIP4Q6PIL6 250 aa11.46□□□□□ -0.57
CPSF3-203ENST00000475482 FOXI2Q6ZQN5 318 aa11.46□□□□□ -0.57
CPSF3-203ENST00000475482 IMMP2LQ96T52 175 aa11.46□□□□□ -0.57
CPSF3-203ENST00000475482 GATCO43716 136 aaKnown RBP11.45□□□□□ -0.58
CPSF3-203ENST00000475482 P01737 135 aa11.45□□□□□ -0.58
CPSF3-203ENST00000475482 BTF3L4Q96K17 158 aa11.45□□□□□ -0.58
CPSF3-203ENST00000475482 MAP6D1Q9H9H5 199 aa11.45□□□□□ -0.58
CPSF3-203ENST00000475482 AGRNO00468 2067 aa11.44□□□□□ -0.58
CPSF3-203ENST00000475482 ZNF705GA8MUZ8 300 aaPredicted RBP11.44□□□□□ -0.58
CPSF3-203ENST00000475482 RPL19P84098 196 aaKnown RBP11.44□□□□□ -0.58
CPSF3-203ENST00000475482 FAM162BQ5T6X4 162 aa11.44□□□□□ -0.58
CPSF3-203ENST00000475482 TMEM88Q6PEY1 159 aa11.44□□□□□ -0.58
CPSF3-203ENST00000475482 CBLN2Q8IUK8 224 aa11.44□□□□□ -0.58
CPSF3-203ENST00000475482 APRG1Q8IVJ8 170 aa11.44□□□□□ -0.58
CPSF3-203ENST00000475482 OR4B1Q8NGF8 309 aa11.44□□□□□ -0.58
CPSF3-203ENST00000475482 RNF183Q96D59 192 aa11.44□□□□□ -0.58
CPSF3-203ENST00000475482 ODF3Q96PU9 254 aa11.44□□□□□ -0.58
CPSF3-203ENST00000475482 A0A0J9YX75 114 aa11.43□□□□□ -0.58
CPSF3-203ENST00000475482 SPRY2O43597 315 aa11.43□□□□□ -0.58
CPSF3-203ENST00000475482 ZNF124Q15973 351 aa11.43□□□□□ -0.58
CPSF3-203ENST00000475482 CT83Q5H943 113 aa11.43□□□□□ -0.58
CPSF3-203ENST00000475482 FAM24BQ8N5W8 94 aa11.43□□□□□ -0.58
CPSF3-203ENST00000475482 Q8TAT8 98 aa11.43□□□□□ -0.58
CPSF3-203ENST00000475482 ZC2HC1AQ96GY0 325 aa11.43□□□□□ -0.58
CPSF3-203ENST00000475482 RNASE7Q9H1E1 156 aaKnown RBP11.43□□□□□ -0.58
CPSF3-203ENST00000475482 SAV1Q9H4B6 383 aaPredicted RBP11.43□□□□□ -0.58
CPSF3-203ENST00000475482 XKRY2A2RUG3 117 aa11.42□□□□□ -0.58
CPSF3-203ENST00000475482 C19orf71A6NCJ1 209 aa11.42□□□□□ -0.58
CPSF3-203ENST00000475482 FABP5P3A8MUU1 101 aa11.42□□□□□ -0.58
CPSF3-203ENST00000475482 TSPOP30536 169 aa11.42□□□□□ -0.58
CPSF3-203ENST00000475482 LEPP41159 167 aa11.42□□□□□ -0.58
CPSF3-203ENST00000475482 DEFB131AP59861 70 aa11.42□□□□□ -0.58
CPSF3-203ENST00000475482 DEFB135Q30KP9 77 aa11.42□□□□□ -0.58
CPSF3-203ENST00000475482 NUDT10Q8NFP7 164 aa11.42□□□□□ -0.58
CPSF3-203ENST00000475482 NUDT11Q96G61 164 aa11.42□□□□□ -0.58
CPSF3-203ENST00000475482 C8orf49Q96NF6 230 aa11.42□□□□□ -0.58
CPSF3-203ENST00000475482 RPP21Q9H633 154 aaKnown RBP11.42□□□□□ -0.58
CPSF3-203ENST00000475482 TRAV9-1A0A075B6T8 112 aa11.41□□□□□ -0.58
CPSF3-203ENST00000475482 A8MWL6 223 aa11.41□□□□□ -0.58
CPSF3-203ENST00000475482 RPL35AP18077 110 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms