RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 PDE6DO43924 150 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 CRISP2P16562 243 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 LINC00310P59036 64 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 DEFB135Q30KP9 77 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 SAPCD1Q5SSQ6 148 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF493Q6ZR52 646 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 EXOC3-AS1Q8N2X6 119 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 TMEM75Q8N9X5 138 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 FMC1Q96HJ9 113 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 C20orf173Q96LM9 149 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 RARRES2Q99969 163 aa5.05□□□□□ -1.6
CLDN4-204ENST00000466411 FAM74A7A6NL05 159 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 M0R3E3 92 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 TCRAP04437 139 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 GPX1P07203 203 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 UBE2G1P62253 170 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF726P1Q15940 193 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 GDF5OSQ5U4N7 250 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 AMTNQ6UX39 209 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF705AQ6ZN79 300 aaPredicted RBP5.04□□□□□ -1.6
CLDN4-204ENST00000466411 CCDC28AQ8IWP9 274 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF680Q8NEM1 530 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 SMIM12Q96EX1 92 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 PYGO2Q9BRQ0 406 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF492Q9P255 531 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 EPDR1Q9UM22 224 aa5.04□□□□□ -1.6
CLDN4-204ENST00000466411 TRBV6-1A0A0K0K1D8 114 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF705FA8MVS1 300 aaPredicted RBP5.03□□□□□ -1.6
CLDN4-204ENST00000466411 KLLNB2CW77 178 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 F6UB75 175 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 H3BTX0 84 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 PEX7O00628 323 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF705DP0CH99 300 aaPredicted RBP5.03□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF705BP0CI00 300 aaPredicted RBP5.03□□□□□ -1.6
CLDN4-204ENST00000466411 CT45A10P0DMU9 189 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 TAS2R60P59551 318 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 RAB14P61106 215 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 FLI1Q01543 452 aaPredicted RBP5.03□□□□□ -1.6
CLDN4-204ENST00000466411 MEF2BQ02080 365 aaPredicted RBP5.03□□□□□ -1.6
CLDN4-204ENST00000466411 CD300CQ08708 224 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 ZNF124Q15973 351 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 RRN3P1Q2M238 152 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 CST9LP1Q5W188 147 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 TEX261Q6UWH6 196 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 ALKAL2Q6UX46 152 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 CSNK1G2-AS1Q8NCQ2 148 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 OR11H2Q8NH07 326 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 C16orf74Q96GX8 76 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 KCNS1Q96KK3 526 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 OVOL2Q9BRP0 275 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 LINC00467Q9BRT7 94 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 SLC35B3Q9H1N7 401 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 SMDT1Q9H4I9 107 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 BIN3Q9NQY0 253 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 XCL2Q9UBD3 114 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 ZFP30Q9Y2G7 519 aa5.03□□□□□ -1.6
CLDN4-204ENST00000466411 AGRNO00468 2067 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 C7orf71A4D174 169 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 GGTLC3B5MD39 225 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 C11orf94C9JXX5 98 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 IGKV3-20P01619 116 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 BCL2P10415 239 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 AKR1C3P42330 323 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 FGF8P55075 233 aaPredicted RBP5.02□□□□□ -1.61
CLDN4-204ENST00000466411 SPINK13Q1W4C9 94 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 IGFL4Q6B9Z1 124 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 GOLT1AQ6ZVE7 132 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 SSX7Q7RTT5 188 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 LYPD6BQ8NI32 183 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 TMEM263Q8WUH6 116 aaKnown RBP5.02□□□□□ -1.61
CLDN4-204ENST00000466411 FAM19A4Q96LR4 140 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 AGPAT4-IT1Q9H0P7 198 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 VAX2Q9UIW0 290 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 KLF12Q9Y4X4 402 aa5.02□□□□□ -1.61
CLDN4-204ENST00000466411 TRGV11A0A075B6L2 103 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 IGKV2-40A0A087WW87 121 aaPredicted RBP5.01□□□□□ -1.61
CLDN4-204ENST00000466411 TRAV21A0A0B4J279 112 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 LYRM9A8MSI8 78 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 TMEM250H0YL14 139 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 M0R2Z0 102 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 PAGE4O60829 102 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 IGKV2D-40P01614 121 aaPredicted RBP5.01□□□□□ -1.61
CLDN4-204ENST00000466411 SNRPCP09234 159 aaKnown RBP5.01□□□□□ -1.61
CLDN4-204ENST00000466411 HLA-DMBP28068 263 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 NKX2-5P52952 324 aaPredicted RBP5.01□□□□□ -1.61
CLDN4-204ENST00000466411 UBE2G2P60604 165 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 SMUG1Q53HV7 270 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 GFI1BQ5VTD9 330 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 Q6AWC8 147 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 FAM159AQ6UWV7 190 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 ZNF767PQ75MW2 155 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 LINC01587Q99440 93 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 NDUFAF3Q9BU61 184 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 TMPRSS5Q9H3S3 457 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 TREM1Q9NP99 234 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 GNG13Q9P2W3 67 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 RPH3ALQ9UNE2 315 aa5.01□□□□□ -1.61
CLDN4-204ENST00000466411 YTHDF2Q9Y5A9 579 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms