RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ARL2-SNX15V9GYD0 113 aa10.18□□□□□ -0.78
BRCA1-211ENST00000472490 A0A1B0GVG6 124 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 FAM74A7A6NL05 159 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 F6UZH7 168 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 RGS13O14921 159 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 ZNF324O75467 553 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-211ENST00000472490 UBE2G2P60604 165 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 GNG5P63218 68 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 CD300CQ08708 224 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 C12orf74Q32Q52 190 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 Q6ZTC4 211 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 C9orf62Q8N4C0 152 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 CYB561D1Q8N8Q1 229 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 ZNF680Q8NEM1 530 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 RNASE8Q8TDE3 154 aaKnown RBP10.17□□□□□ -0.78
BRCA1-211ENST00000472490 C2CD4CQ8TF44 421 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 HIST1H2BAQ96A08 127 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 LINC00467Q9BRT7 94 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 CELA1Q9UNI1 258 aa10.17□□□□□ -0.78
BRCA1-211ENST00000472490 AZU1P20160 251 aa10.16□□□□□ -0.78
BRCA1-211ENST00000472490 TCTAP57738 103 aa10.16□□□□□ -0.78
BRCA1-211ENST00000472490 DAD1P61803 113 aa10.16□□□□□ -0.78
BRCA1-211ENST00000472490 TMEM75Q8N9X5 138 aa10.16□□□□□ -0.78
BRCA1-211ENST00000472490 TREM1Q9NP99 234 aa10.16□□□□□ -0.78
BRCA1-211ENST00000472490 DEFB131BA0A096LNP1 70 aa10.15□□□□□ -0.78
BRCA1-211ENST00000472490 CBY3A6NI87 242 aa10.15□□□□□ -0.78
BRCA1-211ENST00000472490 SNURFLB1AK76 121 aa10.15□□□□□ -0.78
BRCA1-211ENST00000472490 PRM2P04554 102 aa10.15□□□□□ -0.78
BRCA1-211ENST00000472490 SULT1A2P50226 295 aa10.15□□□□□ -0.78
BRCA1-211ENST00000472490 ANXA2RQ3ZCQ2 193 aa10.15□□□□□ -0.78
BRCA1-211ENST00000472490 SAPCD1Q5SSQ6 148 aa10.15□□□□□ -0.78
BRCA1-211ENST00000472490 CST9LP1Q5W188 147 aa10.15□□□□□ -0.78
BRCA1-211ENST00000472490 EIF4E3Q8N5X7 224 aaKnown RBP10.15□□□□□ -0.78
BRCA1-211ENST00000472490 TRAV8-1A0A0A6YYK1 113 aa10.14□□□□□ -0.79
BRCA1-211ENST00000472490 FLI1Q01543 452 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-211ENST00000472490 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
BRCA1-211ENST00000472490 Q6AWC8 147 aa10.14□□□□□ -0.79
BRCA1-211ENST00000472490 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
BRCA1-211ENST00000472490 ZNF767PQ75MW2 155 aa10.14□□□□□ -0.79
BRCA1-211ENST00000472490 PSG8Q9UQ74 426 aa10.14□□□□□ -0.79
BRCA1-211ENST00000472490 IGHV1OR15-1A0A075B7D0 117 aa10.13□□□□□ -0.79
BRCA1-211ENST00000472490 TRAV1-1A0A0B4J248 108 aa10.13□□□□□ -0.79
BRCA1-211ENST00000472490 TRAV21A0A0B4J279 112 aa10.13□□□□□ -0.79
BRCA1-211ENST00000472490 PLAC8L1A1L4L8 177 aa10.13□□□□□ -0.79
BRCA1-211ENST00000472490 PEX7O00628 323 aa10.13□□□□□ -0.79
BRCA1-211ENST00000472490 IBA57Q5T440 356 aaKnown RBP10.13□□□□□ -0.79
BRCA1-211ENST00000472490 PRR9Q5T870 116 aa10.13□□□□□ -0.79
BRCA1-211ENST00000472490 NOP10Q9NPE3 64 aaKnown RBP10.13□□□□□ -0.79
BRCA1-211ENST00000472490 A0A1B0GV50 99 aa10.12□□□□□ -0.79
BRCA1-211ENST00000472490 IGLL5B9A064 214 aa10.12□□□□□ -0.79
BRCA1-211ENST00000472490 PAGE4O60829 102 aa10.12□□□□□ -0.79
BRCA1-211ENST00000472490 DEFB130BP0DP73 79 aa10.12□□□□□ -0.79
BRCA1-211ENST00000472490 DEFB130AP0DP74 79 aa10.12□□□□□ -0.79
BRCA1-211ENST00000472490 DAZ2Q13117 558 aaKnown RBP10.12□□□□□ -0.79
BRCA1-211ENST00000472490 PRNTQ86SH4 94 aa10.12□□□□□ -0.79
BRCA1-211ENST00000472490 FAM210BQ96KR6 192 aa10.12□□□□□ -0.79
BRCA1-211ENST00000472490 SGK494Q96LW2 274 aa10.12□□□□□ -0.79
BRCA1-211ENST00000472490 MANBALQ9NQG1 85 aa10.12□□□□□ -0.79
BRCA1-211ENST00000472490 IGLV2-11P01706 119 aa10.11□□□□□ -0.79
BRCA1-211ENST00000472490 UBE2G1P62253 170 aa10.11□□□□□ -0.79
BRCA1-211ENST00000472490 SMUG1Q53HV7 270 aa10.11□□□□□ -0.79
BRCA1-211ENST00000472490 FMC1Q96HJ9 113 aa10.11□□□□□ -0.79
BRCA1-211ENST00000472490 ZFP30Q9Y2G7 519 aa10.11□□□□□ -0.79
BRCA1-211ENST00000472490 TRGV11A0A075B6L2 103 aa10.1□□□□□ -0.79
BRCA1-211ENST00000472490 LCE6AA0A183 80 aa10.1□□□□□ -0.79
BRCA1-211ENST00000472490 ZNF415Q09FC8 603 aa10.1□□□□□ -0.79
BRCA1-211ENST00000472490 TDRG1Q3Y452 100 aa10.1□□□□□ -0.79
BRCA1-211ENST00000472490 TVP23CQ96ET8 276 aa10.1□□□□□ -0.79
BRCA1-211ENST00000472490 KCNS1Q96KK3 526 aa10.1□□□□□ -0.79
BRCA1-211ENST00000472490 TXNDC17Q9BRA2 123 aa10.1□□□□□ -0.79
BRCA1-211ENST00000472490 GSN-AS1Q9NRJ2 163 aa10.1□□□□□ -0.79
BRCA1-211ENST00000472490 GNG13Q9P2W3 67 aa10.1□□□□□ -0.79
BRCA1-211ENST00000472490 TRAV34A0A0B4J273 112 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 IFNA1P01562 189 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 ATP5G1P05496 136 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 S100A9P06702 114 aaKnown RBP10.09□□□□□ -0.79
BRCA1-211ENST00000472490 PFN1P07737 140 aaKnown RBP10.09□□□□□ -0.79
BRCA1-211ENST00000472490 HTN3P15516 51 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 ATP5G3P48201 142 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 TCL1AP56279 114 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 MUC21Q5SSG8 566 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 C11orf72Q8NBR9 251 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 LINC00479Q96M42 142 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 KLF12Q9Y4X4 402 aa10.09□□□□□ -0.79
BRCA1-211ENST00000472490 IGHV4-4A0A075B6R2 117 aa10.08□□□□□ -0.8
BRCA1-211ENST00000472490 GCGP01275 180 aa10.08□□□□□ -0.8
BRCA1-211ENST00000472490 TAGLN2P37802 199 aaKnown RBP10.08□□□□□ -0.8
BRCA1-211ENST00000472490 AKR1C3P42330 323 aa10.08□□□□□ -0.8
BRCA1-211ENST00000472490 NKX2-5P52952 324 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-211ENST00000472490 LGALS9BQ3B8N2 356 aa10.08□□□□□ -0.8
BRCA1-211ENST00000472490 Q86TA4 180 aa10.08□□□□□ -0.8
BRCA1-211ENST00000472490 SDF2L1Q9HCN8 221 aa10.08□□□□□ -0.8
BRCA1-211ENST00000472490 TRBV6-1A0A0K0K1D8 114 aa10.07□□□□□ -0.8
BRCA1-211ENST00000472490 BLOC1S1P78537 153 aa10.07□□□□□ -0.8
BRCA1-211ENST00000472490 TMEM183BQ1AE95 376 aa10.07□□□□□ -0.8
BRCA1-211ENST00000472490 ALKAL2Q6UX46 152 aa10.07□□□□□ -0.8
BRCA1-211ENST00000472490 Q6ZQT7 251 aa10.07□□□□□ -0.8
BRCA1-211ENST00000472490 LINC00612Q8N6U2 182 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms