RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 LINC00467Q9BRT7 94 aa8.09□□□□□ -1.11
CDHR3-205ENST00000468143 TRGV2A0A075B6R0 118 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 TRGV1A0A0A0MS02 117 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 BORCS7-ASMTA0A0B4J1R7 106 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 ARPC5O15511 151 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 MBP02144 154 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 GCHFRP30047 84 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 SERF2P84101 59 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 SSX7Q7RTT5 188 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 ZNF680Q8NEM1 530 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 ATG101Q9BSB4 218 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 ACTR3CQ9C0K3 210 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-205ENST00000468143 TMPRSS5Q9H3S3 457 aa8.08□□□□□ -1.12
CDHR3-205ENST00000468143 TRAV26-1A0A087WT03 109 aa8.07□□□□□ -1.12
CDHR3-205ENST00000468143 TRAV8-1A0A0A6YYK1 113 aa8.07□□□□□ -1.12
CDHR3-205ENST00000468143 TRBV7-9A0A0J9YWB2 115 aa8.07□□□□□ -1.12
CDHR3-205ENST00000468143 RNF212Q495C1 297 aa8.07□□□□□ -1.12
CDHR3-205ENST00000468143 IQCF2Q8IXL9 164 aa8.07□□□□□ -1.12
CDHR3-205ENST00000468143 GNPNAT1Q96EK6 184 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-205ENST00000468143 TVP23CQ96ET8 276 aa8.07□□□□□ -1.12
CDHR3-205ENST00000468143 ARPC5LQ9BPX5 153 aa8.07□□□□□ -1.12
CDHR3-205ENST00000468143 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
CDHR3-205ENST00000468143 F6UZH7 168 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 SPINK4O60575 86 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 CXorf1O96002 111 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 IGHV3-53P01767 116 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 TCL1AP56279 114 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 SUMO1P63165 101 aaKnown RBP8.06□□□□□ -1.12
CDHR3-205ENST00000468143 ZNF726P1Q15940 193 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 ST6GAL2Q96JF0 529 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 KRTAP17-1Q9BYP8 105 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 CYTL1Q9NRR1 136 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 MDFICQ9P1T7 246 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 NAGKQ9UJ70 344 aa8.06□□□□□ -1.12
CDHR3-205ENST00000468143 KMT2AQ03164 3969 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 GNRH2O43555 120 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 TMEM183BQ1AE95 376 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 IBA57Q5T440 356 aaKnown RBP8.05□□□□□ -1.12
CDHR3-205ENST00000468143 Q6AWC8 147 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 FAM159AQ6UWV7 190 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 TMEM183AQ8IXX5 376 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 SUN5Q8TC36 379 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 TMED6Q8WW62 240 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 TREM1Q9NP99 234 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 LINC00588Q9Y4M8 146 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 LENEPQ9Y5L5 61 aa8.05□□□□□ -1.12
CDHR3-205ENST00000468143 TAAR5O14804 337 aa8.04□□□□□ -1.12
CDHR3-205ENST00000468143 TCRAP04437 139 aa8.04□□□□□ -1.12
CDHR3-205ENST00000468143 FGF8P55075 233 aaPredicted RBP8.04□□□□□ -1.12
CDHR3-205ENST00000468143 CCL18P55774 89 aa8.04□□□□□ -1.12
CDHR3-205ENST00000468143 ZNF415Q09FC8 603 aa8.04□□□□□ -1.12
CDHR3-205ENST00000468143 LGALS9BQ3B8N2 356 aa8.04□□□□□ -1.12
CDHR3-205ENST00000468143 ARL6IP6Q8N6S5 226 aa8.04□□□□□ -1.12
CDHR3-205ENST00000468143 TMEM167BQ9NRX6 74 aa8.04□□□□□ -1.12
CDHR3-205ENST00000468143 EPDR1Q9UM22 224 aa8.04□□□□□ -1.12
CDHR3-205ENST00000468143 GGTLC3B5MD39 225 aa8.03□□□□□ -1.12
CDHR3-205ENST00000468143 RTL8CO15255 209 aa8.03□□□□□ -1.12
CDHR3-205ENST00000468143 UBE2G2P60604 165 aa8.03□□□□□ -1.12
CDHR3-205ENST00000468143 AKR1C8PQ5T2L2 129 aa8.03□□□□□ -1.12
CDHR3-205ENST00000468143 Q6ZR54 194 aa8.03□□□□□ -1.12
CDHR3-205ENST00000468143 C5orf17Q8NAS9 161 aa8.03□□□□□ -1.12
CDHR3-205ENST00000468143 OR11H4Q8NGC9 324 aa8.03□□□□□ -1.12
CDHR3-205ENST00000468143 VSIG2Q96IQ7 327 aa8.03□□□□□ -1.12
CDHR3-205ENST00000468143 C8orf49Q96NF6 230 aa8.03□□□□□ -1.12
CDHR3-205ENST00000468143 PSG8Q9UQ74 426 aa8.03□□□□□ -1.12
CDHR3-205ENST00000468143 TRAV21A0A0B4J279 112 aa8.02□□□□□ -1.13
CDHR3-205ENST00000468143 CTXND1A0A1B0GTU2 59 aa8.02□□□□□ -1.13
CDHR3-205ENST00000468143 ZNF80P51504 273 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-205ENST00000468143 ESRGQ1W209 222 aa8.02□□□□□ -1.13
CDHR3-205ENST00000468143 PRNTQ86SH4 94 aa8.02□□□□□ -1.13
CDHR3-205ENST00000468143 ZNRF2Q8NHG8 242 aa8.02□□□□□ -1.13
CDHR3-205ENST00000468143 LINC00479Q96M42 142 aa8.02□□□□□ -1.13
CDHR3-205ENST00000468143 C18orf15Q96N68 181 aa8.02□□□□□ -1.13
CDHR3-205ENST00000468143 DNAH10Q8IVF4 4471 aa8.02□□□□□ -1.13
CDHR3-205ENST00000468143 TRGV11A0A075B6L2 103 aa8.01□□□□□ -1.13
CDHR3-205ENST00000468143 TRAV34A0A0B4J273 112 aa8.01□□□□□ -1.13
CDHR3-205ENST00000468143 SERTM2A0A1B0GWG4 89 aa8.01□□□□□ -1.13
CDHR3-205ENST00000468143 PRSS29PA6NIE9 313 aa8.01□□□□□ -1.13
CDHR3-205ENST00000468143 K7EQM0 130 aa8.01□□□□□ -1.13
CDHR3-205ENST00000468143 IGLV2-11P01706 119 aa8.01□□□□□ -1.13
CDHR3-205ENST00000468143 SFTA3P0C7M3 94 aa8.01□□□□□ -1.13
CDHR3-205ENST00000468143 FAM3BP58499 235 aaPredicted RBP8.01□□□□□ -1.13
CDHR3-205ENST00000468143 KCNRGQ8N5I3 272 aa8.01□□□□□ -1.13
CDHR3-205ENST00000468143 NDFIP1Q9BT67 221 aa8.01□□□□□ -1.13
CDHR3-205ENST00000468143 A0A096LPF7 62 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 IGHV3-16A0A0C4DH30 117 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 A0A1W2PRE2 83 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 H3BNG1 76 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 PAX4O43316 350 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 IFNA7P01567 189 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 TYMSP04818 313 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 FHITP49789 147 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 FLI1Q01543 452 aaPredicted RBP8□□□□□ -1.13
CDHR3-205ENST00000468143 FHL2Q14192 279 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 TDRG1Q3Y452 100 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 LINC00336Q6ZUF6 198 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 CYB561D1Q8N8Q1 229 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 ZNF479Q96JC4 524 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 SPXQ9BT56 116 aa8□□□□□ -1.13
CDHR3-205ENST00000468143 Q9H8V8 135 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms