RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 TMSB15BA0A087X1C1 80 aa14.19□□□□□ -0.14
SMC4-209ENST00000468653 EBLN2Q6P2I7 272 aa14.19□□□□□ -0.14
SMC4-209ENST00000468653 SIGLEC8Q9NYZ4 499 aa14.19□□□□□ -0.14
SMC4-209ENST00000468653 WNK1Q9H4A3 2382 aa14.19□□□□□ -0.14
SMC4-209ENST00000468653 ORM1P02763 201 aa14.19□□□□□ -0.14
SMC4-209ENST00000468653 CD33P20138 364 aa14.19□□□□□ -0.14
SMC4-209ENST00000468653 RPS20P60866 119 aaKnown RBP14.19□□□□□ -0.14
SMC4-209ENST00000468653 FABP9Q0Z7S8 132 aa14.19□□□□□ -0.14
SMC4-209ENST00000468653 ACTL10Q5JWF8 245 aa14.19□□□□□ -0.14
SMC4-209ENST00000468653 FRZBQ92765 325 aa14.19□□□□□ -0.14
SMC4-209ENST00000468653 TRAV25A0A0B4J276 109 aa14.18□□□□□ -0.14
SMC4-209ENST00000468653 J3KRW8 73 aa14.18□□□□□ -0.14
SMC4-209ENST00000468653 FRMD6-AS1P0C7T7 363 aa14.18□□□□□ -0.14
SMC4-209ENST00000468653 COX19Q49B96 90 aa14.18□□□□□ -0.14
SMC4-209ENST00000468653 GDF5OSQ5U4N7 250 aa14.18□□□□□ -0.14
SMC4-209ENST00000468653 WDR73Q6P4I2 378 aa14.18□□□□□ -0.14
SMC4-209ENST00000468653 TRBV7-9A0A0J9YWB2 115 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 A0A0J9YX75 114 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 S100A6P06703 90 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 RAB4BP61018 213 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 ZFAND2AQ8N6M9 145 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 GNB1LQ9BYB4 327 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 OR4C46A6NHA9 309 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 SNURFLB1AK76 121 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 PHOX2AO14813 284 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 PF4P02776 101 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 GPX1P07203 203 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 TRGC1P0CF51 173 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 FOXA3P55318 350 aaPredicted RBP14.17□□□□□ -0.14
SMC4-209ENST00000468653 FAM19A4Q96LR4 140 aa14.17□□□□□ -0.14
SMC4-209ENST00000468653 SPAG8Q99932 426 aaPredicted RBP14.17□□□□□ -0.14
SMC4-209ENST00000468653 SAV1Q9H4B6 383 aaPredicted RBP14.17□□□□□ -0.14
SMC4-209ENST00000468653 HIST1H2BKO60814 126 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 SAP30O75446 220 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 HIST1H2BJP06899 126 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 HIST1H2BOP23527 126 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 HIST1H2BBP33778 126 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 HIST1H2BDP58876 126 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 DEFB131AP59861 70 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 HIST1H2BCP62807 126 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 HIST2H2BEQ16778 126 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.16□□□□□ -0.14
SMC4-209ENST00000468653 RASL11AQ6T310 242 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 FOXI2Q6ZQN5 318 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 ATP5L2Q7Z4Y8 100 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 HIST1H2BHQ93079 126 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 HIST1H2BNQ99877 126 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 HIST1H2BMQ99879 126 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 TPPP3Q9BW30 176 aa14.16□□□□□ -0.14
SMC4-209ENST00000468653 DUSP14O95147 198 aaKnown RBP14.15□□□□□ -0.14
SMC4-209ENST00000468653 CRISP2P16562 243 aa14.15□□□□□ -0.14
SMC4-209ENST00000468653 LINC01559Q495D7 138 aa14.15□□□□□ -0.14
SMC4-209ENST00000468653 PRR9Q5T870 116 aa14.15□□□□□ -0.14
SMC4-209ENST00000468653 Q6AWC8 147 aa14.15□□□□□ -0.14
SMC4-209ENST00000468653 MRPL18Q9H0U6 180 aaKnown RBP14.15□□□□□ -0.14
SMC4-209ENST00000468653 LOC105371267A0A1B0GV96 52 aa14.14□□□□□ -0.15
SMC4-209ENST00000468653 MT-ND6P03923 174 aa14.14□□□□□ -0.15
SMC4-209ENST00000468653 RNASE4P34096 147 aaKnown RBP14.14□□□□□ -0.15
SMC4-209ENST00000468653 TMEM136Q6ZRR5 245 aa14.14□□□□□ -0.15
SMC4-209ENST00000468653 IGKV3-20P01619 116 aa14.14□□□□□ -0.15
SMC4-209ENST00000468653 CAMPP49913 170 aa14.14□□□□□ -0.15
SMC4-209ENST00000468653 HBBP68871 147 aa14.14□□□□□ -0.15
SMC4-209ENST00000468653 BORCS7Q96B45 105 aa14.14□□□□□ -0.15
SMC4-209ENST00000468653 TRAV21A0A0B4J279 112 aa14.13□□□□□ -0.15
SMC4-209ENST00000468653 HLA-DQA1P01909 254 aa14.13□□□□□ -0.15
SMC4-209ENST00000468653 LEPP41159 167 aa14.13□□□□□ -0.15
SMC4-209ENST00000468653 ODF3Q96PU9 254 aa14.13□□□□□ -0.15
SMC4-209ENST00000468653 C11orf21Q9P2W6 132 aa14.13□□□□□ -0.15
SMC4-209ENST00000468653 JMJD1CQ15652 2540 aa14.12□□□□□ -0.15
SMC4-209ENST00000468653 A0A1B0GUT8 65 aa14.12□□□□□ -0.15
SMC4-209ENST00000468653 A0A1B0GXF2 115 aa14.12□□□□□ -0.15
SMC4-209ENST00000468653 GRIFINA4D1Z8 144 aa14.12□□□□□ -0.15
SMC4-209ENST00000468653 NDUFA6P56556 154 aa14.12□□□□□ -0.15
SMC4-209ENST00000468653 APRG1Q8IVJ8 170 aa14.12□□□□□ -0.15
SMC4-209ENST00000468653 MAP6D1Q9H9H5 199 aa14.12□□□□□ -0.15
SMC4-209ENST00000468653 ZNF256Q9Y2P7 627 aaPredicted RBP14.12□□□□□ -0.15
SMC4-209ENST00000468653 SORL1Q92673 2214 aa14.12□□□□□ -0.15
SMC4-209ENST00000468653 IGKV3D-20A0A0C4DH25 116 aa14.11□□□□□ -0.15
SMC4-209ENST00000468653 KNCNA6PVL3 124 aa14.11□□□□□ -0.15
SMC4-209ENST00000468653 RIGQ13278 110 aa14.11□□□□□ -0.15
SMC4-209ENST00000468653 LYZL1Q6UWQ5 148 aa14.11□□□□□ -0.15
SMC4-209ENST00000468653 Q6ZQT7 251 aa14.11□□□□□ -0.15
SMC4-209ENST00000468653 FER1L6-AS1Q8NA97 138 aa14.11□□□□□ -0.15
SMC4-209ENST00000468653 ARMS2P0C7Q2 107 aa14.11□□□□□ -0.15
SMC4-209ENST00000468653 SNRPEP62304 92 aaKnown RBP14.11□□□□□ -0.15
SMC4-209ENST00000468653 NAGKQ9UJ70 344 aa14.11□□□□□ -0.15
SMC4-209ENST00000468653 KLLNB2CW77 178 aa14.1□□□□□ -0.15
SMC4-209ENST00000468653 TSPOP30536 169 aa14.1□□□□□ -0.15
SMC4-209ENST00000468653 KIR3DS1Q14943 382 aa14.1□□□□□ -0.15
SMC4-209ENST00000468653 LINC00482Q8N8I6 264 aa14.1□□□□□ -0.15
SMC4-209ENST00000468653 CITED1Q99966 193 aa14.1□□□□□ -0.15
SMC4-209ENST00000468653 APCSP02743 223 aa14.09□□□□□ -0.15
SMC4-209ENST00000468653 ZNF575Q86XF7 245 aa14.09□□□□□ -0.15
SMC4-209ENST00000468653 IGLV1-51P01701 117 aa14.09□□□□□ -0.15
SMC4-209ENST00000468653 IGLC6P0CF74 106 aa14.09□□□□□ -0.15
SMC4-209ENST00000468653 HLA-DRB4P13762 266 aa14.09□□□□□ -0.15
SMC4-209ENST00000468653 HLA-DRB4X5D2U9 266 aa14.09□□□□□ -0.15
SMC4-209ENST00000468653 NIPBLQ6KC79 2804 aaeCLIP14.08□□□□□ -0.168e-8■■■■■ 47
SMC4-209ENST00000468653 A0A1B0GW15 77 aa14.08□□□□□ -0.16
SMC4-209ENST00000468653 C5orf52A6NGY3 159 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms