RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 CMTM2Q8TAZ6 248 aa12.95□□□□□ -0.34
COL9A2-205ENST00000461118 SNURFLB1AK76 121 aa12.94□□□□□ -0.34
COL9A2-205ENST00000461118 ARPC5O15511 151 aa12.94□□□□□ -0.34
COL9A2-205ENST00000461118 PRR9Q5T870 116 aa12.94□□□□□ -0.34
COL9A2-205ENST00000461118 TMEM88Q6PEY1 159 aa12.94□□□□□ -0.34
COL9A2-205ENST00000461118 EIF4E3Q8N5X7 224 aaKnown RBP12.94□□□□□ -0.34
COL9A2-205ENST00000461118 POM121L12Q8N7R1 296 aa12.94□□□□□ -0.34
COL9A2-205ENST00000461118 Q8TAT8 98 aa12.94□□□□□ -0.34
COL9A2-205ENST00000461118 HYLS1Q96M11 299 aa12.94□□□□□ -0.34
COL9A2-205ENST00000461118 ACTR3CQ9C0K3 210 aaPredicted RBP12.94□□□□□ -0.34
COL9A2-205ENST00000461118 GCHFRP30047 84 aa12.93□□□□□ -0.34
COL9A2-205ENST00000461118 C11orf72Q8NBR9 251 aa12.93□□□□□ -0.34
COL9A2-205ENST00000461118 ZNF680Q8NEM1 530 aa12.93□□□□□ -0.34
COL9A2-205ENST00000461118 HSPG2P98160 4391 aa12.93□□□□□ -0.34
COL9A2-205ENST00000461118 NACAE9PAV3 2078 aa12.92□□□□□ -0.34
COL9A2-205ENST00000461118 CXorf1O96002 111 aa12.92□□□□□ -0.34
COL9A2-205ENST00000461118 C15orf53Q8NAA6 179 aa12.92□□□□□ -0.34
COL9A2-205ENST00000461118 ST6GAL2Q96JF0 529 aa12.92□□□□□ -0.34
COL9A2-205ENST00000461118 CYTL1Q9NRR1 136 aa12.92□□□□□ -0.34
COL9A2-205ENST00000461118 F5H768 121 aa12.91□□□□□ -0.34
COL9A2-205ENST00000461118 SMLR1H3BR10 107 aa12.91□□□□□ -0.34
COL9A2-205ENST00000461118 IBA57Q5T440 356 aaKnown RBP12.91□□□□□ -0.34
COL9A2-205ENST00000461118 TMEM167BQ9NRX6 74 aa12.91□□□□□ -0.34
COL9A2-205ENST00000461118 IGHV1OR15-1A0A075B7D0 117 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 HMSDA8MTL9 139 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 M0R2N4 97 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 RGS13O14921 159 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 ZNF345Q14585 488 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 LGALS9BQ3B8N2 356 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 Q6AWC8 147 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 Q6ZQT7 251 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 GOLT1AQ6ZVE7 132 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 SSX7Q7RTT5 188 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 GSN-AS1Q9NRJ2 163 aa12.9□□□□□ -0.34
COL9A2-205ENST00000461118 SERTM2A0A1B0GWG4 89 aa12.89□□□□□ -0.35
COL9A2-205ENST00000461118 ZNF726P1Q15940 193 aa12.89□□□□□ -0.35
COL9A2-205ENST00000461118 RNF212Q495C1 297 aa12.89□□□□□ -0.35
COL9A2-205ENST00000461118 KCNRGQ8N5I3 272 aa12.89□□□□□ -0.35
COL9A2-205ENST00000461118 C5orf17Q8NAS9 161 aa12.89□□□□□ -0.35
COL9A2-205ENST00000461118 C18orf15Q96N68 181 aa12.89□□□□□ -0.35
COL9A2-205ENST00000461118 CTXND1A0A1B0GTU2 59 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 GAGE7O76087 117 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 TCL1AP56279 114 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 Q6ZR54 194 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 Q6ZTI0 123 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 OR11H4Q8NGC9 324 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 TP53TG3Q9ULZ0 132 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 RPH3ALQ9UNE2 315 aa12.88□□□□□ -0.35
COL9A2-205ENST00000461118 TCRAP04437 139 aa12.87□□□□□ -0.35
COL9A2-205ENST00000461118 SUMO1P63165 101 aaKnown RBP12.87□□□□□ -0.35
COL9A2-205ENST00000461118 GNG5P63218 68 aa12.87□□□□□ -0.35
COL9A2-205ENST00000461118 AKR1C8PQ5T2L2 129 aa12.87□□□□□ -0.35
COL9A2-205ENST00000461118 ZNF575Q86XF7 245 aa12.87□□□□□ -0.35
COL9A2-205ENST00000461118 TVP23CQ96ET8 276 aa12.87□□□□□ -0.35
COL9A2-205ENST00000461118 KLF12Q9Y4X4 402 aa12.87□□□□□ -0.35
COL9A2-205ENST00000461118 TRAV8-1A0A0A6YYK1 113 aa12.86□□□□□ -0.35
COL9A2-205ENST00000461118 A0A1W2PRE2 83 aa12.86□□□□□ -0.35
COL9A2-205ENST00000461118 GGTLC3B5MD39 225 aa12.86□□□□□ -0.35
COL9A2-205ENST00000461118 SPINK4O60575 86 aa12.86□□□□□ -0.35
COL9A2-205ENST00000461118 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
COL9A2-205ENST00000461118 EPDR1Q9UM22 224 aa12.86□□□□□ -0.35
COL9A2-205ENST00000461118 A0A0D9SG52 128 aa12.85□□□□□ -0.35
COL9A2-205ENST00000461118 K7EQM0 130 aa12.85□□□□□ -0.35
COL9A2-205ENST00000461118 TDRG1Q3Y452 100 aa12.85□□□□□ -0.35
COL9A2-205ENST00000461118 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
COL9A2-205ENST00000461118 HOXA5P20719 270 aa12.84□□□□□ -0.35
COL9A2-205ENST00000461118 OR5I1Q13606 314 aa12.84□□□□□ -0.35
COL9A2-205ENST00000461118 MUC21Q5SSG8 566 aa12.84□□□□□ -0.35
COL9A2-205ENST00000461118 FAM159AQ6UWV7 190 aa12.84□□□□□ -0.35
COL9A2-205ENST00000461118 UBE2DNLQ8IWF7 75 aa12.84□□□□□ -0.35
COL9A2-205ENST00000461118 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.36
COL9A2-205ENST00000461118 TRGV1A0A0A0MS02 117 aa12.83□□□□□ -0.36
COL9A2-205ENST00000461118 TRAV21A0A0B4J279 112 aa12.83□□□□□ -0.36
COL9A2-205ENST00000461118 FBLL1A6NHQ2 334 aaKnown RBP12.83□□□□□ -0.36
COL9A2-205ENST00000461118 H3BNG1 76 aa12.83□□□□□ -0.36
COL9A2-205ENST00000461118 IGLV2-11P01706 119 aa12.83□□□□□ -0.36
COL9A2-205ENST00000461118 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
COL9A2-205ENST00000461118 ZNF415Q09FC8 603 aa12.83□□□□□ -0.36
COL9A2-205ENST00000461118 TMPRSS5Q9H3S3 457 aa12.83□□□□□ -0.36
COL9A2-205ENST00000461118 TRAV26-1A0A087WT03 109 aa12.82□□□□□ -0.36
COL9A2-205ENST00000461118 NUDT3O95989 172 aa12.82□□□□□ -0.36
COL9A2-205ENST00000461118 SEC11BP0C7V7 166 aa12.82□□□□□ -0.36
COL9A2-205ENST00000461118 IQCF2Q8IXL9 164 aa12.82□□□□□ -0.36
COL9A2-205ENST00000461118 CYB561D1Q8N8Q1 229 aa12.82□□□□□ -0.36
COL9A2-205ENST00000461118 TMEM75Q8N9X5 138 aa12.82□□□□□ -0.36
COL9A2-205ENST00000461118 ATG101Q9BSB4 218 aa12.82□□□□□ -0.36
COL9A2-205ENST00000461118 NDFIP1Q9BT67 221 aa12.82□□□□□ -0.36
COL9A2-205ENST00000461118 NKX6-2Q9C056 277 aaPredicted RBP12.82□□□□□ -0.36
COL9A2-205ENST00000461118 MDFICQ9P1T7 246 aa12.82□□□□□ -0.36
COL9A2-205ENST00000461118 PSG8Q9UQ74 426 aa12.82□□□□□ -0.36
COL9A2-205ENST00000461118 IGLV2-18A0A075B6J9 118 aa12.81□□□□□ -0.36
COL9A2-205ENST00000461118 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
COL9A2-205ENST00000461118 FGF8P55075 233 aaPredicted RBP12.81□□□□□ -0.36
COL9A2-205ENST00000461118 SGK494Q96LW2 274 aa12.81□□□□□ -0.36
COL9A2-205ENST00000461118 SPXQ9BT56 116 aa12.81□□□□□ -0.36
COL9A2-205ENST00000461118 LRP1BQ9NZR2 4599 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms