RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 ACTR3CQ9C0K3 210 aaPredicted RBP14.37□□□□□ -0.11
SNX13-206ENST00000474067 KMT2AQ03164 3969 aa14.36□□□□□ -0.11
SNX13-206ENST00000474067 TRAV26-1A0A087WT03 109 aa14.36□□□□□ -0.11
SNX13-206ENST00000474067 FXYD6-FXYD2A0A087WZ82 144 aa14.36□□□□□ -0.11
SNX13-206ENST00000474067 FBLL1A6NHQ2 334 aaKnown RBP14.36□□□□□ -0.11
SNX13-206ENST00000474067 CXorf1O96002 111 aa14.36□□□□□ -0.11
SNX13-206ENST00000474067 STAG3L2P0CL84 134 aa14.36□□□□□ -0.11
SNX13-206ENST00000474067 STAG3L3P0CL85 134 aa14.36□□□□□ -0.11
SNX13-206ENST00000474067 ATP6V0CP27449 155 aa14.36□□□□□ -0.11
SNX13-206ENST00000474067 OR2T35Q8NGX2 323 aa14.36□□□□□ -0.11
SNX13-206ENST00000474067 Q8TAT8 98 aa14.36□□□□□ -0.11
SNX13-206ENST00000474067 M0R2N4 97 aa14.35□□□□□ -0.11
SNX13-206ENST00000474067 TAAR5O14804 337 aa14.35□□□□□ -0.11
SNX13-206ENST00000474067 SPINK4O60575 86 aa14.35□□□□□ -0.11
SNX13-206ENST00000474067 ARL14EPLP0DKL9 152 aa14.35□□□□□ -0.11
SNX13-206ENST00000474067 Q6AWC8 147 aa14.35□□□□□ -0.11
SNX13-206ENST00000474067 Q6ZTI0 123 aa14.35□□□□□ -0.11
SNX13-206ENST00000474067 RPH3ALQ9UNE2 315 aa14.35□□□□□ -0.11
SNX13-206ENST00000474067 IGLV2-18A0A075B6J9 118 aa14.34□□□□□ -0.11
SNX13-206ENST00000474067 TRAV21A0A0B4J279 112 aa14.34□□□□□ -0.11
SNX13-206ENST00000474067 C5orf17Q8NAS9 161 aa14.34□□□□□ -0.11
SNX13-206ENST00000474067 RAB24Q969Q5 203 aa14.34□□□□□ -0.11
SNX13-206ENST00000474067 SPXQ9BT56 116 aa14.34□□□□□ -0.11
SNX13-206ENST00000474067 KLF12Q9Y4X4 402 aa14.34□□□□□ -0.11
SNX13-206ENST00000474067 EPPK1P58107 5090 aaKnown RBP14.33□□□□□ -0.11
SNX13-206ENST00000474067 GOLT1AQ6ZVE7 132 aa14.33□□□□□ -0.12
SNX13-206ENST00000474067 KCNS1Q96KK3 526 aa14.33□□□□□ -0.12
SNX13-206ENST00000474067 TMPRSS5Q9H3S3 457 aa14.33□□□□□ -0.12
SNX13-206ENST00000474067 ZFP69Q49AA0 526 aa14.32□□□□□ -0.12
SNX13-206ENST00000474067 TTC32Q5I0X7 151 aa14.32□□□□□ -0.12
SNX13-206ENST00000474067 C1orf134Q5TEV5 83 aa14.32□□□□□ -0.12
SNX13-206ENST00000474067 Q6ZR54 194 aa14.32□□□□□ -0.12
SNX13-206ENST00000474067 TREM1Q9NP99 234 aa14.32□□□□□ -0.12
SNX13-206ENST00000474067 PRSS29PA6NIE9 313 aa14.31□□□□□ -0.12
SNX13-206ENST00000474067 HMGB3O15347 200 aaKnown RBP14.31□□□□□ -0.12
SNX13-206ENST00000474067 GCHFRP30047 84 aa14.31□□□□□ -0.12
SNX13-206ENST00000474067 PRR9Q5T870 116 aa14.31□□□□□ -0.12
SNX13-206ENST00000474067 SSX7Q7RTT5 188 aa14.31□□□□□ -0.12
SNX13-206ENST00000474067 NKX6-2Q9C056 277 aaPredicted RBP14.31□□□□□ -0.12
SNX13-206ENST00000474067 A0A0J9YY99 117 aa14.3□□□□□ -0.12
SNX13-206ENST00000474067 TDRG1Q3Y452 100 aa14.3□□□□□ -0.12
SNX13-206ENST00000474067 AKR1C8PQ5T2L2 129 aa14.3□□□□□ -0.12
SNX13-206ENST00000474067 SUN5Q8TC36 379 aa14.3□□□□□ -0.12
SNX13-206ENST00000474067 BIRC6Q9NR09 4857 aa14.3□□□□□ -0.12
SNX13-206ENST00000474067 RNF222A6NCQ9 220 aa14.29□□□□□ -0.12
SNX13-206ENST00000474067 HOXA5P20719 270 aa14.29□□□□□ -0.12
SNX13-206ENST00000474067 MUC21Q5SSG8 566 aa14.29□□□□□ -0.12
SNX13-206ENST00000474067 IQCF2Q8IXL9 164 aa14.29□□□□□ -0.12
SNX13-206ENST00000474067 ZNRF2Q8NHG8 242 aa14.29□□□□□ -0.12
SNX13-206ENST00000474067 SDF2L1Q9HCN8 221 aa14.29□□□□□ -0.12
SNX13-206ENST00000474067 PRO0255Q9UI72 69 aa14.29□□□□□ -0.12
SNX13-206ENST00000474067 TP53TG3Q9ULZ0 132 aa14.29□□□□□ -0.12
SNX13-206ENST00000474067 LINC00588Q9Y4M8 146 aa14.29□□□□□ -0.12
SNX13-206ENST00000474067 NBDYA0A0U1RRE5 68 aa14.28□□□□□ -0.12
SNX13-206ENST00000474067 CTXND1A0A1B0GTU2 59 aa14.28□□□□□ -0.12
SNX13-206ENST00000474067 PPT1P50897 306 aa14.28□□□□□ -0.12
SNX13-206ENST00000474067 RPL7L1Q6DKI1 246 aaKnown RBP14.28□□□□□ -0.12
SNX13-206ENST00000474067 UPK3BQ9BT76 320 aa14.28□□□□□ -0.12
SNX13-206ENST00000474067 NAGKQ9UJ70 344 aa14.28□□□□□ -0.12
SNX13-206ENST00000474067 ICOSQ9Y6W8 199 aa14.28□□□□□ -0.12
SNX13-206ENST00000474067 A0A1W2PRE2 83 aa14.27□□□□□ -0.13
SNX13-206ENST00000474067 PAX4O43316 350 aa14.27□□□□□ -0.13
SNX13-206ENST00000474067 TCRAP04437 139 aa14.27□□□□□ -0.13
SNX13-206ENST00000474067 BTF3P20290 206 aaKnown RBP14.27□□□□□ -0.13
SNX13-206ENST00000474067 TMEM183BQ1AE95 376 aa14.27□□□□□ -0.13
SNX13-206ENST00000474067 Q5BKY6 102 aa14.27□□□□□ -0.13
SNX13-206ENST00000474067 SAPCD1Q5SSQ6 148 aa14.27□□□□□ -0.13
SNX13-206ENST00000474067 TMEM183AQ8IXX5 376 aa14.27□□□□□ -0.13
SNX13-206ENST00000474067 CYB561D1Q8N8Q1 229 aa14.27□□□□□ -0.13
SNX13-206ENST00000474067 MRPL16Q9NX20 251 aaKnown RBP14.27□□□□□ -0.13
SNX13-206ENST00000474067 ARPC5O15511 151 aa14.26□□□□□ -0.13
SNX13-206ENST00000474067 SUMO1P63165 101 aaKnown RBP14.26□□□□□ -0.13
SNX13-206ENST00000474067 STOML3Q8TAV4 291 aa14.26□□□□□ -0.13
SNX13-206ENST00000474067 RASL10AQ92737 203 aa14.26□□□□□ -0.13
SNX13-206ENST00000474067 SH3BGRL3Q9H299 93 aa14.26□□□□□ -0.13
SNX13-206ENST00000474067 Q9H8V8 135 aa14.26□□□□□ -0.13
SNX13-206ENST00000474067 TRGV4A0A0C4DH28 118 aa14.25□□□□□ -0.13
SNX13-206ENST00000474067 A0A1W2PPQ1 181 aa14.25□□□□□ -0.13
SNX13-206ENST00000474067 RTL8CO15255 209 aa14.25□□□□□ -0.13
SNX13-206ENST00000474067 EIF3GO75821 320 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNX13-206ENST00000474067 TMEM75Q8N9X5 138 aa14.25□□□□□ -0.13
SNX13-206ENST00000474067 PCNPQ8WW12 178 aaKnown RBP14.25□□□□□ -0.13
SNX13-206ENST00000474067 EPDR1Q9UM22 224 aa14.25□□□□□ -0.13
SNX13-206ENST00000474067 HHLA3Q9XRX5 114 aa14.25□□□□□ -0.13
SNX13-206ENST00000474067 MRPS16Q9Y3D3 137 aaKnown RBP14.25□□□□□ -0.13
SNX13-206ENST00000474067 NACAE9PAV3 2078 aa14.25□□□□□ -0.13
SNX13-206ENST00000474067 VPS13DQ5THJ4 4388 aa14.24□□□□□ -0.13
SNX13-206ENST00000474067 M0R2P5 195 aa14.24□□□□□ -0.13
SNX13-206ENST00000474067 CIDEAO60543 219 aa14.24□□□□□ -0.13
SNX13-206ENST00000474067 GNG5P63218 68 aa14.24□□□□□ -0.13
SNX13-206ENST00000474067 FLI1Q01543 452 aaPredicted RBP14.24□□□□□ -0.13
SNX13-206ENST00000474067 MRPL23Q16540 153 aaKnown RBP14.24□□□□□ -0.13
SNX13-206ENST00000474067 SMUG1Q53HV7 270 aa14.24□□□□□ -0.13
SNX13-206ENST00000474067 C6orf223Q8N319 242 aa14.24□□□□□ -0.13
SNX13-206ENST00000474067 F6UZH7 168 aa14.23□□□□□ -0.13
SNX13-206ENST00000474067 IFNA7P01567 189 aa14.23□□□□□ -0.13
SNX13-206ENST00000474067 ORM1P02763 201 aa14.23□□□□□ -0.13
SNX13-206ENST00000474067 ZNF345Q14585 488 aa14.23□□□□□ -0.13
SNX13-206ENST00000474067 MDFICQ9P1T7 246 aa14.23□□□□□ -0.13
SNX13-206ENST00000474067 PSG8Q9UQ74 426 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms