RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 UBE2G2P60604 165 aa15.54■□□□□ 0.08
SSNA1-202ENST00000459860 DAD1P61803 113 aa15.54■□□□□ 0.08
SSNA1-202ENST00000459860 NDFIP1Q9BT67 221 aa15.54■□□□□ 0.08
SSNA1-202ENST00000459860 NKX6-2Q9C056 277 aaPredicted RBP15.54■□□□□ 0.08
SSNA1-202ENST00000459860 RGS13O14921 159 aa15.53■□□□□ 0.08
SSNA1-202ENST00000459860 IFNA7P01567 189 aa15.53■□□□□ 0.08
SSNA1-202ENST00000459860 FHITP49789 147 aa15.53■□□□□ 0.08
SSNA1-202ENST00000459860 RNASE8Q8TDE3 154 aaKnown RBP15.53■□□□□ 0.08
SSNA1-202ENST00000459860 EPDR1Q9UM22 224 aa15.53■□□□□ 0.08
SSNA1-202ENST00000459860 TIMM8BQ9Y5J9 83 aaPredicted RBP15.53■□□□□ 0.08
SSNA1-202ENST00000459860 DEFB131BA0A096LNP1 70 aa15.52■□□□□ 0.08
SSNA1-202ENST00000459860 SNURFLB1AK76 121 aa15.52■□□□□ 0.08
SSNA1-202ENST00000459860 PRR9Q5T870 116 aa15.52■□□□□ 0.08
SSNA1-202ENST00000459860 SLC51BQ86UW2 128 aa15.52■□□□□ 0.08
SSNA1-202ENST00000459860 CYB561D1Q8N8Q1 229 aa15.52■□□□□ 0.08
SSNA1-202ENST00000459860 ZNF680Q8NEM1 530 aa15.52■□□□□ 0.08
SSNA1-202ENST00000459860 SFT2D1Q8WV19 159 aa15.52■□□□□ 0.08
SSNA1-202ENST00000459860 ATG101Q9BSB4 218 aa15.52■□□□□ 0.08
SSNA1-202ENST00000459860 FBLL1A6NHQ2 334 aaKnown RBP15.51■□□□□ 0.07
SSNA1-202ENST00000459860 CBY3A6NI87 242 aa15.51■□□□□ 0.07
SSNA1-202ENST00000459860 ZNF324O75467 553 aaPredicted RBP15.51■□□□□ 0.07
SSNA1-202ENST00000459860 EIF4E3Q8N5X7 224 aaKnown RBP15.51■□□□□ 0.07
SSNA1-202ENST00000459860 LINC00467Q9BRT7 94 aa15.51■□□□□ 0.07
SSNA1-202ENST00000459860 TRAV8-1A0A0A6YYK1 113 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 A0A1B0GVG6 124 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 PLAC8L1A1L4L8 177 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 FAM74A7A6NL05 159 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 IGLL5B9A064 214 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 H2AFB1P0C5Y9 115 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 RAB5CP51148 216 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 TCTAP57738 103 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 MBD3L1Q8WWY6 194 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 TREM1Q9NP99 234 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 PLA2G2EQ9NZK7 142 aa15.5■□□□□ 0.07
SSNA1-202ENST00000459860 DEFB130BP0DP73 79 aa15.49■□□□□ 0.07
SSNA1-202ENST00000459860 DEFB130AP0DP74 79 aa15.49■□□□□ 0.07
SSNA1-202ENST00000459860 PPT1P50897 306 aa15.49■□□□□ 0.07
SSNA1-202ENST00000459860 TMEM75Q8N9X5 138 aa15.49■□□□□ 0.07
SSNA1-202ENST00000459860 NOP10Q9NPE3 64 aaKnown RBP15.49■□□□□ 0.07
SSNA1-202ENST00000459860 ARL2-SNX15V9GYD0 113 aa15.49■□□□□ 0.07
SSNA1-202ENST00000459860 IGHV1OR15-1A0A075B7D0 117 aa15.48■□□□□ 0.07
SSNA1-202ENST00000459860 A0A1B0GV50 99 aa15.48■□□□□ 0.07
SSNA1-202ENST00000459860 HTN3P15516 51 aa15.48■□□□□ 0.07
SSNA1-202ENST00000459860 ANXA2RQ3ZCQ2 193 aa15.48■□□□□ 0.07
SSNA1-202ENST00000459860 C9orf62Q8N4C0 152 aa15.48■□□□□ 0.07
SSNA1-202ENST00000459860 SGK494Q96LW2 274 aa15.48■□□□□ 0.07
SSNA1-202ENST00000459860 PSG8Q9UQ74 426 aa15.48■□□□□ 0.07
SSNA1-202ENST00000459860 F6UZH7 168 aa15.47■□□□□ 0.07
SSNA1-202ENST00000459860 TEX46H3BTG2 121 aa15.47■□□□□ 0.07
SSNA1-202ENST00000459860 PEX7O00628 323 aa15.47■□□□□ 0.07
SSNA1-202ENST00000459860 FLI1Q01543 452 aaPredicted RBP15.47■□□□□ 0.07
SSNA1-202ENST00000459860 CST9LP1Q5W188 147 aa15.47■□□□□ 0.07
SSNA1-202ENST00000459860 Q6AWC8 147 aa15.47■□□□□ 0.07
SSNA1-202ENST00000459860 HIST1H2BAQ96A08 127 aa15.47■□□□□ 0.07
SSNA1-202ENST00000459860 TCEAL7Q9BRU2 100 aa15.47■□□□□ 0.07
SSNA1-202ENST00000459860 FAM159AQ6UWV7 190 aa15.46■□□□□ 0.07
SSNA1-202ENST00000459860 IGHV4-4A0A075B6R2 117 aa15.45■□□□□ 0.06
SSNA1-202ENST00000459860 TRAV21A0A0B4J279 112 aa15.45■□□□□ 0.06
SSNA1-202ENST00000459860 PRNTQ86SH4 94 aa15.45■□□□□ 0.06
SSNA1-202ENST00000459860 SULT1A2P50226 295 aa15.44■□□□□ 0.06
SSNA1-202ENST00000459860 MUC21Q5SSG8 566 aa15.44■□□□□ 0.06
SSNA1-202ENST00000459860 SAPCD1Q5SSQ6 148 aa15.44■□□□□ 0.06
SSNA1-202ENST00000459860 IBA57Q5T440 356 aaKnown RBP15.44■□□□□ 0.06
SSNA1-202ENST00000459860 NAGKQ9UJ70 344 aa15.44■□□□□ 0.06
SSNA1-202ENST00000459860 PAGE4O60829 102 aa15.43■□□□□ 0.06
SSNA1-202ENST00000459860 ATP5G1P05496 136 aa15.43■□□□□ 0.06
SSNA1-202ENST00000459860 ATP5G3P48201 142 aa15.43■□□□□ 0.06
SSNA1-202ENST00000459860 ZNF415Q09FC8 603 aa15.43■□□□□ 0.06
SSNA1-202ENST00000459860 DAZ2Q13117 558 aaKnown RBP15.43■□□□□ 0.06
SSNA1-202ENST00000459860 Q6ZQT7 251 aa15.43■□□□□ 0.06
SSNA1-202ENST00000459860 LINC00476Q8WZB0 136 aa15.43■□□□□ 0.06
SSNA1-202ENST00000459860 TVP23CQ96ET8 276 aa15.43■□□□□ 0.06
SSNA1-202ENST00000459860 FAM210BQ96KR6 192 aa15.43■□□□□ 0.06
SSNA1-202ENST00000459860 NDUFAF3Q9BU61 184 aa15.43■□□□□ 0.06
SSNA1-202ENST00000459860 GSN-AS1Q9NRJ2 163 aa15.43■□□□□ 0.06
SSNA1-202ENST00000459860 TRGV11A0A075B6L2 103 aa15.42■□□□□ 0.06
SSNA1-202ENST00000459860 LY6G6CO95867 125 aa15.42■□□□□ 0.06
SSNA1-202ENST00000459860 IGLV2-11P01706 119 aa15.42■□□□□ 0.06
SSNA1-202ENST00000459860 UBE2G1P62253 170 aa15.42■□□□□ 0.06
SSNA1-202ENST00000459860 SMUG1Q53HV7 270 aa15.42■□□□□ 0.06
SSNA1-202ENST00000459860 C11orf72Q8NBR9 251 aa15.42■□□□□ 0.06
SSNA1-202ENST00000459860 TCL1AP56279 114 aa15.41■□□□□ 0.06
SSNA1-202ENST00000459860 MANBALQ9NQG1 85 aa15.41■□□□□ 0.06
SSNA1-202ENST00000459860 TP53TG3Q9ULZ0 132 aa15.41■□□□□ 0.06
SSNA1-202ENST00000459860 KMT2AQ03164 3969 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 FRAS1Q86XX4 4008 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 TRAV34A0A0B4J273 112 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 GAGE12BA1L429 117 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 GAGE7O76087 117 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 GCGP01275 180 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 GAGE12FP0CL80 117 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 GAGE12GP0CL81 117 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 GAGE12IP0CL82 117 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 AKR1C3P42330 323 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 Q86TA4 180 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 FMC1Q96HJ9 113 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 KCNS1Q96KK3 526 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 LINC00479Q96M42 142 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 C8orf49Q96NF6 230 aa15.4■□□□□ 0.06
SSNA1-202ENST00000459860 APLNQ9ULZ1 77 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms