RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 KLK6Q92876 244 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 COX14Q96I36 57 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 DHRS9Q9BPW9 319 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 SIKE1Q9BRV8 207 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 XPNPEP1Q9NQW7 623 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 CDC42SE1Q9NRR8 79 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 UQCC1Q9NVA1 299 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 TVP23BQ9NYZ1 205 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 IL36BQ9NZH7 164 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 NDUFA12Q9UI09 145 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 MYH4Q9Y623 1939 aa-0.17□□□□□ -2.44
UBXN4-207ENST00000471246 MYH2Q9UKX2 1941 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 OR2T8A6NH00 312 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 OR4C45A6NMZ5 311 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 SMLR1H3BR10 107 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 K7EP34 96 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 M0QZ92 97 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 CCL25O15444 150 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 UBL3O95164 117 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 REG1AP05451 166 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 SCTP09683 121 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 FAM228BP0C875 321 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 MIFP14174 115 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 KCNE1P15382 129 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 ARPP19P56211 112 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 PSG9Q00887 426 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 FABP9Q0Z7S8 132 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 MPV17LQ2QL34 196 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 DEFB133Q30KQ1 61 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 C12orf74Q32Q52 190 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 NCMAPQ5T1S8 102 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 SPAG11AQ6PDA7 123 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 HAGHLQ6PII5 290 aaPredicted RBP-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 TEX261Q6UWH6 196 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 LRRN1Q6UXK5 716 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 SOSTDC1Q6X4U4 206 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 FAM19A5Q7Z5A7 132 aaPredicted RBP-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 DEFB108BQ8NET1 73 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 OR2T4Q8NH00 348 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 SFT2D1Q8WV19 159 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 EEF1AKMT1Q8WVE0 214 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 RASSF5Q8WWW0 418 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 ROPN1LQ96C74 230 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 TCEAL4Q96EI5 215 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 OR4C12Q96R67 309 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 EFCAB1Q9HAE3 211 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 TAS2R4Q9NYW5 299 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 CKLFQ9UBR5 152 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 U3KQ87 197 aa-0.18□□□□□ -2.44
UBXN4-207ENST00000471246 ANKRD36A6QL64 1941 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 SPTY2D1-AS1A0A0U1RR47 76 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 LINC00854A0A1B0GVQ3 168 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 KLF7O75840 302 aaPredicted RBP-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 IGLV1-51P01701 117 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 HLA-DRAP01903 254 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 S100A9P06702 114 aaKnown RBP-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 BAALC-AS2P0C853 105 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 UGT2B7P16662 529 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 PDE6GP18545 87 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 SSR2P43308 183 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 SNRPD2P62316 118 aaKnown RBP-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 CCL20P78556 96 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 RHOGP84095 191 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 PMS2P3Q13401 168 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 RNASE10Q5GAN6 216 aaKnown RBP-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 C1orf137Q5JT78 98 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 SPANXN5Q5MJ07 72 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 SDHAF4Q5VUM1 108 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 GLT8D1Q68CQ7 371 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 DPPA3Q6W0C5 159 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 CD302Q8IX05 232 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 PFN4Q8NHR9 129 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 YPEL2Q96QA6 119 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 PRRT1Q99946 306 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 DCUN1D5Q9BTE7 237 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 TMEM147Q9BVK8 224 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 HDHD2Q9H0R4 259 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 TLNRD1Q9H1K6 362 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 BOLA2Q9H3K6 86 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 SPACA1Q9HBV2 294 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 IMP3Q9NV31 184 aaKnown RBP-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 FKBP14Q9NWM8 211 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 RASL12Q9NYN1 266 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 UBAP1Q9NZ09 502 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 CRIPTQ9P021 101 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 DKKL1Q9UK85 242 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 POLR1DQ9Y2S0 133 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 UBE2D4Q9Y2X8 147 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 MYH7P12883 1935 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 MYH6P13533 1939 aa-0.19□□□□□ -2.44
UBXN4-207ENST00000471246 TRBV20OR9-2A0A075B6H5 130 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 TRAV12-1A0A0B4J245 112 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 FAM236AA0A1B0GUQ0 79 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 FAM236BA0A1B0GV22 79 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 A0A1B0GW64 132 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 ODAMA1E959 279 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 CCDC160A6NGH7 325 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 ZNF736B4DX44 427 aaPredicted RBP-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 DISC1C4P0D8 188 aa-0.2□□□□□ -2.44
UBXN4-207ENST00000471246 GOLGA8KD6RF30 607 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms