RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 ARL14EPLP0DKL9 152 aa9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 CD300CQ08708 224 aa9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 DAZ2Q13117 558 aaKnown RBP9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 BTN1A1Q13410 526 aa9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 ANXA2RQ3ZCQ2 193 aa9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 EIF4E3Q8N5X7 224 aaKnown RBP9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 LINC00612Q8N6U2 182 aa9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 RAB24Q969Q5 203 aa9.14□□□□□ -0.95
SHROOM3-204ENST00000473602 hCG_2014768A0A024R1R8 64 aa9.13□□□□□ -0.95
SHROOM3-204ENST00000473602 PGPA6NDG6 321 aa9.13□□□□□ -0.95
SHROOM3-204ENST00000473602 RTL8CO15255 209 aa9.13□□□□□ -0.95
SHROOM3-204ENST00000473602 RPL7L1Q6DKI1 246 aaKnown RBP9.13□□□□□ -0.95
SHROOM3-204ENST00000473602 TMEM88Q6PEY1 159 aa9.13□□□□□ -0.95
SHROOM3-204ENST00000473602 POM121L12Q8N7R1 296 aa9.13□□□□□ -0.95
SHROOM3-204ENST00000473602 Q8TAT8 98 aa9.13□□□□□ -0.95
SHROOM3-204ENST00000473602 SH3BGRL3Q9H299 93 aa9.13□□□□□ -0.95
SHROOM3-204ENST00000473602 SERTM2A0A1B0GWG4 89 aa9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 F5H768 121 aa9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 RGS13O14921 159 aa9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 HMGB3O15347 200 aaKnown RBP9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 ARPC5O15511 151 aa9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 EIF3GO75821 320 aaKnown RBP eCLIP9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 CXorf1O96002 111 aa9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 PRR9Q5T870 116 aa9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 SUN5Q8TC36 379 aa9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 ST6GAL2Q96JF0 529 aa9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 HYLS1Q96M11 299 aa9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 ACTR3CQ9C0K3 210 aaPredicted RBP9.12□□□□□ -0.95
SHROOM3-204ENST00000473602 M0R2N4 97 aa9.11□□□□□ -0.95
SHROOM3-204ENST00000473602 GCHFRP30047 84 aa9.11□□□□□ -0.95
SHROOM3-204ENST00000473602 ZNF345Q14585 488 aa9.11□□□□□ -0.95
SHROOM3-204ENST00000473602 RNF212Q495C1 297 aa9.11□□□□□ -0.95
SHROOM3-204ENST00000473602 C11orf72Q8NBR9 251 aa9.11□□□□□ -0.95
SHROOM3-204ENST00000473602 C18orf15Q96N68 181 aa9.11□□□□□ -0.95
SHROOM3-204ENST00000473602 TMEM167BQ9NRX6 74 aa9.11□□□□□ -0.95
SHROOM3-204ENST00000473602 IGHV1OR15-1A0A075B7D0 117 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 GAGE12BA1L429 117 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 GAGE7O76087 117 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 GAGE12FP0CL80 117 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 GAGE12GP0CL81 117 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 GAGE12IP0CL82 117 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 TCL1AP56279 114 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 Q6AWC8 147 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 GOLT1AQ6ZVE7 132 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 AKAP14Q86UN6 197 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 UBE2DNLQ8IWF7 75 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 C5orf17Q8NAS9 161 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 GSN-AS1Q9NRJ2 163 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 RPH3ALQ9UNE2 315 aa9.1□□□□□ -0.95
SHROOM3-204ENST00000473602 CTXND1A0A1B0GTU2 59 aa9.09□□□□□ -0.95
SHROOM3-204ENST00000473602 K7EQM0 130 aa9.09□□□□□ -0.95
SHROOM3-204ENST00000473602 LCE2BO14633 110 aa9.09□□□□□ -0.95
SHROOM3-204ENST00000473602 FAM3BP58499 235 aaPredicted RBP9.09□□□□□ -0.95
SHROOM3-204ENST00000473602 AKR1C8PQ5T2L2 129 aa9.09□□□□□ -0.95
SHROOM3-204ENST00000473602 ARPC5LQ9BPX5 153 aa9.09□□□□□ -0.95
SHROOM3-204ENST00000473602 LRP1BQ9NZR2 4599 aa9.09□□□□□ -0.96
SHROOM3-204ENST00000473602 A0A1W2PRE2 83 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 HMSDA8MTL9 139 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 TCRAP04437 139 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 ZNF415Q09FC8 603 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 LGALS9BQ3B8N2 356 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 Q6ZTI0 123 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 ZNF575Q86XF7 245 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 KCNRGQ8N5I3 272 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 NDFIP1Q9BT67 221 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 CYTL1Q9NRR1 136 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 NACAE9PAV3 2078 aa9.08□□□□□ -0.96
SHROOM3-204ENST00000473602 TRGV2A0A075B6R0 118 aa9.07□□□□□ -0.96
SHROOM3-204ENST00000473602 FBLL1A6NHQ2 334 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-204ENST00000473602 H3BNG1 76 aa9.07□□□□□ -0.96
SHROOM3-204ENST00000473602 SPINK4O60575 86 aa9.07□□□□□ -0.96
SHROOM3-204ENST00000473602 GNG5P63218 68 aa9.07□□□□□ -0.96
SHROOM3-204ENST00000473602 FAM159AQ6UWV7 190 aa9.07□□□□□ -0.96
SHROOM3-204ENST00000473602 TREM1Q9NP99 234 aa9.07□□□□□ -0.96
SHROOM3-204ENST00000473602 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
SHROOM3-204ENST00000473602 TRGV11A0A075B6L2 103 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 TRGV1A0A0A0MS02 117 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 TRAV8-1A0A0A6YYK1 113 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 TRAV21A0A0B4J279 112 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 A0A0D9SG52 128 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 GGTLC3B5MD39 225 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 SMLR1H3BR10 107 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 NUDT3O95989 172 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 SUMO1P63165 101 aaKnown RBP9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 OR5I1Q13606 314 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 TDRG1Q3Y452 100 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 Q6ZQT7 251 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 SSX7Q7RTT5 188 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 IQCF2Q8IXL9 164 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 CYB561D1Q8N8Q1 229 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 ATG101Q9BSB4 218 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 TMPRSS5Q9H3S3 457 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 TP53TG3Q9ULZ0 132 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 EPDR1Q9UM22 224 aa9.06□□□□□ -0.96
SHROOM3-204ENST00000473602 HOXA5P20719 270 aa9.05□□□□□ -0.96
SHROOM3-204ENST00000473602 S100A1P23297 94 aa9.05□□□□□ -0.96
SHROOM3-204ENST00000473602 MUC21Q5SSG8 566 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms